RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 THYN1Q9P016 225 aa13.58□□□□□ -0.24
SGCE-206ENST00000445866 FBXL7Q9UJT9 491 aa13.58□□□□□ -0.24
SGCE-206ENST00000445866 IGLV11-55A0A075B6I3 123 aa13.57□□□□□ -0.24
SGCE-206ENST00000445866 TRAV14DV4A0A0A6YYC5 116 aa13.57□□□□□ -0.24
SGCE-206ENST00000445866 FAM24AA6NFZ4 105 aa13.57□□□□□ -0.24
SGCE-206ENST00000445866 C15orf62A8K5M9 175 aa13.57□□□□□ -0.24
SGCE-206ENST00000445866 SMLR1H3BR10 107 aa13.57□□□□□ -0.24
SGCE-206ENST00000445866 TSC22D2O75157 780 aa13.57□□□□□ -0.24
SGCE-206ENST00000445866 NDUFB8O95169 186 aa13.57□□□□□ -0.24
SGCE-206ENST00000445866 BRI3O95415 125 aa13.57□□□□□ -0.24
SGCE-206ENST00000445866 OR8U8P0C7N1 319 aa13.57□□□□□ -0.24
SGCE-206ENST00000445866 NECAP1Q8NC96 275 aa13.57□□□□□ -0.24
SGCE-206ENST00000445866 WIPF2Q8TF74 440 aaPredicted RBP13.57□□□□□ -0.24
SGCE-206ENST00000445866 PINX1Q96BK5 328 aaKnown RBP13.57□□□□□ -0.24
SGCE-206ENST00000445866 MBD2Q9UBB5 411 aa13.57□□□□□ -0.24
SGCE-206ENST00000445866 PLXNB1O43157 2135 aa13.57□□□□□ -0.24
SGCE-206ENST00000445866 TRBV9A0A0B4J1U6 114 aa13.56□□□□□ -0.24
SGCE-206ENST00000445866 RPLP1P05386 114 aaKnown RBP13.56□□□□□ -0.24
SGCE-206ENST00000445866 CD28P10747 220 aa13.56□□□□□ -0.24
SGCE-206ENST00000445866 ATP5G2Q06055 141 aa13.56□□□□□ -0.24
SGCE-206ENST00000445866 TCTEX1D4Q5JR98 221 aa13.56□□□□□ -0.24
SGCE-206ENST00000445866 ETV3LQ6ZN32 361 aa13.56□□□□□ -0.24
SGCE-206ENST00000445866 IGHV3-21A0A0B4J1V1 117 aa13.56□□□□□ -0.24
SGCE-206ENST00000445866 TCRBV4S1A1TA0A5B7 111 aa13.56□□□□□ -0.24
SGCE-206ENST00000445866 METTL15P1P0C7V9 234 aa13.56□□□□□ -0.24
SGCE-206ENST00000445866 P2RY1P47900 373 aa13.56□□□□□ -0.24
SGCE-206ENST00000445866 DEFA5Q01523 94 aa13.56□□□□□ -0.24
SGCE-206ENST00000445866 MLANAQ16655 118 aa13.56□□□□□ -0.24
SGCE-206ENST00000445866 RNASEH2CQ8TDP1 164 aaKnown RBP13.56□□□□□ -0.24
SGCE-206ENST00000445866 DCUN1D4Q92564 292 aa13.56□□□□□ -0.24
SGCE-206ENST00000445866 A0A0G2JLM5 398 aa13.55□□□□□ -0.24
SGCE-206ENST00000445866 SLC25A4P12235 298 aa13.55□□□□□ -0.24
SGCE-206ENST00000445866 KLK9Q2XQG4 91 aa13.55□□□□□ -0.24
SGCE-206ENST00000445866 PVRIGQ6DKI7 326 aa13.55□□□□□ -0.24
SGCE-206ENST00000445866 HIST2H2BDQ6DRA6 164 aa13.55□□□□□ -0.24
SGCE-206ENST00000445866 OR8G2PQ6IF36 304 aa13.55□□□□□ -0.24
SGCE-206ENST00000445866 TMEM14EPQ6UXP3 125 aa13.55□□□□□ -0.24
SGCE-206ENST00000445866 RNF152Q8N8N0 203 aa13.55□□□□□ -0.24
SGCE-206ENST00000445866 USMG5Q96IX5 58 aa13.55□□□□□ -0.24
SGCE-206ENST00000445866 LYRM2Q9NU23 88 aaPredicted RBP13.55□□□□□ -0.24
SGCE-206ENST00000445866 KLK9Q9UKQ9 250 aa13.55□□□□□ -0.24
SGCE-206ENST00000445866 FXYD6-FXYD2A0A087WZ82 144 aa13.54□□□□□ -0.24
SGCE-206ENST00000445866 FAM223BA6NKX1 122 aa13.54□□□□□ -0.24
SGCE-206ENST00000445866 CORTO00230 105 aa13.54□□□□□ -0.24
SGCE-206ENST00000445866 CST7O76096 145 aa13.54□□□□□ -0.24
SGCE-206ENST00000445866 MT-CO2P00403 227 aa13.54□□□□□ -0.24
SGCE-206ENST00000445866 IGHV3-48P01763 117 aa13.54□□□□□ -0.24
SGCE-206ENST00000445866 LYL1P12980 280 aa13.54□□□□□ -0.24
SGCE-206ENST00000445866 KRTAP10-3P60369 221 aa13.54□□□□□ -0.24
SGCE-206ENST00000445866 KIAA0141Q14154 515 aaPredicted RBP13.54□□□□□ -0.24
SGCE-206ENST00000445866 C15orf32Q32M92 178 aa13.54□□□□□ -0.24
SGCE-206ENST00000445866 ZNF546Q86UE3 836 aa13.54□□□□□ -0.24
SGCE-206ENST00000445866 FAM223AQ8IWN6 122 aa13.54□□□□□ -0.24
SGCE-206ENST00000445866 TMEM252Q8N6L7 170 aa13.54□□□□□ -0.24
SGCE-206ENST00000445866 SLC25A31Q9H0C2 315 aa13.54□□□□□ -0.24
SGCE-206ENST00000445866 I3L2K1 104 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 OPRK1P41145 380 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 RIPPLY3P57055 190 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 EXOSC2Q13868 293 aaKnown RBP13.53□□□□□ -0.24
SGCE-206ENST00000445866 KHDC1LQ5JSQ8 128 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 TCTE3Q8IZS6 198 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 ZNF491Q8N8L2 437 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 OR10P1Q8NGE3 313 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 NEURL2Q9BR09 285 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 ZC4H2Q9NQZ6 224 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 S4R3C0 116 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 IGSF23A1L1A6 192 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 K7EIM0 57 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 IGHV3-11P01762 117 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 RPL12P30050 165 aaKnown RBP13.53□□□□□ -0.24
SGCE-206ENST00000445866 NUP62P37198 522 aaPredicted RBP13.53□□□□□ -0.24
SGCE-206ENST00000445866 TMEM217Q8N7C4 229 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 SCARB1Q8WTV0 552 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 WFDC12Q8WWY7 111 aa13.53□□□□□ -0.24
SGCE-206ENST00000445866 CITED2Q99967 270 aaPredicted RBP13.53□□□□□ -0.24
SGCE-206ENST00000445866 RPS10-NUDT3A0A1W2PQS6 291 aa13.52□□□□□ -0.25
SGCE-206ENST00000445866 G3V3Q6 166 aa13.52□□□□□ -0.25
SGCE-206ENST00000445866 PFDN1O60925 122 aa13.52□□□□□ -0.25
SGCE-206ENST00000445866 IGHV3-23P01764 117 aa13.52□□□□□ -0.25
SGCE-206ENST00000445866 GPX4P36969 197 aaPredicted RBP13.52□□□□□ -0.25
SGCE-206ENST00000445866 NHLH2Q02577 135 aa13.52□□□□□ -0.25
SGCE-206ENST00000445866 CD300CQ08708 224 aa13.52□□□□□ -0.25
SGCE-206ENST00000445866 STX12Q86Y82 276 aa13.52□□□□□ -0.25
SGCE-206ENST00000445866 INO80EQ8NBZ0 244 aaPredicted RBP13.52□□□□□ -0.25
SGCE-206ENST00000445866 VN1R17PQ8TDU5 208 aa13.52□□□□□ -0.25
SGCE-206ENST00000445866 CXorf58Q96LI9 332 aa13.52□□□□□ -0.25
SGCE-206ENST00000445866 UBE2E2Q96LR5 201 aa13.52□□□□□ -0.25
SGCE-206ENST00000445866 OR5B12Q96R08 314 aa13.52□□□□□ -0.25
SGCE-206ENST00000445866 FNDC4Q9H6D8 234 aaPredicted RBP13.52□□□□□ -0.25
SGCE-206ENST00000445866 MFSD2BA6NFX1 497 aa13.51□□□□□ -0.25
SGCE-206ENST00000445866 CDX1P47902 265 aaPredicted RBP13.51□□□□□ -0.25
SGCE-206ENST00000445866 SULT1A1P50225 295 aa13.51□□□□□ -0.25
SGCE-206ENST00000445866 ARL16Q0P5N6 197 aa13.51□□□□□ -0.25
SGCE-206ENST00000445866 ETFRF1Q6IPR1 90 aa13.51□□□□□ -0.25
SGCE-206ENST00000445866 C12orf54Q6X4T0 127 aa13.51□□□□□ -0.25
SGCE-206ENST00000445866 MYOZ3Q8TDC0 251 aa13.51□□□□□ -0.25
SGCE-206ENST00000445866 CACNG8Q8WXS5 425 aa13.51□□□□□ -0.25
SGCE-206ENST00000445866 EEF1AKMT3Q96AZ1 226 aa13.51□□□□□ -0.25
SGCE-206ENST00000445866 TSSC4Q9Y5U2 329 aaPredicted RBP13.51□□□□□ -0.25
SGCE-206ENST00000445866 A0A1W2PRX2 142 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms