RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 SPANXN2Q5MJ10 180 aa14.18□□□□□ -0.14
HDAC4-203ENST00000445704 SBSPONQ8IVN8 264 aa14.18□□□□□ -0.14
HDAC4-203ENST00000445704 FAM219AQ8IW50 185 aa14.18□□□□□ -0.14
HDAC4-203ENST00000445704 SGPP2Q8IWX5 399 aa14.18□□□□□ -0.14
HDAC4-203ENST00000445704 SCGB3A2Q96PL1 93 aa14.18□□□□□ -0.14
HDAC4-203ENST00000445704 PDCD10Q9BUL8 212 aa14.18□□□□□ -0.14
HDAC4-203ENST00000445704 MLXQ9UH92 298 aa14.18□□□□□ -0.14
HDAC4-203ENST00000445704 ZNF785A8K8V0 405 aa14.17□□□□□ -0.14
HDAC4-203ENST00000445704 MT-CO2P00403 227 aa14.17□□□□□ -0.14
HDAC4-203ENST00000445704 IGHV3-48P01763 117 aa14.17□□□□□ -0.14
HDAC4-203ENST00000445704 IGHV4-30-4P0DP06 118 aa14.17□□□□□ -0.14
HDAC4-203ENST00000445704 HOXA1P49639 335 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-203ENST00000445704 Q56UQ5 140 aa14.17□□□□□ -0.14
HDAC4-203ENST00000445704 UXS1Q8NBZ7 420 aa14.17□□□□□ -0.14
HDAC4-203ENST00000445704 TMEM190Q8WZ59 177 aa14.17□□□□□ -0.14
HDAC4-203ENST00000445704 PINX1Q96BK5 328 aaKnown RBP14.17□□□□□ -0.14
HDAC4-203ENST00000445704 ATP6V0BQ99437 205 aa14.17□□□□□ -0.14
HDAC4-203ENST00000445704 CACNG5Q9UF02 275 aa14.17□□□□□ -0.14
HDAC4-203ENST00000445704 CTSGP08311 255 aa14.16□□□□□ -0.14
HDAC4-203ENST00000445704 NHLRC4P0CG21 123 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-203ENST00000445704 RNASE2P10153 161 aaKnown RBP14.16□□□□□ -0.14
HDAC4-203ENST00000445704 BAK1Q16611 211 aa14.16□□□□□ -0.14
HDAC4-203ENST00000445704 PVRIGQ6DKI7 326 aa14.16□□□□□ -0.14
HDAC4-203ENST00000445704 SPSB3Q6PJ21 355 aa14.16□□□□□ -0.14
HDAC4-203ENST00000445704 IL22RA2Q969J5 263 aa14.16□□□□□ -0.14
HDAC4-203ENST00000445704 WDR89Q96FK6 387 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-203ENST00000445704 TECRQ9NZ01 308 aaKnown RBP14.16□□□□□ -0.14
HDAC4-203ENST00000445704 KCNIP3Q9Y2W7 256 aa14.16□□□□□ -0.14
HDAC4-203ENST00000445704 IGHV3OR16-8A0A075B7F1 116 aa14.15□□□□□ -0.14
HDAC4-203ENST00000445704 SNCAP37840 140 aa14.15□□□□□ -0.14
HDAC4-203ENST00000445704 BTNL8Q6UX41 500 aa14.15□□□□□ -0.14
HDAC4-203ENST00000445704 TMED4Q7Z7H5 227 aa14.15□□□□□ -0.14
HDAC4-203ENST00000445704 TMEM61Q8N0U2 210 aa14.15□□□□□ -0.14
HDAC4-203ENST00000445704 SDHCQ99643 169 aaPredicted RBP14.15□□□□□ -0.14
HDAC4-203ENST00000445704 PALMDQ9NP74 551 aa14.15□□□□□ -0.14
HDAC4-203ENST00000445704 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.15□□□□□ -0.14
HDAC4-203ENST00000445704 C19orf73Q9NVV2 129 aa14.15□□□□□ -0.14
HDAC4-203ENST00000445704 UFC1Q9Y3C8 167 aa14.15□□□□□ -0.14
HDAC4-203ENST00000445704 A8MZ25 164 aa14.14□□□□□ -0.15
HDAC4-203ENST00000445704 NDUFA4O00483 81 aa14.14□□□□□ -0.15
HDAC4-203ENST00000445704 C8orf88P0DMB2 117 aa14.14□□□□□ -0.15
HDAC4-203ENST00000445704 FCGR2BP31994 310 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-203ENST00000445704 MFAP4P55083 255 aa14.14□□□□□ -0.15
HDAC4-203ENST00000445704 ELLP55199 621 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-203ENST00000445704 SPCS3P61009 180 aa14.14□□□□□ -0.15
HDAC4-203ENST00000445704 BSXQ3C1V8 233 aa14.14□□□□□ -0.15
HDAC4-203ENST00000445704 ZNF57Q68EA5 555 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-203ENST00000445704 GTSCR1Q86UQ5 136 aa14.14□□□□□ -0.15
HDAC4-203ENST00000445704 OR52E5Q8NH55 327 aa14.14□□□□□ -0.15
HDAC4-203ENST00000445704 DEDD2Q8WXF8 326 aa14.14□□□□□ -0.15
HDAC4-203ENST00000445704 NDUFA13Q9P0J0 144 aa14.14□□□□□ -0.15
HDAC4-203ENST00000445704 HUWE1Q7Z6Z7 4374 aaKnown RBP14.14□□□□□ -0.15
HDAC4-203ENST00000445704 NXPH3O95157 252 aa14.13□□□□□ -0.15
HDAC4-203ENST00000445704 CD7P09564 240 aa14.13□□□□□ -0.15
HDAC4-203ENST00000445704 GUCA2BQ16661 112 aa14.13□□□□□ -0.15
HDAC4-203ENST00000445704 NMSQ5H8A3 153 aa14.13□□□□□ -0.15
HDAC4-203ENST00000445704 LYZL2Q7Z4W2 148 aa14.13□□□□□ -0.15
HDAC4-203ENST00000445704 MARC2Q969Z3 335 aa14.13□□□□□ -0.15
HDAC4-203ENST00000445704 TXN2Q99757 166 aa14.13□□□□□ -0.15
HDAC4-203ENST00000445704 ENY2Q9NPA8 101 aa14.13□□□□□ -0.15
HDAC4-203ENST00000445704 MRPL27Q9P0M9 148 aaKnown RBP14.13□□□□□ -0.15
HDAC4-203ENST00000445704 U3KQK5 164 aa14.13□□□□□ -0.15
HDAC4-203ENST00000445704 CD81P60033 236 aa14.12□□□□□ -0.15
HDAC4-203ENST00000445704 SLC25A21Q9BQT8 299 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-203ENST00000445704 NEURL2Q9BR09 285 aa14.12□□□□□ -0.15
HDAC4-203ENST00000445704 C20orf24Q9BUV8 137 aa14.12□□□□□ -0.15
HDAC4-203ENST00000445704 WFDC10AQ9H1F0 79 aa14.12□□□□□ -0.15
HDAC4-203ENST00000445704 FNDC4Q9H6D8 234 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-203ENST00000445704 DAZ1Q9NQZ3 744 aaKnown RBP14.12□□□□□ -0.15
HDAC4-203ENST00000445704 GAR1Q9NY12 217 aaKnown RBP14.12□□□□□ -0.15
HDAC4-203ENST00000445704 MRPL36Q9P0J6 103 aaKnown RBP14.12□□□□□ -0.15
HDAC4-203ENST00000445704 A0A0B4J2A0 478 aa14.11□□□□□ -0.15
HDAC4-203ENST00000445704 NUPL2O15504 423 aaKnown RBP14.11□□□□□ -0.15
HDAC4-203ENST00000445704 ZNF207O43670 478 aaKnown RBP14.11□□□□□ -0.15
HDAC4-203ENST00000445704 GNG7O60262 68 aa14.11□□□□□ -0.15
HDAC4-203ENST00000445704 SULT1A3P0DMM9 295 aa14.11□□□□□ -0.15
HDAC4-203ENST00000445704 SULT1A4P0DMN0 295 aa14.11□□□□□ -0.15
HDAC4-203ENST00000445704 ANXA3P12429 323 aa14.11□□□□□ -0.15
HDAC4-203ENST00000445704 CCR6P51684 374 aa14.11□□□□□ -0.15
HDAC4-203ENST00000445704 TMEM128Q5BJH2 165 aa14.11□□□□□ -0.15
HDAC4-203ENST00000445704 LGI3Q8N145 548 aa14.11□□□□□ -0.15
HDAC4-203ENST00000445704 SHPKQ9UHJ6 478 aa14.11□□□□□ -0.15
HDAC4-203ENST00000445704 SCAF4O95104 1147 aaKnown RBP14.1□□□□□ -0.15
HDAC4-203ENST00000445704 SUB1P53999 127 aaKnown RBP eCLIP14.1□□□□□ -0.15
HDAC4-203ENST00000445704 RELQ04864 619 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-203ENST00000445704 MLANAQ16655 118 aa14.1□□□□□ -0.15
HDAC4-203ENST00000445704 ANKRD55Q3KP44 614 aa14.1□□□□□ -0.15
HDAC4-203ENST00000445704 TRIQKQ629K1 86 aa14.1□□□□□ -0.15
HDAC4-203ENST00000445704 HEYLQ9NQ87 328 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-203ENST00000445704 LINC00854A0A1B0GVQ3 168 aa14.09□□□□□ -0.15
HDAC4-203ENST00000445704 CEBPZOSA8MTT3 80 aa14.09□□□□□ -0.15
HDAC4-203ENST00000445704 CORTO00230 105 aa14.09□□□□□ -0.15
HDAC4-203ENST00000445704 VAMP1P23763 118 aa14.09□□□□□ -0.15
HDAC4-203ENST00000445704 INPP1P49441 399 aa14.09□□□□□ -0.15
HDAC4-203ENST00000445704 SRPXP78539 464 aa14.09□□□□□ -0.15
HDAC4-203ENST00000445704 PPP1R1AQ13522 171 aa14.09□□□□□ -0.15
HDAC4-203ENST00000445704 SMCO1Q147U7 214 aa14.09□□□□□ -0.15
HDAC4-203ENST00000445704 DUSP18Q8NEJ0 188 aa14.09□□□□□ -0.15
HDAC4-203ENST00000445704 TMEM170AQ8WVE7 144 aa14.09□□□□□ -0.15
HDAC4-203ENST00000445704 C15orf62A8K5M9 175 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms