RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 TEPPQ6URK8 271 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 CENPVQ7Z7K6 275 aaPredicted RBP13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 RNASE8Q8TDE3 154 aaKnown RBP13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 NABP2Q9BQ15 211 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 CENPEQ02224 2701 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 SOD3P08294 240 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 AGAP20933 346 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 RPL29P47914 159 aaKnown RBP13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 RPL8P62917 257 aaKnown RBP13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 WDR25Q64LD2 544 aaPredicted RBP13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 OR9G1Q8NH87 305 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 OR2T6Q8NHC8 308 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 GAB2Q9UQC2 676 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 CD24P25063 80 aa13.62□□□□□ -0.23
LAPTM4B-201ENST00000445593 PRCDQ00LT1 54 aa13.62□□□□□ -0.23
LAPTM4B-201ENST00000445593 LHFPL4Q7Z7J7 247 aa13.62□□□□□ -0.23
LAPTM4B-201ENST00000445593 SNHG12Q9BXW3 62 aa13.62□□□□□ -0.23
LAPTM4B-201ENST00000445593 TNFRSF13BO14836 293 aaPredicted RBP13.62□□□□□ -0.23
LAPTM4B-201ENST00000445593 NDUFS7O75251 213 aa13.62□□□□□ -0.23
LAPTM4B-201ENST00000445593 HCP5Q6MZN7 132 aa13.62□□□□□ -0.23
LAPTM4B-201ENST00000445593 CDKN1AP38936 164 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 ZNF430Q9H8G1 570 aaPredicted RBP13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 IGKV1OR2-108A0A075B7D4 117 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 ARF6P62330 175 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 ELOBQ15370 118 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 FAM78BQ5VT40 261 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 C11orf42Q8N5U0 333 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 OR4P4Q8NGL7 312 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 TMEM133Q9H2Q1 129 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 PPIAL4CA0A0B4J2A2 164 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 DLEU1O43261 78 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 PPIAL4GP0DN37 164 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 TFPI2P48307 235 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 SSBP2P81877 361 aaPredicted RBP13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 EFNB3Q15768 340 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 OR4C13Q8NGP0 309 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 SDF2L1Q9HCN8 221 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 RNF24Q9Y225 148 aa13.61□□□□□ -0.23
LAPTM4B-201ENST00000445593 CELSR1Q9NYQ6 3014 aa13.6□□□□□ -0.23
LAPTM4B-201ENST00000445593 OR10J1P30954 320 aa13.6□□□□□ -0.23
LAPTM4B-201ENST00000445593 OR5AN1Q8NGI8 311 aa13.6□□□□□ -0.23
LAPTM4B-201ENST00000445593 FAM208BQ5VWN6 2430 aa13.6□□□□□ -0.23
LAPTM4B-201ENST00000445593 NDUFB4O95168 129 aa13.6□□□□□ -0.23
LAPTM4B-201ENST00000445593 NPPCP23582 126 aa13.6□□□□□ -0.23
LAPTM4B-201ENST00000445593 DLX6P56179 175 aa13.6□□□□□ -0.23
LAPTM4B-201ENST00000445593 VPS13CQ709C8 3753 aa13.6□□□□□ -0.23
LAPTM4B-201ENST00000445593 IGHV2-26A0A0B4J1V2 119 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 OPRK1P41145 380 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 MIR17HGQ75NE6 70 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 OSR1Q8TAX0 266 aaPredicted RBP13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 CRYBG3Q68DQ2 2970 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 UTP20O75691 2785 aaKnown RBP13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 PPP1R2P9O14990 202 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 OR10J4P0C629 311 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 WT1-ASQ06250 92 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 TMEM241Q24JQ0 296 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 PNKDQ8N490 385 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 WASHC3Q9Y3C0 194 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 HILPDAQ9Y5L2 63 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 A0A0U1RQK1 487 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 PPOXP50336 477 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 KLRD1Q13241 179 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 SSX8Q7RTT4 187 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 BET1LQ9NYM9 111 aa13.59□□□□□ -0.23
LAPTM4B-201ENST00000445593 TGOLN2O43493 480 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 RNASE2P10153 161 aaKnown RBP13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 CHRNA7P36544 502 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 CDX1P47902 265 aaPredicted RBP13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 TNXAQ16473 311 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 C16orf82Q7Z2V1 217 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 TMEM186Q96B77 213 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 NEIL1Q96FI4 390 aaPredicted RBP13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 LSM4Q9Y4Z0 139 aaKnown RBP13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 A0A1W2PPR1 153 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 C22orf46C9J442 243 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 RAB4AP20338 218 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 RAB31Q13636 194 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 POU2AF1Q16633 256 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 ZNF705AQ6ZN79 300 aaPredicted RBP13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 ZNF664Q8N3J9 261 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 OR1L8Q8NGR8 309 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 P2RX4Q99571 388 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 TUBA4BQ9H853 241 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 KAAG1Q9UBP8 84 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 INSIG2Q9Y5U4 225 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 IGSF10Q6WRI0 2623 aa13.58□□□□□ -0.24
LAPTM4B-201ENST00000445593 RPL23P62829 140 aaKnown RBP13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 ST6GALNAC6Q969X2 333 aa13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 ERHP84090 104 aaKnown RBP13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 OR5I1Q13606 314 aa13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 BSXQ3C1V8 233 aa13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 ZNF841Q6ZN19 808 aa13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 MANBALQ9NQG1 85 aa13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 NAT8Q9UHE5 227 aa13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 USP9XQ93008 2570 aaPredicted RBP13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 SCO2A0A1W2PP80 73 aa13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 OR7C2O60412 319 aa13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 MPDU1O75352 247 aa13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 TRGC2P03986 189 aa13.57□□□□□ -0.24
LAPTM4B-201ENST00000445593 HOXA5P20719 270 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms