RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 TENM1Q9UKZ4 2725 aa11.78□□□□□ -0.52
CCNE1-203ENST00000444983 HMSDA8MTL9 139 aa11.78□□□□□ -0.52
CCNE1-203ENST00000444983 CAV2P51636 162 aa11.78□□□□□ -0.52
CCNE1-203ENST00000444983 SLC35B1P78383 322 aa11.78□□□□□ -0.52
CCNE1-203ENST00000444983 KIAA0141Q14154 515 aaPredicted RBP11.78□□□□□ -0.52
CCNE1-203ENST00000444983 CENPVQ7Z7K6 275 aaPredicted RBP11.78□□□□□ -0.52
CCNE1-203ENST00000444983 ZNF546Q86UE3 836 aa11.78□□□□□ -0.52
CCNE1-203ENST00000444983 NOXA1Q86UR1 476 aa11.78□□□□□ -0.52
CCNE1-203ENST00000444983 MYOZ3Q8TDC0 251 aa11.78□□□□□ -0.52
CCNE1-203ENST00000444983 RNASEH2CQ8TDP1 164 aaKnown RBP11.78□□□□□ -0.52
CCNE1-203ENST00000444983 DCUN1D4Q92564 292 aa11.78□□□□□ -0.52
CCNE1-203ENST00000444983 SLA2Q9H6Q3 261 aa11.78□□□□□ -0.52
CCNE1-203ENST00000444983 RNF114Q9Y508 228 aa11.78□□□□□ -0.52
CCNE1-203ENST00000444983 A0A1B0GUS0 222 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 RNF222A6NCQ9 220 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 I3L2K1 104 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 PFDN1O60925 122 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 ELANEP08246 267 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 METTL15P1P0C7V9 234 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 HIST1H1BP16401 226 aaKnown RBP11.77□□□□□ -0.53
CCNE1-203ENST00000444983 SULT1A1P50225 295 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 RAB9AP51151 201 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 ARL16Q0P5N6 197 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 FOXE3Q13461 319 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 KRTAP24-1Q3LI83 254 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 TCTEX1D4Q5JR98 221 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 SLC25A24Q6NUK1 477 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 AQP10Q96PS8 301 aa11.77□□□□□ -0.53
CCNE1-203ENST00000444983 FNDC4Q9H6D8 234 aaPredicted RBP11.77□□□□□ -0.53
CCNE1-203ENST00000444983 K7EIM0 57 aa11.76□□□□□ -0.53
CCNE1-203ENST00000444983 CORTO00230 105 aa11.76□□□□□ -0.53
CCNE1-203ENST00000444983 RPL12P30050 165 aaKnown RBP11.76□□□□□ -0.53
CCNE1-203ENST00000444983 RAB11AP62491 216 aa11.76□□□□□ -0.53
CCNE1-203ENST00000444983 NHLH2Q02577 135 aa11.76□□□□□ -0.53
CCNE1-203ENST00000444983 ETV3LQ6ZN32 361 aa11.76□□□□□ -0.53
CCNE1-203ENST00000444983 COMMD1Q8N668 190 aa11.76□□□□□ -0.53
CCNE1-203ENST00000444983 NECAP1Q8NC96 275 aa11.76□□□□□ -0.53
CCNE1-203ENST00000444983 OR5AU1Q8NGC0 362 aa11.76□□□□□ -0.53
CCNE1-203ENST00000444983 MS4A10Q96PG2 267 aa11.76□□□□□ -0.53
CCNE1-203ENST00000444983 FXYD6-FXYD2A0A087WZ82 144 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 NDUFB8O95169 186 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 OR8U8P0C7N1 319 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 RHOGP84095 191 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 EWSR1Q01844 656 aaKnown RBP eCLIP11.75□□□□□ -0.53
CCNE1-203ENST00000444983 CD69Q07108 199 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 FOXL1Q12952 345 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 MLANAQ16655 118 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 SLC25A31Q9H0C2 315 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 THYN1Q9P016 225 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 CYB5BO43169 146 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 OR2J3O76001 311 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 CST7O76096 145 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 IFNA4P05014 189 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 GPX4P36969 197 aaPredicted RBP11.75□□□□□ -0.53
CCNE1-203ENST00000444983 BAXQ07812 192 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 EXOSC2Q13868 293 aaKnown RBP11.75□□□□□ -0.53
CCNE1-203ENST00000444983 LCNL1Q6ZST4 164 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 SCARB1Q8WTV0 552 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 BSCL2Q96G97 398 aaPredicted RBP11.75□□□□□ -0.53
CCNE1-203ENST00000444983 HYLS1Q96M11 299 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 ZNF355PQ9NSJ1 428 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 FBXL7Q9UJT9 491 aa11.75□□□□□ -0.53
CCNE1-203ENST00000444983 FAM223BA6NKX1 122 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 ARPC5O15511 151 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 MT-CO2P00403 227 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 TRGV3P03979 118 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 PF4V1P10720 104 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 C15orf32Q32M92 178 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 OR8G2PQ6IF36 304 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 ACOT7LQ6ZUV0 252 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 STX12Q86Y82 276 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 FAM223AQ8IWN6 122 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 OR10P1Q8NGE3 313 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 CACNG8Q8WXS5 425 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 MISP3Q96FF7 219 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 HSPB11Q9Y547 144 aa11.74□□□□□ -0.53
CCNE1-203ENST00000444983 MFSD2BA6NFX1 497 aa11.73□□□□□ -0.53
CCNE1-203ENST00000444983 ATP6V1G1O75348 118 aa11.73□□□□□ -0.53
CCNE1-203ENST00000444983 SCAF4O95104 1147 aaKnown RBP11.73□□□□□ -0.53
CCNE1-203ENST00000444983 RPLP1P05386 114 aaKnown RBP11.73□□□□□ -0.53
CCNE1-203ENST00000444983 TPPP2P59282 170 aa11.73□□□□□ -0.53
CCNE1-203ENST00000444983 KRTAP10-3P60369 221 aa11.73□□□□□ -0.53
CCNE1-203ENST00000444983 DEFA5Q01523 94 aa11.73□□□□□ -0.53
CCNE1-203ENST00000444983 ZNF345Q14585 488 aa11.73□□□□□ -0.53
CCNE1-203ENST00000444983 ZFP69Q49AA0 526 aa11.73□□□□□ -0.53
CCNE1-203ENST00000444983 ZNF491Q8N8L2 437 aa11.73□□□□□ -0.53
CCNE1-203ENST00000444983 INO80EQ8NBZ0 244 aaPredicted RBP11.73□□□□□ -0.53
CCNE1-203ENST00000444983 VN1R17PQ8TDU5 208 aa11.73□□□□□ -0.53
CCNE1-203ENST00000444983 USMG5Q96IX5 58 aa11.73□□□□□ -0.53
CCNE1-203ENST00000444983 GGACTQ9BVM4 153 aa11.73□□□□□ -0.53
CCNE1-203ENST00000444983 MRPL36Q9P0J6 103 aaKnown RBP11.73□□□□□ -0.53
CCNE1-203ENST00000444983 PAIP2BQ9ULR5 123 aaKnown RBP11.73□□□□□ -0.53
CCNE1-203ENST00000444983 F8W735 103 aaPredicted RBP11.72□□□□□ -0.53
CCNE1-203ENST00000444983 CXCL2P19875 107 aa11.72□□□□□ -0.53
CCNE1-203ENST00000444983 S100A11P31949 105 aa11.72□□□□□ -0.53
CCNE1-203ENST00000444983 FCGR2BP31994 310 aaPredicted RBP11.72□□□□□ -0.53
CCNE1-203ENST00000444983 OPRK1P41145 380 aa11.72□□□□□ -0.53
CCNE1-203ENST00000444983 VWC2Q2TAL6 325 aa11.72□□□□□ -0.53
CCNE1-203ENST00000444983 TMEM217Q8N7C4 229 aa11.72□□□□□ -0.53
CCNE1-203ENST00000444983 TMEM116Q8NCL8 245 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms