RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ZMAT4Q9H898 229 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 EDA2RQ9HAV5 297 aa8.16□□□□□ -1.1
SF3A1-203ENST00000444440 TENM2Q9NT68 2774 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 IGHV3OR16-8A0A075B7F1 116 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 PIGBOS1A0A0B4J2F0 54 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 A0A0G2JRQ6 117 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 TGOLN2O43493 480 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 IGKV1-5P01602 117 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 P0C879 139 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 C8orf88P0DMB2 117 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 UCP1P25874 307 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 ADMP35318 185 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 HSPE1P61604 102 aaKnown RBP8.15□□□□□ -1.1
SF3A1-203ENST00000444440 ERHP84090 104 aaKnown RBP8.15□□□□□ -1.1
SF3A1-203ENST00000444440 GUCA2BQ16661 112 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 SPINK9Q5DT21 86 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 CASC10Q5T4H9 136 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 VN1R17PQ8TDU5 208 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 SCARB1Q8WTV0 552 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 CITED4Q96RK1 184 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 FAM110AQ9BQ89 295 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 PDCD10Q9BUL8 212 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 TMEM222Q9H0R3 208 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 NAA60Q9H7X0 242 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 V9GYH0 126 aa8.15□□□□□ -1.1
SF3A1-203ENST00000444440 CRYM-AS1A6NIL9 109 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 C3orf84H3BNL1 204 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 SCAF4O95104 1147 aaKnown RBP8.14□□□□□ -1.11
SF3A1-203ENST00000444440 CDS2O95674 445 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 IFNA17P01571 189 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 IGHV3-48P01763 117 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 KLF9Q13886 244 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-203ENST00000444440 ZNF79Q15937 498 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 FAM106AQ4KMX7 169 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 ZNF57Q68EA5 555 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-203ENST00000444440 PLET1Q6UQ28 207 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 FAM219AQ8IW50 185 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 TMEM190Q8WZ59 177 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 C5orf66Q9H5L9 145 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 TUBA4BQ9H853 241 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 SRD5A3Q9H8P0 318 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 ENY2Q9NPA8 101 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 TECRQ9NZ01 308 aaKnown RBP8.14□□□□□ -1.11
SF3A1-203ENST00000444440 CACFD1Q9UGQ2 172 aa8.14□□□□□ -1.11
SF3A1-203ENST00000444440 OR11H12B2RN74 326 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 I3L2K1 104 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 ZNF207O43670 478 aaKnown RBP8.13□□□□□ -1.11
SF3A1-203ENST00000444440 OR5AC1P0C628 307 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 ANXA3P12429 323 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 AKR1C4P17516 323 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 SNCAP37840 140 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 SUB1P53999 127 aaKnown RBP eCLIP8.13□□□□□ -1.11
SF3A1-203ENST00000444440 PRCDQ00LT1 54 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 OR2C3Q8N628 320 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 OR1P1Q8NH06 330 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 GLYATL2Q8WU03 294 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 RBPMSQ93062 196 aaKnown RBP8.13□□□□□ -1.11
SF3A1-203ENST00000444440 TRIM63Q969Q1 353 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 SLC25A21Q9BQT8 299 aaPredicted RBP8.13□□□□□ -1.11
SF3A1-203ENST00000444440 SPATA25Q9BR10 227 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 HIPK2Q9H2X6 1198 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.13□□□□□ -1.11
SF3A1-203ENST00000444440 C21orf62Q9NYP8 219 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 AGRNO00468 2067 aa8.13□□□□□ -1.11
SF3A1-203ENST00000444440 EPPK1P58107 5090 aaKnown RBP8.13□□□□□ -1.11
SF3A1-203ENST00000444440 A0A0B4J293 547 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 NAP1L6A6NFF2 107 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 CENPXA8MT69 81 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 CTSGP08311 255 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 SRPXP78539 464 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 TRIQKQ629K1 86 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 ZFAND6Q6FIF0 208 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 SELENOHQ8IZQ5 122 aaKnown RBP8.12□□□□□ -1.11
SF3A1-203ENST00000444440 SLC35G3Q8N808 338 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 UBAC2Q8NBM4 344 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 LHFPL5Q8TAF8 219 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 IL22RA2Q969J5 263 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 GALNT14Q96FL9 552 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 BSCL2Q96G97 398 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-203ENST00000444440 ATP6V0BQ99437 205 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 SRRQ9GZT4 340 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 PALMDQ9NP74 551 aa8.12□□□□□ -1.11
SF3A1-203ENST00000444440 ST8SIA3O43173 380 aa8.11□□□□□ -1.11
SF3A1-203ENST00000444440 ELLP55199 621 aaPredicted RBP8.11□□□□□ -1.11
SF3A1-203ENST00000444440 SPCS3P61009 180 aa8.11□□□□□ -1.11
SF3A1-203ENST00000444440 TMEM128Q5BJH2 165 aa8.11□□□□□ -1.11
SF3A1-203ENST00000444440 TMEM268Q5VZI3 342 aa8.11□□□□□ -1.11
SF3A1-203ENST00000444440 SPSB3Q6PJ21 355 aa8.11□□□□□ -1.11
SF3A1-203ENST00000444440 Q6ZRM9 215 aa8.11□□□□□ -1.11
SF3A1-203ENST00000444440 ZNF114Q8NC26 417 aa8.11□□□□□ -1.11
SF3A1-203ENST00000444440 MISP3Q96FF7 219 aa8.11□□□□□ -1.11
SF3A1-203ENST00000444440 MRPL36Q9P0J6 103 aaKnown RBP8.11□□□□□ -1.11
SF3A1-203ENST00000444440 MRPL27Q9P0M9 148 aaKnown RBP8.11□□□□□ -1.11
SF3A1-203ENST00000444440 UBQLN2Q9UHD9 624 aa8.11□□□□□ -1.11
SF3A1-203ENST00000444440 UFC1Q9Y3C8 167 aa8.11□□□□□ -1.11
SF3A1-203ENST00000444440 TMEM56-RWDD3S4R434 201 aa8.11□□□□□ -1.11
SF3A1-203ENST00000444440 INS-IGF2F8WCM5 200 aa8.1□□□□□ -1.11
SF3A1-203ENST00000444440 NDUFA4O00483 81 aa8.1□□□□□ -1.11
SF3A1-203ENST00000444440 MT-CO2P00403 227 aa8.1□□□□□ -1.11
SF3A1-203ENST00000444440 LYL1P12980 280 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms