RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 MS4A2Q01362 244 aa9.42□□□□□ -0.9
SYNCRIP-203ENST00000444272 UNC119Q13432 240 aa9.42□□□□□ -0.9
SYNCRIP-203ENST00000444272 SSX1Q16384 188 aa9.42□□□□□ -0.9
SYNCRIP-203ENST00000444272 LINC01620Q4KN68 170 aa9.42□□□□□ -0.9
SYNCRIP-203ENST00000444272 CMTM1Q8IZ96 169 aa9.42□□□□□ -0.9
SYNCRIP-203ENST00000444272 LGALS12Q96DT0 336 aa9.42□□□□□ -0.9
SYNCRIP-203ENST00000444272 NARS2Q96I59 477 aaKnown RBP9.42□□□□□ -0.9
SYNCRIP-203ENST00000444272 SEPSECSQ9HD40 501 aaKnown RBP9.42□□□□□ -0.9
SYNCRIP-203ENST00000444272 ERVK13-1Q9NX77 482 aa9.42□□□□□ -0.9
SYNCRIP-203ENST00000444272 LY96Q9Y6Y9 160 aa9.42□□□□□ -0.9
SYNCRIP-203ENST00000444272 TRBV5-5A0A0J9YX44 114 aa9.41□□□□□ -0.9
SYNCRIP-203ENST00000444272 TEX50A0A1B0GTY4 177 aa9.41□□□□□ -0.9
SYNCRIP-203ENST00000444272 MARCH11A6NNE9 402 aa9.41□□□□□ -0.9
SYNCRIP-203ENST00000444272 MT-CO2P00403 227 aa9.41□□□□□ -0.9
SYNCRIP-203ENST00000444272 CD37P11049 281 aa9.41□□□□□ -0.9
SYNCRIP-203ENST00000444272 TSPOP30536 169 aa9.41□□□□□ -0.9
SYNCRIP-203ENST00000444272 RPL22L1Q6P5R6 122 aaKnown RBP9.41□□□□□ -0.9
SYNCRIP-203ENST00000444272 TMED4Q7Z7H5 227 aa9.41□□□□□ -0.9
SYNCRIP-203ENST00000444272 H1FOOQ8IZA3 346 aaPredicted RBP9.41□□□□□ -0.9
SYNCRIP-203ENST00000444272 CANT1Q8WVQ1 401 aa9.41□□□□□ -0.9
SYNCRIP-203ENST00000444272 LSM10Q969L4 123 aaKnown RBP9.41□□□□□ -0.9
SYNCRIP-203ENST00000444272 SAC3D1A6NKF1 404 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 IGLV2-14P01704 120 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 UBBP0CG47 229 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 DCKP27707 260 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 POLR2IP36954 125 aaKnown RBP9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 RORCP51449 518 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 AP2S1P53680 142 aaPredicted RBP9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 PAX9P55771 341 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 ACOT6Q3I5F7 207 aaPredicted RBP9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 Q499Y3 187 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 FOXI2Q6ZQN5 318 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 OR13F1Q8NGS4 319 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 OR10J6PQ8NGY7 276 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 MAFIPQ8WZ33 124 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 NRBF2Q96F24 287 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 IGF2BP2-AS1Q96M15 143 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 HSD17B10Q99714 261 aaKnown RBP9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 NRN1Q9NPD7 142 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 TAS2R8Q9NYW2 309 aa9.4□□□□□ -0.9
SYNCRIP-203ENST00000444272 DIRAS3O95661 229 aa9.39□□□□□ -0.91
SYNCRIP-203ENST00000444272 ZNF79Q15937 498 aa9.39□□□□□ -0.91
SYNCRIP-203ENST00000444272 NKAIN3Q8N8D7 197 aa9.39□□□□□ -0.91
SYNCRIP-203ENST00000444272 RBPMSQ93062 196 aaKnown RBP9.39□□□□□ -0.91
SYNCRIP-203ENST00000444272 PINX1Q96BK5 328 aaKnown RBP9.39□□□□□ -0.91
SYNCRIP-203ENST00000444272 ARHGAP5-AS1Q96IT6 56 aa9.39□□□□□ -0.91
SYNCRIP-203ENST00000444272 SCPEP1Q9HB40 452 aa9.39□□□□□ -0.91
SYNCRIP-203ENST00000444272 CD300CQ08708 224 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 FAM78BQ5VT40 261 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 C16orf54Q6UWD8 224 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 OR1L8Q8NGR8 309 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 OR1P1Q8NH06 330 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 LINC00052Q96N35 136 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 ABHD1Q96SE0 405 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 AIFM2Q9BRQ8 373 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 PECRQ9BY49 303 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 LPAR5Q9H1C0 372 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 DCSTAMPQ9H295 470 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 NDUFA4L2Q9NRX3 87 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 TMEM140Q9NV12 185 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 CLEC2DQ9UHP7 191 aa9.38□□□□□ -0.91
SYNCRIP-203ENST00000444272 TMEM50BP56557 158 aa9.37□□□□□ -0.91
SYNCRIP-203ENST00000444272 EIF4EBP1Q13541 118 aaPredicted RBP9.37□□□□□ -0.91
SYNCRIP-203ENST00000444272 CCDC58Q4VC31 144 aa9.37□□□□□ -0.91
SYNCRIP-203ENST00000444272 TPRA1Q86W33 373 aa9.37□□□□□ -0.91
SYNCRIP-203ENST00000444272 VSIG2Q96IQ7 327 aa9.37□□□□□ -0.91
SYNCRIP-203ENST00000444272 LINC00467Q9BRT7 94 aa9.37□□□□□ -0.91
SYNCRIP-203ENST00000444272 NOP10Q9NPE3 64 aaKnown RBP9.37□□□□□ -0.91
SYNCRIP-203ENST00000444272 TIMM8BQ9Y5J9 83 aaPredicted RBP9.37□□□□□ -0.91
SYNCRIP-203ENST00000444272 TMEM14DPA8MWL7 114 aa9.36□□□□□ -0.91
SYNCRIP-203ENST00000444272 F6UB75 175 aa9.36□□□□□ -0.91
SYNCRIP-203ENST00000444272 FCGR3AP08637 254 aa9.36□□□□□ -0.91
SYNCRIP-203ENST00000444272 EVI2AP22794 236 aa9.36□□□□□ -0.91
SYNCRIP-203ENST00000444272 NPBWR1P48145 328 aa9.36□□□□□ -0.91
SYNCRIP-203ENST00000444272 RPS11P62280 158 aaKnown RBP eCLIP9.36□□□□□ -0.915e-6■□□□□ 9.6
SYNCRIP-203ENST00000444272 MRPS15P82914 257 aaKnown RBP9.36□□□□□ -0.91
SYNCRIP-203ENST00000444272 KDM4DQ6B0I6 523 aa9.36□□□□□ -0.91
SYNCRIP-203ENST00000444272 SMIM19Q96E16 107 aa9.36□□□□□ -0.91
SYNCRIP-203ENST00000444272 SLC29A1Q99808 456 aa9.36□□□□□ -0.91
SYNCRIP-203ENST00000444272 FOXI3A8MTJ6 420 aaPredicted RBP9.35□□□□□ -0.91
SYNCRIP-203ENST00000444272 IGLV2-11P01706 119 aa9.35□□□□□ -0.91
SYNCRIP-203ENST00000444272 CDK1P06493 297 aa9.35□□□□□ -0.91
SYNCRIP-203ENST00000444272 TAS2R31P59538 309 aa9.35□□□□□ -0.91
SYNCRIP-203ENST00000444272 SPAG16Q8N0X2 631 aa9.35□□□□□ -0.91
SYNCRIP-203ENST00000444272 LRTM2Q8N967 370 aa9.35□□□□□ -0.91
SYNCRIP-203ENST00000444272 DMBX1Q8NFW5 382 aa9.35□□□□□ -0.91
SYNCRIP-203ENST00000444272 DPH3P1Q9H4G8 78 aa9.35□□□□□ -0.91
SYNCRIP-203ENST00000444272 ARL2BPQ9Y2Y0 163 aa9.35□□□□□ -0.91
SYNCRIP-203ENST00000444272 U3KQE9 123 aa9.35□□□□□ -0.91
SYNCRIP-203ENST00000444272 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.34□□□□□ -0.91
SYNCRIP-203ENST00000444272 IGKV1D-13A0A0B4J2D9 117 aa9.34□□□□□ -0.91
SYNCRIP-203ENST00000444272 K7EP13 123 aa9.34□□□□□ -0.91
SYNCRIP-203ENST00000444272 MFNGO00587 321 aa9.34□□□□□ -0.91
SYNCRIP-203ENST00000444272 SLC22A5O76082 557 aa9.34□□□□□ -0.91
SYNCRIP-203ENST00000444272 TMEM50AO95807 157 aa9.34□□□□□ -0.91
SYNCRIP-203ENST00000444272 INSP01308 110 aa9.34□□□□□ -0.91
SYNCRIP-203ENST00000444272 FGF2P09038 288 aa9.34□□□□□ -0.91
SYNCRIP-203ENST00000444272 IGKV1-13P0DP09 117 aa9.34□□□□□ -0.91
SYNCRIP-203ENST00000444272 NQO2P16083 231 aa9.34□□□□□ -0.91
SYNCRIP-203ENST00000444272 QRFPP83859 136 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms