RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 OR11G2Q8NGC1 345 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 MAL2Q969L2 176 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 C16orf74Q96GX8 76 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 PSMG3Q9BT73 122 aaPredicted RBP3.11□□□□□ -1.91
VPS50-206ENST00000443443 SHANK2-AS3Q9BTD1 123 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 NAV1Q8NEY1 1877 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 WDR97A6NE52 1622 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 RB1CC1Q8TDY2 1594 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 C1orf196B1AJZ1 125 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 CST7O76096 145 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 IFNA17P01571 189 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 MT-ND4LP03901 98 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 LGALS3P17931 250 aaKnown RBP3.1□□□□□ -1.91
VPS50-206ENST00000443443 GUCA1AP43080 201 aaPredicted RBP3.1□□□□□ -1.91
VPS50-206ENST00000443443 CMC4P56277 68 aaPredicted RBP3.1□□□□□ -1.91
VPS50-206ENST00000443443 PKIAP61925 76 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 RPL30P62888 115 aaKnown RBP3.1□□□□□ -1.91
VPS50-206ENST00000443443 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 LINC01551Q86U37 167 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 C10orf126Q8N4M7 172 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 ACBD7Q8N6N7 88 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 OR4S1Q8NGB4 309 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 OR5C1Q8NGR4 320 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 OR2T10Q8NGZ9 312 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 TSSK6Q9BXA6 273 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 CST9LQ9H4G1 147 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 RPP21Q9H633 154 aaKnown RBP3.1□□□□□ -1.91
VPS50-206ENST00000443443 OTORQ9NRC9 128 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 ZFP30Q9Y2G7 519 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 MYH2Q9UKX2 1941 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 HECW1Q76N89 1606 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 NALCNQ8IZF0 1738 aa3.1□□□□□ -1.91
VPS50-206ENST00000443443 MYO5BQ9ULV0 1848 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 CACNA1SQ13698 1873 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 YLPM1P49750 1951 aaKnown RBP3.09□□□□□ -1.91
VPS50-206ENST00000443443 DOCK3Q8IZD9 2030 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 IGKV1-12A0A0C4DH73 117 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 M0R143 59 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 IGKV1D-12P01611 117 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 IGLV3-25P01717 112 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 PRM2P04554 102 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 IGHV4-34P06331 123 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 FABP2P12104 132 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 SRP14P37108 136 aaKnown RBP3.09□□□□□ -1.91
VPS50-206ENST00000443443 CSN1S1P47710 185 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 INSL3P51460 131 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 CRISP3P54108 245 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 RBM11P57052 281 aaKnown RBP3.09□□□□□ -1.91
VPS50-206ENST00000443443 C9orf129Q5T035 196 aaKnown RBP3.09□□□□□ -1.91
VPS50-206ENST00000443443 AADACL3Q5VUY0 350 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 TMEM244Q5VVB8 128 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 Q5XG85 94 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 AMMECR1LQ6DCA0 310 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 TEX261Q6UWH6 196 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 AMTNQ6UX39 209 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 SSX8Q7RTT4 187 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 PCP2Q8IVA1 136 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 RNF175Q8N4F7 328 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 DAND5Q8N907 189 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 FNDC9Q8TBE3 224 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 TMEM158Q8WZ71 300 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 TBL1YQ9BQ87 522 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 TP73-AS1Q9UF72 201 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 BAIAP2Q9UQB8 552 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 FUT9Q9Y231 359 aa3.09□□□□□ -1.91
VPS50-206ENST00000443443 SOX21Q9Y651 276 aaPredicted RBP3.09□□□□□ -1.91
VPS50-206ENST00000443443 NAIPQ13075 1403 aa3.09□□□□□ -1.92
VPS50-206ENST00000443443 ERBINQ96RT1 1412 aa3.09□□□□□ -1.92
VPS50-206ENST00000443443 DYSFO75923 2080 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 REREQ9P2R6 1566 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 IGHV3-21A0A0B4J1V1 117 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 IGHV3-43A0A0B4J1X8 118 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 IGKV1D-43A0A0B4J1Z2 117 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 LOC107984640A0A0U1RRK4 108 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 A0A1B0GVX0 72 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 A0A1W2PP18 115 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 GGT3PA6NGU5 568 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 ZFP92A6NM28 416 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 LEUTXA8MZ59 168 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 GGTLC3B5MD39 225 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 OR2T1O43869 369 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 ZNF324O75467 553 aaPredicted RBP3.08□□□□□ -1.92
VPS50-206ENST00000443443 NCR2O95944 276 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 IGKV1-5P01602 117 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 HLA-DQA1P01909 254 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 APODP05090 189 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 P0C879 139 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 IGLC6P0CF74 106 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 LINC00694P0DN24 101 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 PTHLHP12272 177 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 MUC1P15941 1255 aaPredicted RBP3.08□□□□□ -1.92
VPS50-206ENST00000443443 ZNF80P51504 273 aaPredicted RBP3.08□□□□□ -1.92
VPS50-206ENST00000443443 TMBIM6P55061 237 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 YPEL3P61236 119 aaPredicted RBP3.08□□□□□ -1.92
VPS50-206ENST00000443443 EIF5AP63241 154 aaKnown RBP3.08□□□□□ -1.92
VPS50-206ENST00000443443 GLIPR1L1Q6UWM5 242 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 LINC00305Q7Z4B0 112 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 TRAPPC6BQ86SZ2 158 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 MSRB3Q8IXL7 192 aa3.08□□□□□ -1.92
VPS50-206ENST00000443443 AMN1Q8IY45 258 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms