RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 ENY2Q9NPA8 101 aa9.54□□□□□ -0.88
CDCA4P3-201ENST00000442572 C21orf62Q9NYP8 219 aa9.54□□□□□ -0.88
CDCA4P3-201ENST00000442572 SHPKQ9UHJ6 478 aa9.54□□□□□ -0.88
CDCA4P3-201ENST00000442572 A0A0G2JRQ6 117 aa9.53□□□□□ -0.88
CDCA4P3-201ENST00000442572 C2orf70A6NJV1 201 aa9.53□□□□□ -0.88
CDCA4P3-201ENST00000442572 IGHV3-23P01764 117 aa9.53□□□□□ -0.88
CDCA4P3-201ENST00000442572 NHLRC4P0CG21 123 aaPredicted RBP9.53□□□□□ -0.88
CDCA4P3-201ENST00000442572 AKR1C4P17516 323 aa9.53□□□□□ -0.88
CDCA4P3-201ENST00000442572 MFAP4P55083 255 aa9.53□□□□□ -0.88
CDCA4P3-201ENST00000442572 SUPT4H1P63272 117 aaKnown RBP9.53□□□□□ -0.88
CDCA4P3-201ENST00000442572 CD69Q07108 199 aa9.53□□□□□ -0.88
CDCA4P3-201ENST00000442572 CNPY1Q3B7I2 92 aa9.53□□□□□ -0.88
CDCA4P3-201ENST00000442572 LGI3Q8N145 548 aa9.53□□□□□ -0.88
CDCA4P3-201ENST00000442572 ZNF436Q9C0F3 470 aaPredicted RBP9.53□□□□□ -0.88
CDCA4P3-201ENST00000442572 UFC1Q9Y3C8 167 aa9.53□□□□□ -0.88
CDCA4P3-201ENST00000442572 S4R3C0 116 aa9.53□□□□□ -0.88
CDCA4P3-201ENST00000442572 CENPXA8MT69 81 aa9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 I3L2K1 104 aa9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 NDUFA4O00483 81 aa9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 SULT1A3P0DMM9 295 aa9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 SULT1A4P0DMN0 295 aa9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 FOLR2P14207 255 aa9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 HOXA1P49639 335 aaPredicted RBP9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 CCR6P51684 374 aa9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 BSXQ3C1V8 233 aa9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 Q6ZRM9 215 aa9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 LRTM2Q8N967 370 aa9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 DYNLRB2Q8TF09 96 aa9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 GPR146Q96CH1 333 aa9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 MRPL27Q9P0M9 148 aaKnown RBP9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 CACNG5Q9UF02 275 aa9.52□□□□□ -0.89
CDCA4P3-201ENST00000442572 ZNF320A2RRD8 509 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 TMEM213A2RRL7 107 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 OR2T8A6NH00 312 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 A8MZ25 164 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 F8W735 103 aaPredicted RBP9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 NUPL2O15504 423 aaKnown RBP9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 MT-CO2P00403 227 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 C8orf88P0DMB2 117 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 CBLN1P23435 193 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 HTR2BP41595 481 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 NPBWR1P48145 328 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 RELQ04864 619 aaPredicted RBP9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 BAK1Q16611 211 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 DEFB114Q30KQ6 69 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 NMSQ5H8A3 153 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 GTSCR1Q86UQ5 136 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 NOXA1Q86UR1 476 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 CENPSQ8N2Z9 138 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 TMEM190Q8WZ59 177 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 MISP3Q96FF7 219 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 SDHCQ99643 169 aaPredicted RBP9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 ZC4H2Q9NQZ6 224 aa9.51□□□□□ -0.89
CDCA4P3-201ENST00000442572 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 A0A1B0GU03 582 aa9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 K7EMT4 169 aa9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 NDUFB6O95139 128 aa9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 CTSGP08311 255 aa9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 SLC25A6P12236 298 aa9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 IL7P13232 177 aa9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 ATP5IP56385 69 aaPredicted RBP9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 SMCO1Q147U7 214 aa9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 Q56UQ5 140 aa9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 ADAMTSL5Q6ZMM2 481 aa9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 TMED4Q7Z7H5 227 aa9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 DUSP18Q8NEJ0 188 aa9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 HIPK2Q9H2X6 1198 aa9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 DAZ1Q9NQZ3 744 aaKnown RBP9.5□□□□□ -0.89
CDCA4P3-201ENST00000442572 C15orf62A8K5M9 175 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 GNG7O60262 68 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 SCGB2A1O75556 95 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 VAMP1P23763 118 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 ADMP35318 185 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 CD300EQ496F6 205 aaPredicted RBP9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 C2orf83Q53S99 150 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 SPINK9Q5DT21 86 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 UNQ9165/PRO28630Q6UXU0 137 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 HAPLN4Q86UW8 402 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 Q8N1Y9 231 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 UBAC2Q8NBM4 344 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 RNASEH2CQ8TDP1 164 aaKnown RBP9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 S100ZQ8WXG8 99 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 CHRDL1Q9BU40 450 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 CCDC32Q9BV29 185 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 HEYLQ9NQ87 328 aaPredicted RBP9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 HSPB7Q9UBY9 170 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 TMED3Q9Y3Q3 217 aa9.49□□□□□ -0.89
CDCA4P3-201ENST00000442572 IGHV3-21A0A0B4J1V1 117 aa9.48□□□□□ -0.89
CDCA4P3-201ENST00000442572 RPS10-NUDT3A0A1W2PQS6 291 aa9.48□□□□□ -0.89
CDCA4P3-201ENST00000442572 A6NHS1 94 aa9.48□□□□□ -0.89
CDCA4P3-201ENST00000442572 CEBPZOSA8MTT3 80 aa9.48□□□□□ -0.89
CDCA4P3-201ENST00000442572 FAM90A26D6RGX4 464 aa9.48□□□□□ -0.89
CDCA4P3-201ENST00000442572 SFT2D2O95562 160 aa9.48□□□□□ -0.89
CDCA4P3-201ENST00000442572 TNFRSF9Q07011 255 aa9.48□□□□□ -0.89
CDCA4P3-201ENST00000442572 LYZL2Q7Z4W2 148 aa9.48□□□□□ -0.89
CDCA4P3-201ENST00000442572 UXS1Q8NBZ7 420 aa9.48□□□□□ -0.89
CDCA4P3-201ENST00000442572 PINX1Q96BK5 328 aaKnown RBP9.48□□□□□ -0.89
CDCA4P3-201ENST00000442572 U3KQ87 197 aa9.48□□□□□ -0.89
CDCA4P3-201ENST00000442572 TRAV30A0A087WSZ9 112 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms