RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 IGKV1-33P01594 117 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 MBPP02686 304 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-206ENST00000441089 RRASP10301 218 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 SLC25A6P12236 298 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 MC5RP33032 325 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 CEACAM3P40198 252 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 AKR1C2P52895 323 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 NKX2-5P52952 324 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-206ENST00000441089 F2RL1P55085 397 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 OR2B8PP59922 312 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 RPS16P62249 146 aaKnown RBP3.71□□□□□ -1.82
PTPN4-206ENST00000441089 SSBP2P81877 361 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-206ENST00000441089 PJVKQ0ZLH3 352 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 RAB32Q13637 225 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 SMCO1Q147U7 214 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 PSG5Q15238 335 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 RTL8BQ17RB0 113 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 CXorf66Q5JRM2 361 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-206ENST00000441089 OR4A47Q6IF82 309 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 DMBX1Q8NFW5 382 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 OR2T35Q8NGX2 323 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 GRPEL2Q8TAA5 225 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 OSR1Q8TAX0 266 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-206ENST00000441089 WIPF2Q8TF74 440 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-206ENST00000441089 PPP1R1CQ8WVI7 109 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 FLYWCH2Q96CP2 140 aaKnown RBP3.71□□□□□ -1.82
PTPN4-206ENST00000441089 AIFM2Q9BRQ8 373 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 PDCD10Q9BUL8 212 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 RNF126Q9BV68 326 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 QTRT1Q9BXR0 403 aaKnown RBP3.71□□□□□ -1.82
PTPN4-206ENST00000441089 NMES1Q9C002 83 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 PLSCR3Q9NRY6 295 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 OR5AC2Q9NZP5 309 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 GSKIPQ9P0R6 139 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 RCL1Q9Y2P8 373 aaKnown RBP3.71□□□□□ -1.82
PTPN4-206ENST00000441089 TSSC4Q9Y5U2 329 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-206ENST00000441089 A0A1B0GU03 582 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 MSGN1A6NI15 193 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 C15orf61A6NNL5 157 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 E7EUB6 86 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 H3BUX3 64 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 K7EPK0 472 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 ST8SIA3O43173 380 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 KBTBD11O94819 623 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 NDUFA3O95167 84 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 MPC2O95563 127 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 LY6G6CO95867 125 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 SCGB1D2O95969 90 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 MOSP00540 346 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 HRASP01112 189 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 C1QBP02746 253 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 SLC25A4P12235 298 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 LGALS7P47929 136 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 DYNLT3P51808 116 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 PAX9P55771 341 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 UBE2KP61086 200 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 ERVK-16P61578 105 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 POLR2GP62487 172 aaKnown RBP eCLIP3.7□□□□□ -1.82
PTPN4-206ENST00000441089 HNF4GQ14541 408 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 AANATQ16613 207 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 LRRC37A5PQ49AS3 106 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 AARDQ4LEZ3 155 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 SPINK9Q5DT21 86 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 C10orf55Q5SWW7 151 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 LAMTOR1Q6IAA8 161 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 CCDC144NLQ6NUI1 221 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 H2BFWTQ7Z2G1 175 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 NOXA1Q86UR1 476 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 FOXRED2Q8IWF2 684 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 Q8N2B8 174 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 FAM71E2Q8N5Q1 922 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 Q8N9W7 124 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 NPBQ8NG41 125 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 OR1S1Q8NH92 325 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 RNASE11Q8TAA1 199 aaKnown RBP3.7□□□□□ -1.82
PTPN4-206ENST00000441089 TMEM167AQ8TBQ9 72 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 ASB13Q8WXK3 278 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 RRNAD1Q96FB5 475 aaKnown RBP3.7□□□□□ -1.82
PTPN4-206ENST00000441089 BSCL2Q96G97 398 aaPredicted RBP3.7□□□□□ -1.82
PTPN4-206ENST00000441089 PRR25Q96S07 402 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 RNF5Q99942 180 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 KRTAP1-5Q9BYS1 174 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 MAGT1Q9H0U3 335 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 FBXL15Q9H469 300 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 ZNF430Q9H8G1 570 aaPredicted RBP3.7□□□□□ -1.82
PTPN4-206ENST00000441089 COA4Q9NYJ1 87 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 BET1LQ9NYM9 111 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 MBD2Q9UBB5 411 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 HSPB7Q9UBY9 170 aa3.7□□□□□ -1.82
PTPN4-206ENST00000441089 FOXA2Q9Y261 457 aaPredicted RBP3.7□□□□□ -1.82
PTPN4-206ENST00000441089 LSM5Q9Y4Y9 91 aaKnown RBP3.7□□□□□ -1.82
PTPN4-206ENST00000441089 TRGV11A0A075B6L2 103 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 TEX50A0A1B0GTY4 177 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 TCRBV4S1A1TA0A5B7 111 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 RNF222A6NCQ9 220 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 A6NDX4 124 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 SH2D7A6NKC9 451 aaPredicted RBP3.69□□□□□ -1.82
PTPN4-206ENST00000441089 FCN1O00602 326 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 RRHO14718 337 aa3.69□□□□□ -1.82
PTPN4-206ENST00000441089 NBR2O15453 112 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms