RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 RCVRNP35243 200 aa8.57□□□□□ -1.04
UBE2D4-204ENST00000440899 PAFAH1B2P68402 229 aa8.57□□□□□ -1.04
UBE2D4-204ENST00000440899 SNX29P2Q8IUI4 249 aa8.57□□□□□ -1.04
UBE2D4-204ENST00000440899 GATAD1Q8WUU5 269 aa8.57□□□□□ -1.04
UBE2D4-204ENST00000440899 MRGPRFQ96AM1 343 aa8.57□□□□□ -1.04
UBE2D4-204ENST00000440899 GINS3Q9BRX5 216 aa8.57□□□□□ -1.04
UBE2D4-204ENST00000440899 IGKV3-7A0A075B6H7 116 aa8.56□□□□□ -1.04
UBE2D4-204ENST00000440899 IGHV3-48P01763 117 aa8.56□□□□□ -1.04
UBE2D4-204ENST00000440899 NPBWR1P48145 328 aa8.56□□□□□ -1.04
UBE2D4-204ENST00000440899 TFPI2P48307 235 aa8.56□□□□□ -1.04
UBE2D4-204ENST00000440899 FAM90A2PQ658T7 463 aa8.56□□□□□ -1.04
UBE2D4-204ENST00000440899 PINX1Q96BK5 328 aaKnown RBP8.56□□□□□ -1.04
UBE2D4-204ENST00000440899 RARRES2Q99969 163 aa8.56□□□□□ -1.04
UBE2D4-204ENST00000440899 IGHV3OR16-13A0A075B7E8 117 aa8.55□□□□□ -1.04
UBE2D4-204ENST00000440899 IGHV3-74A0A0B4J1X5 117 aa8.55□□□□□ -1.04
UBE2D4-204ENST00000440899 TNFAIP8O95379 198 aa8.55□□□□□ -1.04
UBE2D4-204ENST00000440899 ELK1P19419 428 aa8.55□□□□□ -1.04
UBE2D4-204ENST00000440899 SNCAP37840 140 aa8.55□□□□□ -1.04
UBE2D4-204ENST00000440899 RND3P61587 244 aa8.55□□□□□ -1.04
UBE2D4-204ENST00000440899 ZNF124Q15973 351 aa8.55□□□□□ -1.04
UBE2D4-204ENST00000440899 TOMM20LQ6UXN7 152 aa8.55□□□□□ -1.04
UBE2D4-204ENST00000440899 TCF24Q7RTU0 167 aa8.55□□□□□ -1.04
UBE2D4-204ENST00000440899 GBGT1Q8N5D6 347 aa8.55□□□□□ -1.04
UBE2D4-204ENST00000440899 DUSP18Q8NEJ0 188 aa8.55□□□□□ -1.04
UBE2D4-204ENST00000440899 PHLDA1Q8WV24 401 aaPredicted RBP8.55□□□□□ -1.04
UBE2D4-204ENST00000440899 ZNF486Q96H40 463 aaPredicted RBP8.55□□□□□ -1.04
UBE2D4-204ENST00000440899 INS-IGF2F8WCM5 200 aa8.54□□□□□ -1.04
UBE2D4-204ENST00000440899 M0QYG6 137 aa8.54□□□□□ -1.04
UBE2D4-204ENST00000440899 DNASE2O00115 360 aaPredicted RBP8.54□□□□□ -1.04
UBE2D4-204ENST00000440899 DFFBO76075 338 aa8.54□□□□□ -1.04
UBE2D4-204ENST00000440899 ATG12O94817 140 aa8.54□□□□□ -1.04
UBE2D4-204ENST00000440899 PGAM2P15259 253 aa8.54□□□□□ -1.04
UBE2D4-204ENST00000440899 SUB1P53999 127 aaKnown RBP eCLIP8.54□□□□□ -1.04
UBE2D4-204ENST00000440899 NCS1P62166 190 aa8.54□□□□□ -1.04
UBE2D4-204ENST00000440899 ZNF600Q6ZNG1 722 aa8.54□□□□□ -1.04
UBE2D4-204ENST00000440899 SLC35G3Q8N808 338 aa8.54□□□□□ -1.04
UBE2D4-204ENST00000440899 VSIRQ9H7M9 311 aa8.54□□□□□ -1.04
UBE2D4-204ENST00000440899 TRAV2A0A0B4J234 112 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 A0A0B4J293 547 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 ST8SIA3O43173 380 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 HPGDSO60760 199 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 TMEM50AO95807 157 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 IFNA17P01571 189 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 IGKV1-5P01602 117 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 P0C879 139 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 PIGPP57054 158 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 VBP1P61758 197 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 IZUMO4Q1ZYL8 232 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 SPINK9Q5DT21 86 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 RNASE10Q5GAN6 216 aaKnown RBP8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 MZT2AQ6P582 158 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 OR11H2Q8NH07 326 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 ST8SIA2Q92186 375 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 FUNDC2Q9BWH2 189 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 MFFQ9GZY8 342 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 MS4A6AQ9H2W1 248 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 C11orf68Q9H3H3 251 aaKnown RBP8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 TMEM231Q9H6L2 316 aa8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 PUS1Q9Y606 427 aaKnown RBP eCLIP8.53□□□□□ -1.04
UBE2D4-204ENST00000440899 DNAH10Q8IVF4 4471 aa8.52□□□□□ -1.04
UBE2D4-204ENST00000440899 CORTO00230 105 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 APOHP02749 345 aaPredicted RBP8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 CD3DP04234 171 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 IFNA4P05014 189 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 PI3P19957 117 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 TBPP20226 339 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 NPPCP23582 126 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 RORCP51449 518 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 AKR1C2P52895 323 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 DEFB131AP59861 70 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 RPL11P62913 178 aaKnown RBP8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 LGALS9CQ6DKI2 356 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 PVRIGQ6DKI7 326 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 LHFPL1Q86WI0 220 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 LILRB2Q8N423 598 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 ARRDC1Q8N5I2 433 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 C11orf45Q8TAV5 145 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 ZFAND1Q8TCF1 268 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 TP53RKQ96S44 253 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 PDCD10Q9BUL8 212 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 ZFAND3Q9H8U3 227 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 KLK11Q9UBX7 282 aa8.52□□□□□ -1.05
UBE2D4-204ENST00000440899 IGHV3-66A0A0C4DH42 116 aa8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 C3orf85A0A1B0GTC6 90 aa8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 A0A1B0GU03 582 aa8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 A0A1W2PS18 150 aa8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 FAM25AB3EWG3 89 aa8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 FAM25CB3EWG5 89 aa8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 FAM25GB3EWG6 89 aa8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 CA1P00915 261 aaPredicted RBP8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 RNASE2P10153 161 aaKnown RBP8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 NANOS2P60321 138 aaKnown RBP8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 TMEM187Q14656 261 aa8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 RBMS2Q15434 407 aaKnown RBP8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 OR52I2Q8NH67 350 aa8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 RRNAD1Q96FB5 475 aaKnown RBP8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 ENY2Q9NPA8 101 aa8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 COPZ2Q9P299 210 aa8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 MTFP1Q9UDX5 166 aa8.51□□□□□ -1.05
UBE2D4-204ENST00000440899 VPS13DQ5THJ4 4388 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms