RNA–Protein interactions for RNA: ENST00000440125.5

STRC-203, Transcript of stereocilin, humanhuman

TSL 1 (best)

Gene STRC, Length 4,291 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-203ENST00000440125 RBFOX2O43251 390 aaKnown RBP eCLIP9.36□□□□□ -0.91
STRC-203ENST00000440125 IGKV1-39P01597 117 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 IGKV1D-39P04432 117 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 C9orf106Q8NAJ2 232 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 SEPSECSQ9HD40 501 aaKnown RBP9.36□□□□□ -0.91
STRC-203ENST00000440125 CEP295Q9C0D2 2601 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 TRBV6-6A0A0A6YYG2 114 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 KBTBD11-OT1A0A1B0GTJ5 212 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 STAG3L2P0CL84 134 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 STAG3L3P0CL85 134 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 UQCRFS1P47985 274 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 COLCA1Q6ZS62 124 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 LINC00305Q7Z4B0 112 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 TMEM144Q7Z5S9 345 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 OR4C13Q8NGP0 309 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 SAA2-SAA4A0A096LPE2 208 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 SAA2P0DJI9 122 aaPredicted RBP9.36□□□□□ -0.91
STRC-203ENST00000440125 MUC15Q8N387 334 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 OR9G1Q8NH87 305 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 SPRR3Q9UBC9 169 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 KIAA1549LQ6ZVL6 1849 aa9.36□□□□□ -0.91
STRC-203ENST00000440125 S100A4P26447 101 aaKnown RBP9.35□□□□□ -0.91
STRC-203ENST00000440125 GLRXP35754 106 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 RPL24P83731 157 aaKnown RBP9.35□□□□□ -0.91
STRC-203ENST00000440125 SRSF12Q8WXF0 261 aaKnown RBP9.35□□□□□ -0.91
STRC-203ENST00000440125 SSBP4Q9BWG4 385 aaPredicted RBP9.35□□□□□ -0.91
STRC-203ENST00000440125 YPEL1O60688 119 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 IGKV1D-33P01593 117 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 IGKV1-33P01594 117 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 CA7P43166 264 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 HOXA4Q00056 320 aaPredicted RBP9.35□□□□□ -0.91
STRC-203ENST00000440125 YPEL2Q96QA6 119 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 AGMATQ9BSE5 352 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 COL25A1Q9BXS0 654 aaPredicted RBP9.35□□□□□ -0.91
STRC-203ENST00000440125 C2orf16Q68DN1 1984 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 C15orf61A6NNL5 157 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 MC5RP33032 325 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 FOXL1Q12952 345 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 TBR1Q16650 682 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 ACTL10Q5JWF8 245 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 SLC25A34Q6PIV7 304 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 GOLT1AQ6ZVE7 132 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 SSC4DQ8WTU2 575 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 MRPL32Q9BYC8 188 aaKnown RBP9.35□□□□□ -0.91
STRC-203ENST00000440125 ELOVL5Q9NYP7 299 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 UNC80Q8N2C7 3258 aa9.35□□□□□ -0.91
STRC-203ENST00000440125 C15orf62A8K5M9 175 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 PEX7O00628 323 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 NBEAP1P0C6P0 100 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 PRR31Q5SQ13 230 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 ERASQ7Z444 233 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 COQ2Q96H96 371 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 THYN1Q9P016 225 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 YLPM1P49750 1951 aaKnown RBP9.34□□□□□ -0.91
STRC-203ENST00000440125 SPTBN4Q9H254 2564 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 PRR14LQ5THK1 2151 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 NUP210Q8TEM1 1887 aaPredicted RBP9.34□□□□□ -0.91
STRC-203ENST00000440125 FOXH1O75593 365 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 PYYP10082 97 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 BTF3P20290 206 aaKnown RBP9.34□□□□□ -0.91
STRC-203ENST00000440125 NUTF2P61970 127 aaKnown RBP9.34□□□□□ -0.91
STRC-203ENST00000440125 C1orf185Q5T7R7 199 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 MGST2Q99735 147 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 PARD6GQ9BYG4 376 aaPredicted RBP9.34□□□□□ -0.91
STRC-203ENST00000440125 IGF2RP11717 2491 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 EREGO14944 169 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 CD3EP07766 207 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 FAM27E3Q08E93 113 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 C1orf194Q5T5A4 169 aa9.34□□□□□ -0.91
STRC-203ENST00000440125 TRAV9-1A0A075B6T8 112 aa9.34□□□□□ -0.92
STRC-203ENST00000440125 MYOD1P15172 320 aa9.34□□□□□ -0.92
STRC-203ENST00000440125 NMUP48645 174 aa9.34□□□□□ -0.92
STRC-203ENST00000440125 ACSF3Q4G176 576 aaPredicted RBP9.34□□□□□ -0.92
STRC-203ENST00000440125 HAPLN4Q86UW8 402 aa9.34□□□□□ -0.92
STRC-203ENST00000440125 DTX1Q86Y01 620 aa9.34□□□□□ -0.92
STRC-203ENST00000440125 KCNS1Q96KK3 526 aa9.34□□□□□ -0.92
STRC-203ENST00000440125 TMEM70Q9BUB7 260 aa9.34□□□□□ -0.92
STRC-203ENST00000440125 SCNM1Q9BWG6 230 aa9.34□□□□□ -0.92
STRC-203ENST00000440125 MRPL20Q9BYC9 149 aaKnown RBP9.34□□□□□ -0.92
STRC-203ENST00000440125 UFC1Q9Y3C8 167 aa9.34□□□□□ -0.92
STRC-203ENST00000440125 HILPDAQ9Y5L2 63 aa9.34□□□□□ -0.92
STRC-203ENST00000440125 A8MWP6 167 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 CCL3L1P16619 93 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 ZCCHC24Q8N2G6 241 aaKnown RBP9.33□□□□□ -0.92
STRC-203ENST00000440125 SNRNP40Q96DI7 357 aaKnown RBP9.33□□□□□ -0.92
STRC-203ENST00000440125 LAMTOR2Q9Y2Q5 125 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 PLCE1Q9P212 2302 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 GTF3C1Q12789 2109 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 ZNF503-AS2A6NEH8 195 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 SAA1P0DJI8 122 aaPredicted RBP9.33□□□□□ -0.92
STRC-203ENST00000440125 GNG5P63218 68 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 HBBP68871 147 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 LEMD1Q68G75 181 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 BEND2Q8NDZ0 799 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 C2orf88Q9BSF0 95 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 CLEC5AQ9NY25 188 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 TRAV5A0A0B4J249 113 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 CEACAM3P40198 252 aa9.33□□□□□ -0.92
STRC-203ENST00000440125 OR10W1Q8NGF6 305 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms