RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 TEX22C9J3V5 150 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 CORTO00230 105 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 NBR2O15453 112 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 NDUFA3O95167 84 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 MOSP00540 346 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 CRYGCP07315 174 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 LCN2P80188 198 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 SSBP2P81877 361 aaPredicted RBP9.41□□□□□ -0.9
SMAD3-202ENST00000439724 ETFRF1Q6IPR1 90 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 CYP2G1PQ6ZSU1 146 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 OR1P1Q8NH06 330 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 OR4F5Q8NH21 305 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 SRSF12Q8WXF0 261 aaKnown RBP9.41□□□□□ -0.9
SMAD3-202ENST00000439724 OR4F4Q96R69 305 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 SPOCK3Q9BQ16 436 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 SDF2L1Q9HCN8 221 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 SEPSECSQ9HD40 501 aaKnown RBP9.41□□□□□ -0.9
SMAD3-202ENST00000439724 HILPDAQ9Y5L2 63 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 HRNRQ86YZ3 2850 aaPredicted RBP9.41□□□□□ -0.9
SMAD3-202ENST00000439724 C11orf94C9JXX5 98 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 KALRNO60229 2985 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 FOXH1O75593 365 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 MT-CO2P00403 227 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 REG1AP05451 166 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 OR5G3P0C626 314 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 FOLR2P14207 255 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 AREGP15514 252 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 GCHFRP30047 84 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 MMDQ15546 238 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 SPATA31B1PQ5VZV4 182 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 OR2T6Q8NHC8 308 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 HIST1H2BAQ96A08 127 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 ACY3Q96HD9 319 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 EAF1Q96JC9 268 aaPredicted RBP9.41□□□□□ -0.9
SMAD3-202ENST00000439724 SMIM7Q9BQ49 75 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 NAT8Q9UHE5 227 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 FUT9Q9Y231 359 aa9.41□□□□□ -0.9
SMAD3-202ENST00000439724 POLR3KQ9Y2Y1 108 aaPredicted RBP9.41□□□□□ -0.9
SMAD3-202ENST00000439724 TBL2Q9Y4P3 447 aaKnown RBP9.41□□□□□ -0.9
SMAD3-202ENST00000439724 F6UZH7 168 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 PDE6DO43924 150 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 TSPAN9O75954 239 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 MT-ND4LP03901 98 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 RNF224P0DH78 156 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 MFAP2P55001 183 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 GNB1P62873 340 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 PLGLAQ15195 96 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 FAM78BQ5VT40 261 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 OR2T10Q8NGZ9 312 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 YPEL4Q96NS1 127 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 TBX15Q96SF7 602 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 RNF2Q99496 336 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 CCL19Q99731 98 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 MRPL32Q9BYC8 188 aaKnown RBP9.4□□□□□ -0.91
SMAD3-202ENST00000439724 PARLQ9H300 379 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 F11RQ9Y624 299 aaKnown RBP9.4□□□□□ -0.91
SMAD3-202ENST00000439724 ARL2-SNX15V9GYD0 113 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 PLXNB1O43157 2135 aa9.4□□□□□ -0.91
SMAD3-202ENST00000439724 NAV3Q8IVL0 2385 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 IGKV1D-37A0A075B6S9 117 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 TCRBV4S1A1TA0A5B7 111 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 PSMB11A5LHX3 300 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 CXorf65A6NEN9 183 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 FCN1O00602 326 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 CLN5O75503 358 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 TOX4O94842 621 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 OR2C1O95371 312 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 RND2P52198 227 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 LGALS4P56470 323 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 SELENOTP62341 195 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 FLI1Q01543 452 aaPredicted RBP9.39□□□□□ -0.91
SMAD3-202ENST00000439724 EBI3Q14213 229 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 RNF212Q495C1 297 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 MIR17HGQ75NE6 70 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 Q8N6K4 173 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 NPIPB3Q92617 1050 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 ISOC2Q96AB3 205 aa9.39□□□□□ -0.91
SMAD3-202ENST00000439724 RPUSD4Q96CM3 377 aaKnown RBP9.39□□□□□ -0.91
SMAD3-202ENST00000439724 TECRQ9NZ01 308 aaKnown RBP9.39□□□□□ -0.91
SMAD3-202ENST00000439724 MRPL36Q9P0J6 103 aaKnown RBP9.39□□□□□ -0.91
SMAD3-202ENST00000439724 A0A1W2PRD5 423 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 A0A1W2PRF3 423 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 A0A1W2PRM7 423 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 NDUFS8O00217 210 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 ACACBO00763 2458 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 CRYBA1P05813 215 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 GATA2P23769 480 aaPredicted RBP9.38□□□□□ -0.91
SMAD3-202ENST00000439724 ATP5G3P48201 142 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 UBE2E1P51965 193 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 TAS2R45P59539 299 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 UBE2G2P60604 165 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 SSX2Q16385 188 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 TMEM241Q24JQ0 296 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 C5orf64Q2M2E5 130 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 PQLC2Q6ZP29 291 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 DYNAPQ8N1N2 210 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 TMEM116Q8NCL8 245 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 C22orf15Q8WYQ4 148 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 MISP3Q96FF7 219 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 TRGV9Q99603 122 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms