RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 BAHCC1Q9P281 2608 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 TRAV9-2A0A087WT02 112 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 PRSS46E5RG02 174 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 KLRC4-KLRK1H3BQV0 150 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 APCSP02743 223 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 AREGP15514 252 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 CEBPDP49716 269 aaPredicted RBP7.05□□□□□ -1.28
HPS4-206ENST00000439453 ZNF146Q15072 292 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 WDR31Q8NA23 367 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 OR4F17Q8NGA8 305 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 OR4P4Q8NGL7 312 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 HEYLQ9NQ87 328 aaPredicted RBP7.05□□□□□ -1.28
HPS4-206ENST00000439453 FASNP49327 2511 aaKnown RBP7.04□□□□□ -1.28
HPS4-206ENST00000439453 IGKV3D-15A0A087WSY6 115 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 TRAV30A0A087WSZ9 112 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 H0Y8G0 127 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 CGAP01215 116 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 PPBPP02775 128 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 AARDQ4LEZ3 155 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 MUC15Q8N387 334 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 POLDIP2Q9Y2S7 368 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 CELSR2Q9HCU4 2923 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 AKAP9Q99996 3911 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 CRYBB3P26998 211 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 GDF1P27539 372 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 SELENOVP59797 346 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 C1orf159Q96HA4 380 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 HSD17B10Q99714 261 aaKnown RBP7.04□□□□□ -1.28
HPS4-206ENST00000439453 HINT2Q9BX68 163 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 IGHV3-64DA0A0J9YX35 117 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 OOEPA6NGQ2 149 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 M0QZ24 198 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 PSPNO60542 156 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 HAND1O96004 215 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 TUSC5Q8IXB3 177 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 GCNT2Q8N0V5 402 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 STPG3Q8N7X2 389 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 C18orf32Q8TCD1 76 aa7.04□□□□□ -1.28
HPS4-206ENST00000439453 MRPL27Q9P0M9 148 aaKnown RBP7.04□□□□□ -1.28
HPS4-206ENST00000439453 LSM4Q9Y4Z0 139 aaKnown RBP7.04□□□□□ -1.28
HPS4-206ENST00000439453 FBN2P35556 2912 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 TOX4O94842 621 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 IGLL1P15814 213 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 VDAC2P45880 294 aaPredicted RBP7.03□□□□□ -1.28
HPS4-206ENST00000439453 FABP6P51161 128 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 SRYQ05066 204 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 TIGITQ495A1 244 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 Q56UQ5 140 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 ABHD12Q8N2K0 398 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 OR4A16Q8NH70 328 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 NPVFQ9HCQ7 196 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 SMIM27A0A1W2PRY6 76 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 USF1P22415 310 aaPredicted RBP7.03□□□□□ -1.28
HPS4-206ENST00000439453 GABRA2P47869 451 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 AESQ08117 197 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 TNXAQ16473 311 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 PRAMEF5Q5TYX0 476 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 PRAMEF6Q5VXH4 476 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 DEFB127Q9H1M4 99 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 IGHV3-43A0A0B4J1X8 118 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 FAM181BA6NEQ2 426 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 H0YJW9 148 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 ISLRO14498 428 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 LINC00869P0C866 280 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 IGHV3-43DP0DP04 118 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 RELBQ01201 579 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 EBLN2Q6P2I7 272 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 RPRMLQ8N4K4 120 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 IL19Q9UHD0 177 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 PSG11Q9UQ72 335 aa7.03□□□□□ -1.28
HPS4-206ENST00000439453 TET2Q6N021 2002 aaPredicted RBP7.03□□□□□ -1.28
HPS4-206ENST00000439453 IZUMO1RA6ND01 250 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 HSBP1O75506 76 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 SLAQ13239 276 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 SLC35E4Q6ICL7 350 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 MIR17HGQ75NE6 70 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 CORO2AQ92828 525 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 ZNF331Q9NQX6 463 aaPredicted RBP7.02□□□□□ -1.29
HPS4-206ENST00000439453 ARL2-SNX15V9GYD0 113 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 VPS13CQ709C8 3753 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 HRNRQ86YZ3 2850 aaPredicted RBP7.02□□□□□ -1.29
HPS4-206ENST00000439453 DEFB108AA8MXU0 73 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 PSG5Q15238 335 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 CDSNQ15517 529 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 C3AR1Q16581 482 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 IBA57Q5T440 356 aaKnown RBP7.02□□□□□ -1.29
HPS4-206ENST00000439453 TEPPQ6URK8 271 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 ERASQ7Z444 233 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 OR8B3Q8NGG8 313 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 OR8B2Q96RD0 313 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 BOKQ9UMX3 212 aaPredicted RBP7.02□□□□□ -1.29
HPS4-206ENST00000439453 FAM90A9PA6NNJ1 464 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 M0R2Z0 102 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 FCGR3BO75015 233 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 ACTL6BO94805 426 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 UBE2G1P62253 170 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 RHOGP84095 191 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 FOXF2Q12947 444 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 LRRC10Q5BKY1 277 aa7.02□□□□□ -1.29
HPS4-206ENST00000439453 SEM1Q6ZVN7 128 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms