RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 BOLA2-SMG1P6H3BVE0 249 aa16.23■□□□□ 0.19
CHD3-204ENST00000439235 CST7O76096 145 aa16.23■□□□□ 0.19
CHD3-204ENST00000439235 PPIFP30405 207 aaKnown RBP16.23■□□□□ 0.19
CHD3-204ENST00000439235 EIF2B2P49770 351 aaKnown RBP16.23■□□□□ 0.19
CHD3-204ENST00000439235 ZNF345Q14585 488 aa16.23■□□□□ 0.19
CHD3-204ENST00000439235 OR8G2PQ6IF36 304 aa16.23■□□□□ 0.19
CHD3-204ENST00000439235 C19orf35Q6ZS72 473 aa16.23■□□□□ 0.19
CHD3-204ENST00000439235 PINX1Q96BK5 328 aaKnown RBP16.23■□□□□ 0.19
CHD3-204ENST00000439235 ZNF355PQ9NSJ1 428 aa16.23■□□□□ 0.19
CHD3-204ENST00000439235 THYN1Q9P016 225 aa16.23■□□□□ 0.19
CHD3-204ENST00000439235 DNHD1Q96M86 4753 aa16.22■□□□□ 0.19
CHD3-204ENST00000439235 MXRA5Q9NR99 2828 aa16.22■□□□□ 0.19
CHD3-204ENST00000439235 AP2S1P53680 142 aaPredicted RBP16.22■□□□□ 0.19
CHD3-204ENST00000439235 CFHR3Q02985 330 aa16.22■□□□□ 0.19
CHD3-204ENST00000439235 EXOSC2Q13868 293 aaKnown RBP16.22■□□□□ 0.19
CHD3-204ENST00000439235 OR4F5Q8NH21 305 aa16.22■□□□□ 0.19
CHD3-204ENST00000439235 MISP3Q96FF7 219 aa16.22■□□□□ 0.19
CHD3-204ENST00000439235 SERTAD4Q9NUC0 356 aa16.22■□□□□ 0.19
CHD3-204ENST00000439235 IGLV11-55A0A075B6I3 123 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 A0A0D9SG52 128 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 RPS10-NUDT3A0A1W2PQS6 291 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 PSMB11A5LHX3 300 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 PMS2P5A8MQ11 134 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 SOX15O60248 233 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 BRI3O95415 125 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 MFAP2P55001 183 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 SLC38A11Q08AI6 406 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 KLK9Q2XQG4 91 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 LILRB2Q8N423 598 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 TMEM217Q8N7C4 229 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 OR1S2Q8NGQ3 325 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 KLK9Q9UKQ9 250 aa16.21■□□□□ 0.19
CHD3-204ENST00000439235 TMEM89A2RUT3 159 aa16.2■□□□□ 0.18
CHD3-204ENST00000439235 PRH1P02810 166 aa16.2■□□□□ 0.18
CHD3-204ENST00000439235 S100A11P31949 105 aa16.2■□□□□ 0.18
CHD3-204ENST00000439235 OPRK1P41145 380 aa16.2■□□□□ 0.18
CHD3-204ENST00000439235 NHLH2Q02577 135 aa16.2■□□□□ 0.18
CHD3-204ENST00000439235 ETFRF1Q6IPR1 90 aa16.2■□□□□ 0.18
CHD3-204ENST00000439235 KCNRGQ8N5I3 272 aa16.2■□□□□ 0.18
CHD3-204ENST00000439235 FANCD2OSQ96PS1 177 aa16.2■□□□□ 0.18
CHD3-204ENST00000439235 SLA2Q9H6Q3 261 aa16.2■□□□□ 0.18
CHD3-204ENST00000439235 DMRT1Q9Y5R6 373 aa16.2■□□□□ 0.18
CHD3-204ENST00000439235 PRSS46E5RG02 174 aa16.19■□□□□ 0.18
CHD3-204ENST00000439235 IGLV1-40P01703 118 aa16.19■□□□□ 0.18
CHD3-204ENST00000439235 IGHG4P01861 327 aa16.19■□□□□ 0.18
CHD3-204ENST00000439235 CXCL2P19875 107 aa16.19■□□□□ 0.18
CHD3-204ENST00000439235 NKX2-5P52952 324 aaPredicted RBP16.19■□□□□ 0.18
CHD3-204ENST00000439235 DLK1P80370 383 aa16.19■□□□□ 0.18
CHD3-204ENST00000439235 ATP6V1FQ16864 119 aa16.19■□□□□ 0.18
CHD3-204ENST00000439235 CENPVQ7Z7K6 275 aaPredicted RBP16.19■□□□□ 0.18
CHD3-204ENST00000439235 HAPLN4Q86UW8 402 aa16.19■□□□□ 0.18
CHD3-204ENST00000439235 C9orf62Q8N4C0 152 aa16.19■□□□□ 0.18
CHD3-204ENST00000439235 OR5C1Q8NGR4 320 aa16.19■□□□□ 0.18
CHD3-204ENST00000439235 GGACTQ9BVM4 153 aa16.19■□□□□ 0.18
CHD3-204ENST00000439235 PLXNB1O43157 2135 aa16.19■□□□□ 0.18
CHD3-204ENST00000439235 FBN3Q75N90 2809 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 TRBV9A0A0B4J1U6 114 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 FAM223BA6NKX1 122 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 OR2J3O76001 311 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 PF4V1P10720 104 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 C4BPBP20851 252 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 GPX4P36969 197 aaPredicted RBP16.18■□□□□ 0.18
CHD3-204ENST00000439235 CD69Q07108 199 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 ARL16Q0P5N6 197 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 TEX38Q6PEX7 206 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 SLC16A13Q7RTY0 426 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 FAM223AQ8IWN6 122 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 COMMD1Q8N668 190 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 NECAP1Q8NC96 275 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 LINC01006Q8NI28 216 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 CACNG8Q8WXS5 425 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 TAF15Q92804 592 aaKnown RBP eCLIP16.18■□□□□ 0.18
CHD3-204ENST00000439235 ARL6Q9H0F7 186 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 FBXL17Q9UF56 701 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 FBXL7Q9UJT9 491 aa16.18■□□□□ 0.18
CHD3-204ENST00000439235 FNDC10F2Z333 226 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 DFFBO76075 338 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 MT-CO2P00403 227 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 TRGV3P03979 118 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 ELANEP08246 267 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 TPPP2P59282 170 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 RHOGP84095 191 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 SRSF2Q01130 221 aaKnown RBP16.17■□□□□ 0.18
CHD3-204ENST00000439235 FOXE3Q13461 319 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 LGALSLQ3ZCW2 172 aaPredicted RBP16.17■□□□□ 0.18
CHD3-204ENST00000439235 ZNF329Q86UD4 541 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 SLC35E1Q96K37 410 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 MS4A10Q96PG2 267 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 ATP5SQ99766 215 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 TMEM147Q9BVK8 224 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 SMIM3Q9BZL3 60 aa16.17■□□□□ 0.18
CHD3-204ENST00000439235 KANTRA0A1W2PQU2 76 aa16.16■□□□□ 0.18
CHD3-204ENST00000439235 I3L2K1 104 aa16.16■□□□□ 0.18
CHD3-204ENST00000439235 TAAR5O14804 337 aa16.16■□□□□ 0.18
CHD3-204ENST00000439235 CLINT1Q14677 625 aa16.16■□□□□ 0.18
CHD3-204ENST00000439235 TMUB2Q71RG4 321 aa16.16■□□□□ 0.18
CHD3-204ENST00000439235 BSCL2Q96G97 398 aaPredicted RBP16.16■□□□□ 0.18
CHD3-204ENST00000439235 ARPC5LQ9BPX5 153 aa16.16■□□□□ 0.18
CHD3-204ENST00000439235 FNDC4Q9H6D8 234 aaPredicted RBP16.16■□□□□ 0.18
CHD3-204ENST00000439235 A0A1B0GUS0 222 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms