RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 CTSGP08311 255 aa10.03□□□□□ -0.8
LINC00399-201ENST00000439008 FOLR2P14207 255 aa10.03□□□□□ -0.8
LINC00399-201ENST00000439008 PPP1R1AQ13522 171 aa10.03□□□□□ -0.8
LINC00399-201ENST00000439008 BSXQ3C1V8 233 aa10.03□□□□□ -0.8
LINC00399-201ENST00000439008 CD300EQ496F6 205 aaPredicted RBP10.03□□□□□ -0.8
LINC00399-201ENST00000439008 TMEM128Q5BJH2 165 aa10.03□□□□□ -0.8
LINC00399-201ENST00000439008 FAM219AQ8IW50 185 aa10.03□□□□□ -0.8
LINC00399-201ENST00000439008 RNASE11Q8TAA1 199 aaKnown RBP10.03□□□□□ -0.8
LINC00399-201ENST00000439008 DEDD2Q8WXF8 326 aa10.03□□□□□ -0.8
LINC00399-201ENST00000439008 IL22RA2Q969J5 263 aa10.03□□□□□ -0.8
LINC00399-201ENST00000439008 SCGB3A2Q96PL1 93 aa10.03□□□□□ -0.8
LINC00399-201ENST00000439008 ZNF436Q9C0F3 470 aaPredicted RBP10.03□□□□□ -0.8
LINC00399-201ENST00000439008 FNDC4Q9H6D8 234 aaPredicted RBP10.03□□□□□ -0.8
LINC00399-201ENST00000439008 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.03□□□□□ -0.8
LINC00399-201ENST00000439008 THYN1Q9P016 225 aa10.03□□□□□ -0.8
LINC00399-201ENST00000439008 ZMAT5Q9UDW3 170 aaKnown RBP10.03□□□□□ -0.8
LINC00399-201ENST00000439008 NBEAL2Q6ZNJ1 2754 aa10.03□□□□□ -0.8
LINC00399-201ENST00000439008 IGHV3OR16-8A0A075B7F1 116 aa10.02□□□□□ -0.81
LINC00399-201ENST00000439008 ZNF320A2RRD8 509 aa10.02□□□□□ -0.81
LINC00399-201ENST00000439008 ZNF785A8K8V0 405 aa10.02□□□□□ -0.81
LINC00399-201ENST00000439008 A8MWP6 167 aa10.02□□□□□ -0.81
LINC00399-201ENST00000439008 NDUFB6O95139 128 aa10.02□□□□□ -0.81
LINC00399-201ENST00000439008 SPCS3P61009 180 aa10.02□□□□□ -0.81
LINC00399-201ENST00000439008 TATDN3Q17R31 274 aa10.02□□□□□ -0.81
LINC00399-201ENST00000439008 DEFB114Q30KQ6 69 aa10.02□□□□□ -0.81
LINC00399-201ENST00000439008 TRIQKQ629K1 86 aa10.02□□□□□ -0.81
LINC00399-201ENST00000439008 PLET1Q6UQ28 207 aa10.02□□□□□ -0.81
LINC00399-201ENST00000439008 B9D2Q9BPU9 175 aa10.02□□□□□ -0.81
LINC00399-201ENST00000439008 SLC25A21Q9BQT8 299 aaPredicted RBP10.02□□□□□ -0.81
LINC00399-201ENST00000439008 MLXQ9UH92 298 aa10.02□□□□□ -0.81
LINC00399-201ENST00000439008 KCNIP3Q9Y2W7 256 aa10.02□□□□□ -0.81
LINC00399-201ENST00000439008 A0A0B4J2A0 478 aa10.01□□□□□ -0.81
LINC00399-201ENST00000439008 CBLN1P23435 193 aa10.01□□□□□ -0.81
LINC00399-201ENST00000439008 HOXA1P49639 335 aaPredicted RBP10.01□□□□□ -0.81
LINC00399-201ENST00000439008 ERHP84090 104 aaKnown RBP10.01□□□□□ -0.81
LINC00399-201ENST00000439008 UBAC2Q8NBM4 344 aa10.01□□□□□ -0.81
LINC00399-201ENST00000439008 OR1L6Q8NGR2 347 aa10.01□□□□□ -0.81
LINC00399-201ENST00000439008 OR52E5Q8NH55 327 aa10.01□□□□□ -0.81
LINC00399-201ENST00000439008 PINX1Q96BK5 328 aaKnown RBP10.01□□□□□ -0.81
LINC00399-201ENST00000439008 BSCL2Q96G97 398 aaPredicted RBP10.01□□□□□ -0.81
LINC00399-201ENST00000439008 PEMTQ9UBM1 199 aa10.01□□□□□ -0.81
LINC00399-201ENST00000439008 SHPKQ9UHJ6 478 aa10.01□□□□□ -0.81
LINC00399-201ENST00000439008 PITX3O75364 302 aa10□□□□□ -0.81
LINC00399-201ENST00000439008 SFT2D2O95562 160 aa10□□□□□ -0.81
LINC00399-201ENST00000439008 C8orf88P0DMB2 117 aa10□□□□□ -0.81
LINC00399-201ENST00000439008 SULT1A3P0DMM9 295 aa10□□□□□ -0.81
LINC00399-201ENST00000439008 SULT1A4P0DMN0 295 aa10□□□□□ -0.81
LINC00399-201ENST00000439008 VAMP1P23763 118 aa10□□□□□ -0.81
LINC00399-201ENST00000439008 FCGR2BP31994 310 aaPredicted RBP10□□□□□ -0.81
LINC00399-201ENST00000439008 RBMS2Q15434 407 aaKnown RBP10□□□□□ -0.81
LINC00399-201ENST00000439008 FAM106AQ4KMX7 169 aa10□□□□□ -0.81
LINC00399-201ENST00000439008 Q56UQ5 140 aa10□□□□□ -0.81
LINC00399-201ENST00000439008 LGI3Q8N145 548 aa10□□□□□ -0.81
LINC00399-201ENST00000439008 CENPSQ8N2Z9 138 aa10□□□□□ -0.81
LINC00399-201ENST00000439008 UXS1Q8NBZ7 420 aa10□□□□□ -0.81
LINC00399-201ENST00000439008 TMEM190Q8WZ59 177 aa10□□□□□ -0.81
LINC00399-201ENST00000439008 ASCL2Q99929 193 aa10□□□□□ -0.81
LINC00399-201ENST00000439008 CYB5BO43169 146 aa9.99□□□□□ -0.81
LINC00399-201ENST00000439008 ZNF207O43670 478 aaKnown RBP9.99□□□□□ -0.81
LINC00399-201ENST00000439008 ANXA7P20073 488 aaKnown RBP9.99□□□□□ -0.81
LINC00399-201ENST00000439008 SNCAP37840 140 aa9.99□□□□□ -0.81
LINC00399-201ENST00000439008 MFAP4P55083 255 aa9.99□□□□□ -0.81
LINC00399-201ENST00000439008 TNFRSF9Q07011 255 aa9.99□□□□□ -0.81
LINC00399-201ENST00000439008 SMCO1Q147U7 214 aa9.99□□□□□ -0.81
LINC00399-201ENST00000439008 SPSB3Q6PJ21 355 aa9.99□□□□□ -0.81
LINC00399-201ENST00000439008 TMEM61Q8N0U2 210 aa9.99□□□□□ -0.81
LINC00399-201ENST00000439008 LRTM2Q8N967 370 aa9.99□□□□□ -0.81
LINC00399-201ENST00000439008 WDR89Q96FK6 387 aaPredicted RBP9.99□□□□□ -0.81
LINC00399-201ENST00000439008 ATP6V0BQ99437 205 aa9.99□□□□□ -0.81
LINC00399-201ENST00000439008 PDCD10Q9BUL8 212 aa9.99□□□□□ -0.81
LINC00399-201ENST00000439008 RBKSQ9H477 322 aa9.99□□□□□ -0.81
LINC00399-201ENST00000439008 HSPB7Q9UBY9 170 aa9.99□□□□□ -0.81
LINC00399-201ENST00000439008 SMAD5-AS1Q9Y6J3 95 aa9.99□□□□□ -0.81
LINC00399-201ENST00000439008 HUWE1Q7Z6Z7 4374 aaKnown RBP9.98□□□□□ -0.81
LINC00399-201ENST00000439008 C9orf170A2RU37 121 aa9.98□□□□□ -0.81
LINC00399-201ENST00000439008 NAP1L6A6NFF2 107 aa9.98□□□□□ -0.81
LINC00399-201ENST00000439008 MPTX1A8MV57 137 aa9.98□□□□□ -0.81
LINC00399-201ENST00000439008 INPP1P49441 399 aa9.98□□□□□ -0.81
LINC00399-201ENST00000439008 CD69Q07108 199 aa9.98□□□□□ -0.81
LINC00399-201ENST00000439008 BTNL8Q6UX41 500 aa9.98□□□□□ -0.81
LINC00399-201ENST00000439008 SBSPONQ8IVN8 264 aa9.98□□□□□ -0.81
LINC00399-201ENST00000439008 HEYLQ9NQ87 328 aaPredicted RBP9.98□□□□□ -0.81
LINC00399-201ENST00000439008 A0A1B0GU03 582 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 CEBPZOSA8MTT3 80 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 NDUFA4O00483 81 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 ADAP1O75689 374 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 TMEM50AO95807 157 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 CD7P09564 240 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 FRMD6-AS1P0C7T7 363 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 IGHV4-30-4P0DP06 118 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 ANXA3P12429 323 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 SRPXP78539 464 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 DHRS2Q13268 280 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 C2orf83Q53S99 150 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 LCN12Q6JVE5 192 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 DYNLRB2Q8TF09 96 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 TXN2Q99757 166 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 WFDC10AQ9H1F0 79 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 ENY2Q9NPA8 101 aa9.97□□□□□ -0.81
LINC00399-201ENST00000439008 C19orf73Q9NVV2 129 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms