RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ZNF672Q499Z4 452 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 HEPN1Q6WQI6 88 aa9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 FAM216AQ8WUB2 273 aa9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 CHODLQ9H9P2 273 aa9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 CBLN1P23435 193 aa9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 OR2D3Q8NGH3 330 aa9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 TUBA4BQ9H853 241 aa9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 MBNL3Q9NUK0 354 aaKnown RBP9.58□□□□□ -0.88
TRAPPC9-202ENST00000438773 SLC25A5P05141 298 aaKnown RBP9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 TEX29Q8N6K0 151 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 SSBP3Q9BWW4 388 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 DIRC3C9JPN6 131 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 HIST1H2BKO60814 126 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 HIST1H2BJP06899 126 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 HIST1H2BOP23527 126 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 HIST1H2BBP33778 126 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 GPX4P36969 197 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 RND2P52198 227 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 HIST1H2BDP58876 126 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 ERVK11-1P61568 191 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 HIST1H2BCP62807 126 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 HIST2H2BEQ16778 126 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 NMSQ5H8A3 153 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 HIST1H2BHQ93079 126 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 HIST1H2BNQ99877 126 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 HIST1H2BMQ99879 126 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 PARLQ9H300 379 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 PRRC2CQ9Y520 2896 aaKnown RBP9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 E7EQL1 145 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 H3BTX0 84 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 SIAH2O43255 324 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 CXorf1O96002 111 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 CA2P00918 260 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 LINC00205P59089 165 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 LCN2P80188 198 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 OR8I2Q8N0Y5 310 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 OR51G1Q8NGK1 321 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 RNF2Q99496 336 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 SMDT1Q9H4I9 107 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 TNFRSF19Q9NS68 423 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 DMDP11532 3685 aa9.57□□□□□ -0.88
TRAPPC9-202ENST00000438773 SRP19P09132 144 aaKnown RBP9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 LINC00869P0C866 280 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 ECSCRQ19T08 205 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 OR4F17Q8NGA8 305 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 RCC1LQ96I51 464 aaKnown RBP9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 FGF23Q9GZV9 251 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 DCAF16Q9NXF7 216 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 DPM3Q9P2X0 92 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 CCDC168Q8NDH2 2452 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 IGKV1-5P01602 117 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 DMRTA1Q5VZB9 504 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 C10orf113Q5VZT2 155 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 KLHDC1Q8N7A1 406 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 SLC17A3O00476 420 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 CD55P08174 381 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 HOXA5P20719 270 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 ZNF788Q6ZQV5 615 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 Q6ZSR3 168 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 NAGKQ9UJ70 344 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 M0R2Z0 102 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 LY6HO94772 140 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 RPLP1P05386 114 aaKnown RBP9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 LMO1P25800 156 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 PDLIM4P50479 330 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 ZNF525Q8N782 197 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 PSMG3Q9BT73 122 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 WNT10AQ9GZT5 417 aa9.56□□□□□ -0.88
TRAPPC9-202ENST00000438773 CSPG4Q6UVK1 2322 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 SMAD7O15105 426 aaKnown RBP9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 RBFOX2O43251 390 aaKnown RBP eCLIP9.55□□□□□ -0.882e-6■■■■■ 28.3
TRAPPC9-202ENST00000438773 TFPI2P48307 235 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 PPOXP50336 477 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 MFAP2P55001 183 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 TCF23Q7RTU1 214 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 REC114Q7Z4M0 266 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 FBXL15Q9H469 300 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 TMSB15BA0A087X1C1 80 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 ZNF785A8K8V0 405 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 FAM106CPP0CH98 169 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 LRRC75BQ2VPJ9 315 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 KRTAP27-1Q3LI81 207 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 PDPNQ86YL7 162 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 GAFA1Q96PS6 74 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 TMEM133Q9H2Q1 129 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 B4DEV8 164 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 CGAP01215 116 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 GATAD1Q8WUU5 269 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 NPIPB3Q92617 1050 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 PERPQ96FX8 193 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 AAMDCQ9H7C9 122 aa9.55□□□□□ -0.88
TRAPPC9-202ENST00000438773 FOXH1O75593 365 aa9.54□□□□□ -0.88
TRAPPC9-202ENST00000438773 SAA1P0DJI8 122 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC9-202ENST00000438773 ELOBQ15370 118 aa9.54□□□□□ -0.88
TRAPPC9-202ENST00000438773 ST6GALNAC6Q969X2 333 aa9.54□□□□□ -0.88
TRAPPC9-202ENST00000438773 YPEL4Q96NS1 127 aa9.54□□□□□ -0.88
TRAPPC9-202ENST00000438773 PIMREGQ9BSJ6 248 aa9.54□□□□□ -0.88
TRAPPC9-202ENST00000438773 VSIRQ9H7M9 311 aa9.54□□□□□ -0.88
TRAPPC9-202ENST00000438773 A0A0G2JRQ6 117 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms