RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ANXA3P12429 323 aa18.72■□□□□ 0.59
RAPGEF1-206ENST00000438647 SUB1P53999 127 aaKnown RBP eCLIP18.72■□□□□ 0.59
RAPGEF1-206ENST00000438647 Q8N1Y9 231 aa18.72■□□□□ 0.59
RAPGEF1-206ENST00000438647 TMEM230Q96A57 120 aa18.72■□□□□ 0.59
RAPGEF1-206ENST00000438647 CACFD1Q9UGQ2 172 aa18.72■□□□□ 0.59
RAPGEF1-206ENST00000438647 PIGBOS1A0A0B4J2F0 54 aa18.71■□□□□ 0.59
RAPGEF1-206ENST00000438647 IGHV3-35A0A0C4DH35 117 aa18.71■□□□□ 0.59
RAPGEF1-206ENST00000438647 IZUMO1RA6ND01 250 aa18.71■□□□□ 0.59
RAPGEF1-206ENST00000438647 I3L2K1 104 aa18.71■□□□□ 0.59
RAPGEF1-206ENST00000438647 FRMD6-AS1P0C7T7 363 aa18.71■□□□□ 0.59
RAPGEF1-206ENST00000438647 AKR1C4P17516 323 aa18.71■□□□□ 0.59
RAPGEF1-206ENST00000438647 FCGR2BP31994 310 aaPredicted RBP18.71■□□□□ 0.59
RAPGEF1-206ENST00000438647 MFAP4P55083 255 aa18.71■□□□□ 0.59
RAPGEF1-206ENST00000438647 AARDQ4LEZ3 155 aa18.71■□□□□ 0.59
RAPGEF1-206ENST00000438647 UNQ9165/PRO28630Q6UXU0 137 aa18.71■□□□□ 0.59
RAPGEF1-206ENST00000438647 OR52E5Q8NH55 327 aa18.71■□□□□ 0.59
RAPGEF1-206ENST00000438647 TXN2Q99757 166 aa18.71■□□□□ 0.59
RAPGEF1-206ENST00000438647 NDUFA4O00483 81 aa18.7■□□□□ 0.58
RAPGEF1-206ENST00000438647 MT-CO2P00403 227 aa18.7■□□□□ 0.58
RAPGEF1-206ENST00000438647 SPCS3P61009 180 aa18.7■□□□□ 0.58
RAPGEF1-206ENST00000438647 TMEM187Q14656 261 aa18.7■□□□□ 0.58
RAPGEF1-206ENST00000438647 Q6ZRM9 215 aa18.7■□□□□ 0.58
RAPGEF1-206ENST00000438647 UXS1Q8NBZ7 420 aa18.7■□□□□ 0.58
RAPGEF1-206ENST00000438647 CACNG8Q8WXS5 425 aa18.7■□□□□ 0.58
RAPGEF1-206ENST00000438647 TMEM190Q8WZ59 177 aa18.7■□□□□ 0.58
RAPGEF1-206ENST00000438647 PINX1Q96BK5 328 aaKnown RBP18.7■□□□□ 0.58
RAPGEF1-206ENST00000438647 ASCL2Q99929 193 aa18.7■□□□□ 0.58
RAPGEF1-206ENST00000438647 SLC25A21Q9BQT8 299 aaPredicted RBP18.7■□□□□ 0.58
RAPGEF1-206ENST00000438647 SRRQ9GZT4 340 aa18.7■□□□□ 0.58
RAPGEF1-206ENST00000438647 MRPL27Q9P0M9 148 aaKnown RBP18.7■□□□□ 0.58
RAPGEF1-206ENST00000438647 A8MZ25 164 aa18.69■□□□□ 0.58
RAPGEF1-206ENST00000438647 F8W735 103 aaPredicted RBP18.69■□□□□ 0.58
RAPGEF1-206ENST00000438647 CORTO00230 105 aa18.69■□□□□ 0.58
RAPGEF1-206ENST00000438647 NUPL2O15504 423 aaKnown RBP18.69■□□□□ 0.58
RAPGEF1-206ENST00000438647 IGHV4-30-4P0DP06 118 aa18.69■□□□□ 0.58
RAPGEF1-206ENST00000438647 EDN2P20800 178 aa18.69■□□□□ 0.58
RAPGEF1-206ENST00000438647 SRPXP78539 464 aa18.69■□□□□ 0.58
RAPGEF1-206ENST00000438647 TM4SF20Q53R12 229 aa18.69■□□□□ 0.58
RAPGEF1-206ENST00000438647 ZNF57Q68EA5 555 aaPredicted RBP18.69■□□□□ 0.58
RAPGEF1-206ENST00000438647 CHRDL1Q9BU40 450 aa18.69■□□□□ 0.58
RAPGEF1-206ENST00000438647 CACNG5Q9UF02 275 aa18.69■□□□□ 0.58
RAPGEF1-206ENST00000438647 INPP1P49441 399 aa18.68■□□□□ 0.58
RAPGEF1-206ENST00000438647 RELQ04864 619 aaPredicted RBP18.68■□□□□ 0.58
RAPGEF1-206ENST00000438647 GPR146Q96CH1 333 aa18.68■□□□□ 0.58
RAPGEF1-206ENST00000438647 DAZ1Q9NQZ3 744 aaKnown RBP18.68■□□□□ 0.58
RAPGEF1-206ENST00000438647 C8orf88P0DMB2 117 aa18.67■□□□□ 0.58
RAPGEF1-206ENST00000438647 GUCA2BQ16661 112 aa18.67■□□□□ 0.58
RAPGEF1-206ENST00000438647 TRIQKQ629K1 86 aa18.67■□□□□ 0.58
RAPGEF1-206ENST00000438647 TMED4Q7Z7H5 227 aa18.67■□□□□ 0.58
RAPGEF1-206ENST00000438647 LGI3Q8N145 548 aa18.67■□□□□ 0.58
RAPGEF1-206ENST00000438647 U3KQK5 164 aa18.67■□□□□ 0.58
RAPGEF1-206ENST00000438647 A0A0B4J2A0 478 aa18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 ZNF785A8K8V0 405 aa18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 CTSGP08311 255 aa18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 SULT1A3P0DMM9 295 aa18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 SULT1A4P0DMN0 295 aa18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 RNASE2P10153 161 aaKnown RBP18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 ADMP35318 185 aa18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 NPBWR1P48145 328 aa18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 SUPT4H1P63272 117 aaKnown RBP18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 TMEM128Q5BJH2 165 aa18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 SBSPONQ8IVN8 264 aa18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 DUSP18Q8NEJ0 188 aa18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 MLXQ9UH92 298 aa18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 SHPKQ9UHJ6 478 aa18.66■□□□□ 0.58
RAPGEF1-206ENST00000438647 GNG7O60262 68 aa18.65■□□□□ 0.58
RAPGEF1-206ENST00000438647 CD81P60033 236 aa18.65■□□□□ 0.58
RAPGEF1-206ENST00000438647 PVRIGQ6DKI7 326 aa18.65■□□□□ 0.58
RAPGEF1-206ENST00000438647 BTNL8Q6UX41 500 aa18.65■□□□□ 0.58
RAPGEF1-206ENST00000438647 C20orf24Q9BUV8 137 aa18.65■□□□□ 0.58
RAPGEF1-206ENST00000438647 TUBA4BQ9H853 241 aa18.65■□□□□ 0.58
RAPGEF1-206ENST00000438647 C19orf73Q9NVV2 129 aa18.65■□□□□ 0.58
RAPGEF1-206ENST00000438647 HTR2BP41595 481 aa18.64■□□□□ 0.57
RAPGEF1-206ENST00000438647 TMEM61Q8N0U2 210 aa18.64■□□□□ 0.57
RAPGEF1-206ENST00000438647 WDR89Q96FK6 387 aaPredicted RBP18.64■□□□□ 0.57
RAPGEF1-206ENST00000438647 NEURL2Q9BR09 285 aa18.64■□□□□ 0.57
RAPGEF1-206ENST00000438647 HEYLQ9NQ87 328 aaPredicted RBP18.64■□□□□ 0.57
RAPGEF1-206ENST00000438647 PRR13Q9NZ81 148 aa18.64■□□□□ 0.57
RAPGEF1-206ENST00000438647 HUWE1Q7Z6Z7 4374 aaKnown RBP18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 TRAV25A0A0B4J276 109 aa18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 NAP1L6A6NFF2 107 aa18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 C15orf62A8K5M9 175 aa18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 CEBPZOSA8MTT3 80 aa18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 K7EMT4 169 aa18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 IGHV3-48P01763 117 aa18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 CCR6P51684 374 aa18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 RBMS2Q15434 407 aaKnown RBP18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 BSXQ3C1V8 233 aa18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 RBPMS2Q6ZRY4 209 aaKnown RBP18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 SLC16A13Q7RTY0 426 aa18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 WWC2-AS2Q96NR7 200 aa18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 ZMAT4Q9H898 229 aa18.63■□□□□ 0.57
RAPGEF1-206ENST00000438647 DUXBA0A1W2PPF3 345 aa18.62■□□□□ 0.57
RAPGEF1-206ENST00000438647 OPRK1P41145 380 aa18.62■□□□□ 0.57
RAPGEF1-206ENST00000438647 ANKRD55Q3KP44 614 aa18.62■□□□□ 0.57
RAPGEF1-206ENST00000438647 NMSQ5H8A3 153 aa18.62■□□□□ 0.57
RAPGEF1-206ENST00000438647 LYZL2Q7Z4W2 148 aa18.62■□□□□ 0.57
RAPGEF1-206ENST00000438647 SCGB2A1O75556 95 aa18.61■□□□□ 0.57
RAPGEF1-206ENST00000438647 YIF1AO95070 293 aa18.61■□□□□ 0.57
RAPGEF1-206ENST00000438647 VAMP1P23763 118 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms