RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 CENPSQ8N2Z9 138 aa5.76□□□□□ -1.49
VPS50-203ENST00000436177 TMEM116Q8NCL8 245 aa5.76□□□□□ -1.49
VPS50-203ENST00000436177 OR1P1Q8NH06 330 aa5.76□□□□□ -1.49
VPS50-203ENST00000436177 SCARB1Q8WTV0 552 aa5.76□□□□□ -1.49
VPS50-203ENST00000436177 FCAMRQ8WWV6 532 aa5.76□□□□□ -1.49
VPS50-203ENST00000436177 SLC25A46Q96AG3 418 aa5.76□□□□□ -1.49
VPS50-203ENST00000436177 RNF183Q96D59 192 aa5.76□□□□□ -1.49
VPS50-203ENST00000436177 CHRDL1Q9BU40 450 aa5.76□□□□□ -1.49
VPS50-203ENST00000436177 RHPN1-AS1Q9BWJ2 59 aa5.76□□□□□ -1.49
VPS50-203ENST00000436177 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
VPS50-203ENST00000436177 MFFQ9GZY8 342 aa5.76□□□□□ -1.49
VPS50-203ENST00000436177 RNF167Q9H6Y7 350 aa5.76□□□□□ -1.49
VPS50-203ENST00000436177 C15orf61A6NNL5 157 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 MPTX1A8MV57 137 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 K7EIM0 57 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 DNASE2O00115 360 aaPredicted RBP5.75□□□□□ -1.49
VPS50-203ENST00000436177 IFNA4P05014 189 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 CD5P06127 495 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 HRH1P35367 487 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 SNCAP37840 140 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 RPL11P62913 178 aaKnown RBP5.75□□□□□ -1.49
VPS50-203ENST00000436177 KCTD21Q4G0X4 260 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 DHRS11Q6UWP2 260 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 SLC35G3Q8N808 338 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 GATAD1Q8WUU5 269 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 PINX1Q96BK5 328 aaKnown RBP5.75□□□□□ -1.49
VPS50-203ENST00000436177 FXYD6Q9H0Q3 95 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 TMEM231Q9H6L2 316 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 MAP6D1Q9H9H5 199 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 TMEM14BQ9NUH8 114 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 SMPXQ9UHP9 88 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 PLECQ15149 4684 aaKnown RBP5.75□□□□□ -1.49
VPS50-203ENST00000436177 ALMS1Q8TCU4 4167 aa5.75□□□□□ -1.49
VPS50-203ENST00000436177 IGHV3-49A0A0A0MS15 119 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 TRAV14DV4A0A0A6YYC5 116 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 IGHV7-4-1A0A0J9YVY3 117 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 ATG12O94817 140 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 MT-CO2P00403 227 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 PGAM2P15259 253 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 HLA-DMAP28067 261 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 RCVRNP35243 200 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 NPBWR1P48145 328 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 AKR1C2P52895 323 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 MFAP2P55001 183 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 ERHP84090 104 aaKnown RBP5.74□□□□□ -1.49
VPS50-203ENST00000436177 RBMS2Q15434 407 aaKnown RBP5.74□□□□□ -1.49
VPS50-203ENST00000436177 APRG1Q8IVJ8 170 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 CADM3Q8N126 398 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 GBGT1Q8N5D6 347 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 RNASE11Q8TAA1 199 aaKnown RBP5.74□□□□□ -1.49
VPS50-203ENST00000436177 PHLDA1Q8WV24 401 aaPredicted RBP5.74□□□□□ -1.49
VPS50-203ENST00000436177 NARS2Q96I59 477 aaKnown RBP5.74□□□□□ -1.49
VPS50-203ENST00000436177 RNF2Q99496 336 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 TXN2Q99757 166 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 RARRES2Q99969 163 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 PDCD10Q9BUL8 212 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 CSTL1Q9H114 145 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 ENY2Q9NPA8 101 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 FAM212BQ9NTI7 297 aaPredicted RBP5.74□□□□□ -1.49
VPS50-203ENST00000436177 FBXL17Q9UF56 701 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 LYSTQ99698 3801 aa5.74□□□□□ -1.49
VPS50-203ENST00000436177 IGHV3OR16-13A0A075B7E8 117 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 IGHV3-74A0A0B4J1X5 117 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 TMEM238LA0A1B0GVL6 79 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 CHEK1O14757 476 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 ST8SIA3O43173 380 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 CA1P00915 261 aaPredicted RBP5.73□□□□□ -1.49
VPS50-203ENST00000436177 CTSGP08311 255 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 FCGR2BP31994 310 aaPredicted RBP5.73□□□□□ -1.49
VPS50-203ENST00000436177 HOXA1P49639 335 aaPredicted RBP5.73□□□□□ -1.49
VPS50-203ENST00000436177 LSM3P62310 102 aaKnown RBP5.73□□□□□ -1.49
VPS50-203ENST00000436177 PRCDQ00LT1 54 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 EWSR1Q01844 656 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS50-203ENST00000436177 TCF24Q7RTU0 167 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 TBC1D26Q86UD7 250 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 SNX29P2Q8IUI4 249 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 DUSP18Q8NEJ0 188 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 C11orf45Q8TAV5 145 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 MRGPRFQ96AM1 343 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 NXF2Q9GZY0 626 aaKnown RBP5.73□□□□□ -1.49
VPS50-203ENST00000436177 SCPEP1Q9HB40 452 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 RABAC1Q9UI14 185 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 ANAPC10Q9UM13 185 aa5.73□□□□□ -1.49
VPS50-203ENST00000436177 I3L2K1 104 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 CORTO00230 105 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 IFNA17P01571 189 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 IGHV3-48P01763 117 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 APOA1P02647 267 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 NAT1P18440 290 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 EIF2B2P49770 351 aaKnown RBP5.72□□□□□ -1.49
VPS50-203ENST00000436177 SUB1P53999 127 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS50-203ENST00000436177 HSPE1P61604 102 aaKnown RBP5.72□□□□□ -1.49
VPS50-203ENST00000436177 TMEM187Q14656 261 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 TRIM16LQ309B1 348 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 RNASE10Q5GAN6 216 aaKnown RBP5.72□□□□□ -1.49
VPS50-203ENST00000436177 STHQ8IWL8 128 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 ZNF114Q8NC26 417 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 OR11H2Q8NH07 326 aa5.72□□□□□ -1.49
VPS50-203ENST00000436177 RRNAD1Q96FB5 475 aaKnown RBP5.72□□□□□ -1.49
VPS50-203ENST00000436177 GRAMD2BQ96HH9 432 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms