RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CD40P25942 277 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 ERHP84090 104 aaKnown RBP6.21□□□□□ -1.42
CPSF6-202ENST00000435070 IBA57Q5T440 356 aaKnown RBP6.21□□□□□ -1.42
CPSF6-202ENST00000435070 C5orf17Q8NAS9 161 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 TMEM45BQ96B21 275 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 MS4A5Q9H3V2 200 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 PLSCR4Q9NRQ2 329 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 WDR83OSQ9Y284 106 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 PRR14LQ5THK1 2151 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 TRBV9A0A0B4J1U6 114 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 IGHV3-43A0A0B4J1X8 118 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 PRSS1P07477 247 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 IGHV3-43DP0DP04 118 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 ZNF138P52744 262 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 TRIP6Q15654 476 aaKnown RBP6.21□□□□□ -1.42
CPSF6-202ENST00000435070 RFESDQ8TAC1 157 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 MRAP2Q96G30 205 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 ARFGEF3Q5TH69 2177 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 MUC22E2RYF6 1773 aaPredicted RBP6.21□□□□□ -1.42
CPSF6-202ENST00000435070 DYSFO75923 2080 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 SAA2-SAA4A0A096LPE2 208 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 COX7A2P2O60397 106 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 HOXA4Q00056 320 aaPredicted RBP6.2□□□□□ -1.42
CPSF6-202ENST00000435070 VWC2Q2TAL6 325 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 FOXL2NBQ6ZUU3 175 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 RPS19BP1Q86WX3 136 aaKnown RBP6.2□□□□□ -1.42
CPSF6-202ENST00000435070 VKORC1L1Q8N0U8 176 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 TMEM116Q8NCL8 245 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 RAB1CQ92928 201 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 ZNF71Q9NQZ8 489 aaPredicted RBP6.2□□□□□ -1.42
CPSF6-202ENST00000435070 A0A0J9YW62 118 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 C2orf70A6NJV1 201 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 PTGDSP41222 190 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 TMEM95Q3KNT9 176 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 TMEM54Q969K7 222 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 C15orf62A8K5M9 175 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 NGFP01138 241 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 CSN3P07498 182 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 CELA2AP08217 269 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 PRSS3P2Q8NHM4 247 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 FOXB1Q99853 325 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 OR2H1Q9GZK4 316 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 Q8N7P7 452 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 THYN1Q9P016 225 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 FREM2Q5SZK8 3169 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 NEURL1O76050 574 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 DGAT2L7PQ6IED9 249 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 OR4A5Q8NH83 315 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 MGST2Q99735 147 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 TMEM38BQ9NVV0 291 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 TRAV9-1A0A075B6T8 112 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 LGALS7P47929 136 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 TREML4Q6UXN2 200 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 Q6ZS49 121 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 MIR17HGQ75NE6 70 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 OR2Z1Q8NG97 314 aa6.2□□□□□ -1.42
CPSF6-202ENST00000435070 TMEM238LA0A1B0GVL6 79 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 A6NJY4 79 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 TFF1P04155 84 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 IGHV4-34P06331 123 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 ZNF137PP52743 207 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 GGTLC1Q9BX51 225 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 SRXN1Q9BYN0 137 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 MMP17Q9ULZ9 603 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A26D6RGX4 464 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 NDUFB3O43676 98 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 CD5LO43866 347 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 TM4SF20Q53R12 229 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 Q6ZSR3 168 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 ANKRD37Q7Z713 158 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 TPRX1Q8N7U7 411 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 SPSB4Q96A44 273 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 TAAR6Q96RI8 345 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 GDF5OSQ5U4N7 250 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 BHLHA15Q7RTS1 189 aaPredicted RBP6.19□□□□□ -1.42
CPSF6-202ENST00000435070 OR52E5Q8NH55 327 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 NPVFQ9HCQ7 196 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 AHRRA9YTQ3 701 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 G3V4G9 280 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 AZU1P20160 251 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 GPR183P32249 361 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 MEF2CQ06413 473 aaPredicted RBP6.19□□□□□ -1.42
CPSF6-202ENST00000435070 TBR1Q16650 682 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 ZNF766Q5HY98 468 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 PERPQ96FX8 193 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 PILRBQ9UKJ0 227 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 LOC102723996A0A087X1L8 192 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 F5H697 171 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 LEPROTL1O95214 131 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 EFNB3Q15768 340 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 ZNF391Q9UJN7 358 aa6.19□□□□□ -1.42
CPSF6-202ENST00000435070 PLCE1Q9P212 2302 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 CXCL13O43927 109 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 CACNG7P62955 275 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 HSD17B10Q99714 261 aaKnown RBP6.18□□□□□ -1.42
CPSF6-202ENST00000435070 CHRNA10Q9GZZ6 450 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 A0A1W2PRD5 423 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 A0A1W2PRF3 423 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 A0A1W2PRM7 423 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms