RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 OCM2P0CE71 109 aa0.24□□□□□ -2.37
LINC01239-201ENST00000433645 SKP1P63208 163 aa0.24□□□□□ -2.37
LINC01239-201ENST00000433645 TMED1Q13445 227 aa0.24□□□□□ -2.37
LINC01239-201ENST00000433645 OGFRL1Q5TC84 451 aaPredicted RBP0.24□□□□□ -2.37
LINC01239-201ENST00000433645 IQCF2Q8IXL9 164 aa0.24□□□□□ -2.37
LINC01239-201ENST00000433645 TMEM70Q9BUB7 260 aa0.24□□□□□ -2.37
LINC01239-201ENST00000433645 WDR61Q9GZS3 305 aaKnown RBP0.24□□□□□ -2.37
LINC01239-201ENST00000433645 DENND4CQ5VZ89 1909 aa0.24□□□□□ -2.37
LINC01239-201ENST00000433645 INMT-MINDY4F8WBC2 141 aa0.23□□□□□ -2.37
LINC01239-201ENST00000433645 SLC16A4O15374 487 aa0.23□□□□□ -2.37
LINC01239-201ENST00000433645 OR5G3P0C626 314 aa0.23□□□□□ -2.37
LINC01239-201ENST00000433645 COX5BP10606 129 aa0.23□□□□□ -2.37
LINC01239-201ENST00000433645 RHOGP84095 191 aa0.23□□□□□ -2.37
LINC01239-201ENST00000433645 TMEM156Q8N614 296 aa0.23□□□□□ -2.37
LINC01239-201ENST00000433645 OR2T4Q8NH00 348 aa0.23□□□□□ -2.37
LINC01239-201ENST00000433645 OPTNQ96CV9 577 aa0.23□□□□□ -2.37
LINC01239-201ENST00000433645 SNRNP200O75643 2136 aaKnown RBP0.23□□□□□ -2.37
LINC01239-201ENST00000433645 C9orf84Q5VXU9 1444 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 ZNF462Q96JM2 2506 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 OR2B3O76000 313 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 TCL1BO95988 128 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 IGKV1-5P01602 117 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 KCNJ8Q15842 424 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 SFXN4Q6P4A7 337 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 DPPA3Q6W0C5 159 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 MIR17HGQ75NE6 70 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 OOSP2Q86WS3 158 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 OR4E2Q8NGC2 313 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 RAB8BQ92930 207 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 C10orf95Q9H7T3 257 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 RASL12Q9NYN1 266 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 SBF1O95248 1867 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 MED12Q93074 2177 aa0.22□□□□□ -2.37
LINC01239-201ENST00000433645 SCN3AQ9NY46 2000 aa0.21□□□□□ -2.38
LINC01239-201ENST00000433645 LRRN3E7EW58 273 aa0.21□□□□□ -2.38
LINC01239-201ENST00000433645 M0QZ92 97 aa0.21□□□□□ -2.38
LINC01239-201ENST00000433645 SPI1P17947 270 aa0.21□□□□□ -2.38
LINC01239-201ENST00000433645 RHEBQ15382 184 aa0.21□□□□□ -2.38
LINC01239-201ENST00000433645 TERB2Q8NHR7 220 aa0.21□□□□□ -2.38
LINC01239-201ENST00000433645 C4orf3Q8WVX3 66 aa0.21□□□□□ -2.38
LINC01239-201ENST00000433645 ITFG2Q969R8 447 aa0.21□□□□□ -2.38
LINC01239-201ENST00000433645 ULBP3Q9BZM4 244 aa0.21□□□□□ -2.38
LINC01239-201ENST00000433645 FGFR1OP2Q9NVK5 253 aa0.21□□□□□ -2.38
LINC01239-201ENST00000433645 TAS2R4Q9NYW5 299 aa0.21□□□□□ -2.38
LINC01239-201ENST00000433645 USE1Q9NZ43 259 aa0.21□□□□□ -2.38
LINC01239-201ENST00000433645 AHNAKQ09666 5890 aaKnown RBP0.21□□□□□ -2.38
LINC01239-201ENST00000433645 MAST4O15021 2626 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 MAP3K5Q99683 1374 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 TRAV12-1A0A0B4J245 112 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 EVPLLA8MZ36 301 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 UBL3O95164 117 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 IFNA10P01566 189 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 CRYGAP11844 174 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 BLVRAP53004 296 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 CNBPP62633 177 aaKnown RBP0.2□□□□□ -2.38
LINC01239-201ENST00000433645 CD200R1LQ6Q8B3 271 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 FAM151BQ6UXP7 276 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 SFT2D1Q8WV19 159 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 GINS4Q9BRT9 223 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 UPF3BQ9BZI7 483 aaKnown RBP0.2□□□□□ -2.38
LINC01239-201ENST00000433645 ACER3Q9NUN7 267 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 HS3ST2Q9Y278 367 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 E9PCH4 1651 aa0.2□□□□□ -2.38
LINC01239-201ENST00000433645 COL1A1P02452 1464 aaPredicted RBP0.19□□□□□ -2.38
LINC01239-201ENST00000433645 TRBV6-8A0A0A6YYG3 113 aa0.19□□□□□ -2.38
LINC01239-201ENST00000433645 H0Y980 276 aa0.19□□□□□ -2.38
LINC01239-201ENST00000433645 ISG15P05161 165 aa0.19□□□□□ -2.38
LINC01239-201ENST00000433645 SSR2P43308 183 aa0.19□□□□□ -2.38
LINC01239-201ENST00000433645 MAGEA2P43356 314 aa0.19□□□□□ -2.38
LINC01239-201ENST00000433645 PMAIP1Q13794 54 aa0.19□□□□□ -2.38
LINC01239-201ENST00000433645 MPV17LQ2QL34 196 aa0.19□□□□□ -2.38
LINC01239-201ENST00000433645 KHDC3LQ587J8 217 aa0.19□□□□□ -2.38
LINC01239-201ENST00000433645 SOSTDC1Q6X4U4 206 aa0.19□□□□□ -2.38
LINC01239-201ENST00000433645 OR51I1Q9H343 314 aa0.19□□□□□ -2.38
LINC01239-201ENST00000433645 NHP2Q9NX24 153 aaKnown RBP0.19□□□□□ -2.38
LINC01239-201ENST00000433645 NAV3Q8IVL0 2385 aa0.19□□□□□ -2.38
LINC01239-201ENST00000433645 MTUS2Q5JR59 1369 aa0.19□□□□□ -2.38
LINC01239-201ENST00000433645 KCPQ6ZWJ8 1503 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 DCTN3O75935 186 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 LYZL6O75951 148 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 PRH1P02810 166 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 RPS12P25398 132 aaKnown RBP0.18□□□□□ -2.38
LINC01239-201ENST00000433645 CASQ1P31415 396 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 AP2S1P53680 142 aaPredicted RBP0.18□□□□□ -2.38
LINC01239-201ENST00000433645 HBA1P69905 142 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 C1orf137Q5JT78 98 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 PDPK2PQ6A1A2 396 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 LPCAT3Q6P1A2 487 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 ALKAL1Q6UXT8 129 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 SIGLECL1Q8N7X8 197 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 OR5A1Q8NGJ0 315 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 OR10J5Q8NHC4 309 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 TOMM6Q96B49 74 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 OR52E6Q96RD3 313 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 SMR3AQ99954 134 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 NIPSNAP1Q9BPW8 284 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 PRTFDC1Q9NRG1 225 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 FBXL12Q9NXK8 326 aa0.18□□□□□ -2.38
LINC01239-201ENST00000433645 LSM5Q9Y4Y9 91 aaKnown RBP0.18□□□□□ -2.38
LINC01239-201ENST00000433645 MUC5ACP98088 5654 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms