RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 POLR2JP52435 117 aaKnown RBP3.03□□□□□ -1.92
HMGB3-203ENST00000430118 CRISP3P54108 245 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 H2BFSP57053 126 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 UBE2NP61088 152 aaKnown RBP3.03□□□□□ -1.92
HMGB3-203ENST00000430118 DYNLT1P63172 113 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 FAM3AP98173 230 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 SSBP1Q04837 148 aaKnown RBP3.03□□□□□ -1.92
HMGB3-203ENST00000430118 ELOBQ15370 118 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 VAMP3Q15836 100 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 ACOT6Q3I5F7 207 aaPredicted RBP3.03□□□□□ -1.92
HMGB3-203ENST00000430118 ALKBH6Q3KRA9 238 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 LRRC10Q5BKY1 277 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 PAGE3Q5JUK9 113 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 UTF1Q5T230 341 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 TOMM20LQ6UXN7 152 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 Q6ZSR3 168 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 Q6ZTC4 211 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 SLC36A1Q7Z2H8 476 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 COMMD6Q7Z4G1 85 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 CMC1Q7Z7K0 106 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 LGI3Q8N145 548 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 LRRC25Q8N386 305 aaPredicted RBP3.03□□□□□ -1.92
HMGB3-203ENST00000430118 FAM71E2Q8N5Q1 922 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 CNEP1R1Q8N9A8 125 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 APCDD1LQ8NCL9 501 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 SLC26A10Q8NG04 563 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 OR51A2Q8NGJ7 313 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 OR52I1Q8NGK6 324 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 DOK4Q8TEW6 326 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 TWIST2Q8WVJ9 160 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 GTSF1Q8WW33 167 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 MS4A6EQ96DS6 147 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 MICU1Q9BPX6 476 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 TBL1YQ9BQ87 522 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 PSMG3Q9BT73 122 aaPredicted RBP3.03□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF702PQ9H963 129 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 FGF20Q9NP95 211 aaPredicted RBP3.03□□□□□ -1.92
HMGB3-203ENST00000430118 BET1LQ9NYM9 111 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 COMMD9Q9P000 198 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 CLN8Q9UBY8 286 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 ZNF230Q9UIE0 474 aaPredicted RBP3.03□□□□□ -1.92
HMGB3-203ENST00000430118 JPT1Q9UK76 154 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 C14orf166Q9Y224 244 aaKnown RBP3.03□□□□□ -1.92
HMGB3-203ENST00000430118 MRPS16Q9Y3D3 137 aaKnown RBP3.03□□□□□ -1.92
HMGB3-203ENST00000430118 TRRAPQ9Y4A5 3859 aa3.03□□□□□ -1.92
HMGB3-203ENST00000430118 KMT2CQ8NEZ4 4911 aaKnown RBP3.03□□□□□ -1.92
HMGB3-203ENST00000430118 ZANQ9Y493 2812 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 DSPPQ9NZW4 1301 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 A0A1W2PRS3 328 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 IGSF23A1L1A6 192 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 PINLYPA6NC86 204 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 OR6C6A6NF89 314 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 TMEM235A6NFC5 223 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF860A6NHJ4 632 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 A8MT66 165 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF705GA8MUZ8 300 aaPredicted RBP3.02□□□□□ -1.93
HMGB3-203ENST00000430118 UMAD1C9J7I0 102 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 RFXANKO14593 260 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 AZIN1O14977 448 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 IGHV3-48P01763 117 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 IGHV3-23P01764 117 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 IL3P08700 152 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 OR4A8P0C604 315 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 CCL3P10147 92 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 ESDP10768 282 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 ERGP11308 486 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 S100GP29377 79 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 S100A7P31151 101 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 MDH2P40926 338 aaKnown RBP3.02□□□□□ -1.93
HMGB3-203ENST00000430118 GPR6P46095 362 aaPredicted RBP3.02□□□□□ -1.93
HMGB3-203ENST00000430118 CX3CR1P49238 355 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 GZMMP51124 257 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 CKS1BP61024 79 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 UBE2KP61086 200 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 RPS25P62851 125 aaKnown RBP3.02□□□□□ -1.93
HMGB3-203ENST00000430118 BTG2P78543 158 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 AKR1C1Q04828 323 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 AESQ08117 197 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 EGFEM1PQ0D2K5 195 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 DHRS2Q13268 280 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 ATP6AP1LQ52LC2 224 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 VAX1Q5SQQ9 334 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 TMEM42Q69YG0 159 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 C12orf73Q69YU5 71 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 TRIM40Q6P9F5 258 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 SSX8Q7RTT4 187 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 PRSS41Q7RTY9 318 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 PIANPQ8IYJ0 282 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 CMTM1Q8IZ96 169 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF567Q8N184 647 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 ZNF525Q8N782 197 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 ACOT4Q8N9L9 421 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 CHST4Q8NCG5 386 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 MORN4Q8NDC4 146 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 KLHL30-AS1Q8NEE0 82 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 OR10G2Q8NGC3 310 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 OR6N1Q8NGY5 312 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 Q8WTZ3 238 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 TMEM239Q8WW34 195 aa3.02□□□□□ -1.93
HMGB3-203ENST00000430118 FRZBQ92765 325 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms