RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 MTFP1Q9UDX5 166 aa12.61□□□□□ -0.39
CPSF4-203ENST00000430038 IGKV3-7A0A075B6H7 116 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 FAM25AB3EWG3 89 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 FAM25CB3EWG5 89 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 FAM25GB3EWG6 89 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 SPRY2O43597 315 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 GABARAPO95166 117 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 TFPI2P48307 235 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 PIGPP57054 158 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 PVRIGQ6DKI7 326 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 Q6ZRM9 215 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 Q6ZWC4 215 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 LYG2Q86SG7 212 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 TMEM116Q8NCL8 245 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 PINX1Q96BK5 328 aaKnown RBP12.6□□□□□ -0.39
CPSF4-203ENST00000430038 EXTL2Q9UBQ6 330 aa12.6□□□□□ -0.39
CPSF4-203ENST00000430038 ST8SIA3O43173 380 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 YIF1AO95070 293 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 PGAM2P15259 253 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 GPR107Q5VW38 600 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 LAMTOR1Q6IAA8 161 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 TOMM20LQ6UXN7 152 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 GBGT1Q8N5D6 347 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 RNF183Q96D59 192 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 TXN2Q99757 166 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 MAP6D1Q9H9H5 199 aa12.59□□□□□ -0.39
CPSF4-203ENST00000430038 OR4C46A6NHA9 309 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 NUPL2O15504 423 aaKnown RBP12.58□□□□□ -0.4
CPSF4-203ENST00000430038 CD74P04233 296 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 ZNF182P17025 639 aaPredicted RBP12.58□□□□□ -0.4
CPSF4-203ENST00000430038 ETV6P41212 452 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 PPP5CP53041 499 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 TNFRSF9Q07011 255 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 PMS2P11Q13670 270 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 RNASE10Q5GAN6 216 aaKnown RBP12.58□□□□□ -0.4
CPSF4-203ENST00000430038 FAAP20Q6NZ36 180 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 ST8SIA2Q92186 375 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 FNDC4Q9H6D8 234 aaPredicted RBP12.58□□□□□ -0.4
CPSF4-203ENST00000430038 ZFAND3Q9H8U3 227 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 TP53TG1Q9Y2A0 90 aa12.58□□□□□ -0.4
CPSF4-203ENST00000430038 TRAV14DV4A0A0A6YYC5 116 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 IGHV3-66A0A0C4DH42 116 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 KIR2DL5BA0A0G2JN68 375 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 KIR2DL5BA0A0G2JPC4 375 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 C3orf85A0A1B0GTC6 90 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 A0A1B0GU03 582 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 CTDSP2O14595 271 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 JTBO76095 146 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 TMEM50AO95807 157 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 RNASE2P10153 161 aaKnown RBP12.57□□□□□ -0.4
CPSF4-203ENST00000430038 S100GP29377 79 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 BMI1P35226 326 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 APOC4P55056 127 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 RELQ04864 619 aaPredicted RBP12.57□□□□□ -0.4
CPSF4-203ENST00000430038 KIR2DL5AQ8N109 375 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 FAM24BQ8N5W8 94 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 OR13C8Q8NGS7 320 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 KIR2DL5BQ8NHK3 375 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 LHFPL5Q8TAF8 219 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 MARCH1Q8TCQ1 289 aa12.57□□□□□ -0.4
CPSF4-203ENST00000430038 INS-IGF2F8WCM5 200 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 GNG7O60262 68 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 ERHP84090 104 aaKnown RBP12.56□□□□□ -0.4
CPSF4-203ENST00000430038 SPCS2Q15005 226 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 MZT2AQ6P582 158 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 ARRDC1Q8N5I2 433 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 TERB2Q8NHR7 220 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 GALNT14Q96FL9 552 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 ZNF486Q96H40 463 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-203ENST00000430038 RTBDNQ9BSG5 229 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-203ENST00000430038 VSIRQ9H7M9 311 aa12.56□□□□□ -0.4
CPSF4-203ENST00000430038 UBE2CO00762 179 aa12.55□□□□□ -0.4
CPSF4-203ENST00000430038 DFFBO76075 338 aa12.55□□□□□ -0.4
CPSF4-203ENST00000430038 UCP1P25874 307 aa12.55□□□□□ -0.4
CPSF4-203ENST00000430038 STPG3Q8N7X2 389 aa12.55□□□□□ -0.4
CPSF4-203ENST00000430038 TMEM229BQ8NBD8 167 aa12.55□□□□□ -0.4
CPSF4-203ENST00000430038 LINC00476Q8WZB0 136 aa12.55□□□□□ -0.4
CPSF4-203ENST00000430038 PUS1Q9Y606 427 aaKnown RBP eCLIP12.55□□□□□ -0.4
CPSF4-203ENST00000430038 ALDH3B2P48448 385 aa12.54□□□□□ -0.4
CPSF4-203ENST00000430038 BSXQ3C1V8 233 aa12.54□□□□□ -0.4
CPSF4-203ENST00000430038 SCGB2B2Q4G0G5 96 aa12.54□□□□□ -0.4
CPSF4-203ENST00000430038 TCF24Q7RTU0 167 aa12.54□□□□□ -0.4
CPSF4-203ENST00000430038 GLYATL2Q8WU03 294 aa12.54□□□□□ -0.4
CPSF4-203ENST00000430038 CXorf65A6NEN9 183 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 RAB3DO95716 219 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 IFNA17P01571 189 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 AKR1C2P52895 323 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 STEAP1BQ6NZ63 245 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 CEMP1Q6PRD7 247 aaPredicted RBP12.53□□□□□ -0.4
CPSF4-203ENST00000430038 DUSP18Q8NEJ0 188 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 MS4A6AQ9H2W1 248 aa12.53□□□□□ -0.4
CPSF4-203ENST00000430038 CDS2O95674 445 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 OR5AC1P0C628 307 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 TBPP20226 339 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 SNCAP37840 140 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 TRIM16LQ309B1 348 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 SELENOHQ8IZQ5 122 aaKnown RBP12.52□□□□□ -0.41
CPSF4-203ENST00000430038 SLC35G3Q8N808 338 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 TMEM170AQ8WVE7 144 aa12.52□□□□□ -0.41
CPSF4-203ENST00000430038 AP3S1Q92572 193 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms