RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 ADAMTSL5Q6ZMM2 481 aa6.4□□□□□ -1.39
SYNPO2-202ENST00000429713 ZNF788Q6ZQV5 615 aa6.4□□□□□ -1.39
SYNPO2-202ENST00000429713 PMP22Q01453 160 aa6.4□□□□□ -1.39
SYNPO2-202ENST00000429713 CCDC144NLQ6NUI1 221 aa6.4□□□□□ -1.39
SYNPO2-202ENST00000429713 IMUPQ9GZP8 106 aa6.4□□□□□ -1.39
SYNPO2-202ENST00000429713 GNB4Q9HAV0 340 aa6.4□□□□□ -1.39
SYNPO2-202ENST00000429713 SPTY2D1-AS1A0A0U1RR47 76 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 CAMPP49913 170 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 ASPHD2Q6ICH7 369 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 PIN1P1O15428 100 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 DXOO77932 396 aaKnown RBP6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 DEFA4P12838 97 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 ASCL4Q6XD76 172 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 TEN1Q86WV5 123 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 DSCAMO60469 2012 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 ARL14EPLP0DKL9 152 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 UNQ5815/PRO19632Q6UWF5 114 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 STPG4Q8N801 248 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 ABHD17AQ96GS6 310 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 GRIFINA4D1Z8 144 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 SLC25A5P05141 298 aaKnown RBP6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 TMEM240Q5SV17 173 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 RPP21Q9H633 154 aaKnown RBP6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 SHISA3A0PJX4 238 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 PROB1E7EW31 1015 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 DPM2O94777 84 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 TRA2AQ13595 282 aaKnown RBP eCLIP6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 PDCD1Q15116 288 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 K7EQS6 105 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 DLL1O00548 723 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 DNAL4O96015 105 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 GAPTQ8N292 157 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 A6NNC1 897 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 ENSAO43768 121 aaKnown RBP6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 ATP5EP56381 51 aaPredicted RBP6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 KLF5Q13887 457 aaPredicted RBP6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 ORMDL2Q53FV1 153 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 FAM90A2PQ658T7 463 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 ERRFI1Q9UJM3 462 aaPredicted RBP6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 H0YIZ8 118 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 C8orf88P0DMB2 117 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 LYG1Q8N1E2 194 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 SH3BGRL3Q9H299 93 aa6.39□□□□□ -1.39
SYNPO2-202ENST00000429713 PPIAL4EA0A075B759 164 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 MSGN1A6NI15 193 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 PPIAL4FP0DN26 164 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 CEACAM21Q3KPI0 293 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 TPRX1Q8N7U7 411 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 TM4SF19Q96DZ7 209 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 THYN1Q9P016 225 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 PPIAL4AQ9Y536 164 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 RRHO14718 337 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 WNT16Q9UBV4 365 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 TRAV2A0A0B4J234 112 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 A0A1W2PPI3 338 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 METTL12A8MUP2 240 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 CCL2P13500 99 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 RAC3P60763 192 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 C11orf52Q96A22 123 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 ERG28Q9UKR5 140 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 GCHFRP30047 84 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 LGALS4P56470 323 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 PIGYQ3MUY2 71 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 SPATA12Q7Z6I5 190 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 TTC28Q96AY4 2481 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 MUC21A0A0G2JKD1 596 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 MUC21A0A140T8X8 626 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 MUC21Q5SSG8 566 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 UTF1Q5T230 341 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 IGHV3-64DA0A0J9YX35 117 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 FAM157AC9JC47 383 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 SMAD7O15105 426 aaKnown RBP6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 IL11P20809 199 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 MFAP4P55083 255 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 SRSF3P84103 164 aaKnown RBP6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 OR11H6Q8NGC7 330 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 CEACAM8P31997 349 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 VMA21Q3ZAQ7 101 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 FAM110AQ9BQ89 295 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 PLA2G2FQ9BZM2 168 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 C11orf68Q9H3H3 251 aaKnown RBP6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 TRAV8-2A0A0B4J237 113 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 M0R3E3 92 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 CDX4O14627 284 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 ACP1P24666 158 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 C10orf113Q5VZT2 155 aa6.38□□□□□ -1.39
SYNPO2-202ENST00000429713 TRBV6-6A0A0A6YYG2 114 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 M0QZ24 198 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 GZMHP20718 246 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 LINC01590Q5TEZ4 76 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 LRRC75AQ8NAA5 344 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 POLQO75417 2590 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 A0A1W2PPE3 182 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 LIPT2A6NK58 231 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 PTH2Q96A98 100 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 ZNF576Q9H609 170 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 TRAV8-4A0A0B4J246 113 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 TBX6O95947 436 aaPredicted RBP6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 C3orf79P0CE67 100 aa6.37□□□□□ -1.39
SYNPO2-202ENST00000429713 TMEM177Q53S58 311 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms