RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ST20Q9HBF5 79 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 NXT2Q9NPJ8 142 aaKnown RBP10.7□□□□□ -0.7
LDB3-205ENST00000429277 YAE1D1Q9NRH1 226 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 A0A0G2JMM0 328 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 A0A1W2PPB8 328 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 A0A1W2PRS3 328 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 KIR3DP1A8MWS1 328 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 IGHV3-23P01764 117 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 ZP1P60852 638 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 VWCEQ96DN2 955 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 PRDM6Q9NQX0 595 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 CKAP5Q14008 2032 aa10.7□□□□□ -0.7
LDB3-205ENST00000429277 SHISA3A0PJX4 238 aa10.69□□□□□ -0.7
LDB3-205ENST00000429277 TSPAN13O95857 204 aa10.69□□□□□ -0.7
LDB3-205ENST00000429277 OR9G9P0C7N8 305 aa10.69□□□□□ -0.7
LDB3-205ENST00000429277 LTBRP36941 435 aa10.69□□□□□ -0.7
LDB3-205ENST00000429277 LDLRAD2Q5SZI1 272 aa10.69□□□□□ -0.7
LDB3-205ENST00000429277 OVOL1O14753 267 aa10.69□□□□□ -0.7
LDB3-205ENST00000429277 RNASE4P34096 147 aaKnown RBP10.69□□□□□ -0.7
LDB3-205ENST00000429277 PRDM13Q9H4Q3 707 aa10.69□□□□□ -0.7
LDB3-205ENST00000429277 BEX4Q9NWD9 120 aaPredicted RBP10.69□□□□□ -0.7
LDB3-205ENST00000429277 FAM186AA6NE01 2351 aa10.69□□□□□ -0.7
LDB3-205ENST00000429277 FAM201AQ5SY85 155 aa10.69□□□□□ -0.7
LDB3-205ENST00000429277 TIMP3P35625 211 aa10.69□□□□□ -0.7
LDB3-205ENST00000429277 C10orf126Q8N4M7 172 aa10.69□□□□□ -0.7
LDB3-205ENST00000429277 RNF5Q99942 180 aa10.69□□□□□ -0.7
LDB3-205ENST00000429277 PARP14Q460N5 1801 aa10.69□□□□□ -0.7
LDB3-205ENST00000429277 IGHV3-49A0A0A0MS15 119 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 TRAV14DV4A0A0A6YYC5 116 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 A8MXK9 166 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 SLC25A20O43772 301 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 TDGF1P13385 188 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 ORMDL2Q53FV1 153 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 KIR3DL3Q8N743 410 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 C18orf15Q96N68 181 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 ATP5G3P48201 142 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 ZNF324BQ6AW86 544 aaPredicted RBP10.68□□□□□ -0.7
LDB3-205ENST00000429277 METRNQ9UJH8 293 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.68□□□□□ -0.7
LDB3-205ENST00000429277 RNF222A6NCQ9 220 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 SIGLEC5O15389 551 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 TMEM50AO95807 157 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 IGHV3-66A0A0C4DH42 116 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 TRBV7-9A0A0J9YWB2 115 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 F2Z2F3 143 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 SLC17A3O00476 420 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 TYMSP04818 313 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 EPDR1Q9UM22 224 aa10.68□□□□□ -0.7
LDB3-205ENST00000429277 HIGD1CA8MV81 97 aa10.67□□□□□ -0.7
LDB3-205ENST00000429277 WNT2P09544 360 aa10.67□□□□□ -0.7
LDB3-205ENST00000429277 ANKRD31Q8N7Z5 1873 aa10.67□□□□□ -0.7
LDB3-205ENST00000429277 SRSF1Q07955 248 aaKnown RBP eCLIP10.67□□□□□ -0.7
LDB3-205ENST00000429277 BEND2Q8NDZ0 799 aa10.67□□□□□ -0.7
LDB3-205ENST00000429277 WFIKKN1Q96NZ8 548 aa10.67□□□□□ -0.7
LDB3-205ENST00000429277 ZNF257Q9Y2Q1 563 aa10.67□□□□□ -0.7
LDB3-205ENST00000429277 ATOH7Q8N100 152 aa10.67□□□□□ -0.7
LDB3-205ENST00000429277 NTN3O00634 580 aaPredicted RBP10.67□□□□□ -0.7
LDB3-205ENST00000429277 CCL3L1P16619 93 aa10.67□□□□□ -0.7
LDB3-205ENST00000429277 TMEM42Q69YG0 159 aa10.67□□□□□ -0.7
LDB3-205ENST00000429277 CYSLTR1Q9Y271 337 aa10.67□□□□□ -0.7
LDB3-205ENST00000429277 CELA3BP08861 270 aa10.66□□□□□ -0.7
LDB3-205ENST00000429277 RHOGP84095 191 aa10.66□□□□□ -0.7
LDB3-205ENST00000429277 ID3Q02535 119 aa10.66□□□□□ -0.7
LDB3-205ENST00000429277 AKIRIN1Q9H9L7 192 aaPredicted RBP10.66□□□□□ -0.7
LDB3-205ENST00000429277 COL11A1P12107 1806 aaPredicted RBP10.66□□□□□ -0.7
LDB3-205ENST00000429277 CD7P09564 240 aa10.66□□□□□ -0.7
LDB3-205ENST00000429277 RPL23P62829 140 aaKnown RBP10.66□□□□□ -0.7
LDB3-205ENST00000429277 IMMP2LQ96T52 175 aa10.66□□□□□ -0.7
LDB3-205ENST00000429277 MALP21145 153 aa10.66□□□□□ -0.7
LDB3-205ENST00000429277 ATP5L2Q7Z4Y8 100 aa10.66□□□□□ -0.7
LDB3-205ENST00000429277 ZNF837Q96EG3 531 aaPredicted RBP10.66□□□□□ -0.7
LDB3-205ENST00000429277 HBDP02042 147 aa10.66□□□□□ -0.7
LDB3-205ENST00000429277 DUTP33316 252 aaKnown RBP10.66□□□□□ -0.7
LDB3-205ENST00000429277 MINOS1Q5TGZ0 78 aa10.66□□□□□ -0.7
LDB3-205ENST00000429277 C8orf46Q8TAG6 207 aa10.66□□□□□ -0.7
LDB3-205ENST00000429277 TOMM7Q9P0U1 55 aa10.66□□□□□ -0.7
LDB3-205ENST00000429277 MINOS1-NBL1R4GNA1 71 aa10.66□□□□□ -0.7
LDB3-205ENST00000429277 CDKN1AP38936 164 aa10.65□□□□□ -0.7
LDB3-205ENST00000429277 CTAG1AP78358 180 aa10.65□□□□□ -0.7
LDB3-205ENST00000429277 C20orf204Q6ZNR8 217 aa10.65□□□□□ -0.7
LDB3-205ENST00000429277 TMEM105Q8N8V8 129 aa10.65□□□□□ -0.7
LDB3-205ENST00000429277 TMEM170AQ8WVE7 144 aa10.65□□□□□ -0.7
LDB3-205ENST00000429277 WDR83OSQ9Y284 106 aa10.65□□□□□ -0.7
LDB3-205ENST00000429277 S4R3C0 116 aa10.65□□□□□ -0.7
LDB3-205ENST00000429277 IGHV1-18A0A0C4DH31 117 aa10.65□□□□□ -0.7
LDB3-205ENST00000429277 SLC25A2Q9BXI2 301 aa10.65□□□□□ -0.7
LDB3-205ENST00000429277 PSG8Q9UQ74 426 aa10.65□□□□□ -0.7
LDB3-205ENST00000429277 DTX1Q86Y01 620 aa10.65□□□□□ -0.7
LDB3-205ENST00000429277 C5orf30Q96GV9 206 aa10.65□□□□□ -0.7
LDB3-205ENST00000429277 IGHV3-11P01762 117 aa10.65□□□□□ -0.71
LDB3-205ENST00000429277 FAM71F2Q6NXP2 309 aa10.65□□□□□ -0.71
LDB3-205ENST00000429277 A0A1B0GWB2 263 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 OR5AN1Q8NGI8 311 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 RNF182Q8N6D2 247 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 FLVCR1-AS1Q8TAF5 88 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 SLC25A28Q96A46 364 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 RPUSD1Q9UJJ7 312 aaKnown RBP10.64□□□□□ -0.71
LDB3-205ENST00000429277 ANKRD36A6QL64 1941 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 CRYGSP22914 178 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 PAX8Q06710 450 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms