RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 NEGR1Q7Z3B1 354 aa12.06□□□□□ -0.48
SYNGAP1-203ENST00000428982 CSN1S1P47710 185 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 RPL8P62917 257 aaKnown RBP12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 PRDM14Q9GZV8 571 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 DECR2Q9NUI1 292 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 CEP192Q8TEP8 1941 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 GAGE13Q4V321 117 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 RNF144BQ7Z419 303 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 C12orf49Q9H741 205 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 OR2W1Q9Y3N9 320 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 C5orf49A4QMS7 147 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 IGHV3-9P01782 118 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 MAGEA5P43359 124 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 RSPO4Q2I0M5 234 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 OR4X2Q8NGF9 303 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 DAZAP1Q96EP5 407 aaKnown RBP12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 RAB9BQ9NP90 201 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 SYNGR3O43761 229 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 ARL14EPLP0DKL9 152 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 MZT1Q08AG7 82 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 ATP1A1-AS1Q5TC04 95 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 ZNF114Q8NC26 417 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 OR8A1Q8NGG7 326 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 RDH5Q92781 318 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 ENY2Q9NPA8 101 aa12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 CHCHD2Q9Y6H1 151 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-203ENST00000428982 CCL2P13500 99 aa12.04□□□□□ -0.48
SYNGAP1-203ENST00000428982 ZNF818PQ6ZRF7 136 aa12.04□□□□□ -0.48
SYNGAP1-203ENST00000428982 C18orf32Q8TCD1 76 aa12.04□□□□□ -0.48
SYNGAP1-203ENST00000428982 TP73-AS1Q9UF72 201 aa12.04□□□□□ -0.48
SYNGAP1-203ENST00000428982 ATP23Q9Y6H3 246 aa12.04□□□□□ -0.48
SYNGAP1-203ENST00000428982 CX3CL1P78423 397 aa12.04□□□□□ -0.48
SYNGAP1-203ENST00000428982 EBLN2Q6P2I7 272 aa12.04□□□□□ -0.48
SYNGAP1-203ENST00000428982 PRSS33Q8NF86 280 aa12.04□□□□□ -0.48
SYNGAP1-203ENST00000428982 PPP1R35Q8TAP8 253 aa12.04□□□□□ -0.48
SYNGAP1-203ENST00000428982 C3orf80F5H4A9 247 aa12.04□□□□□ -0.48
SYNGAP1-203ENST00000428982 FOXA3P55318 350 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-203ENST00000428982 KIAA2026Q5HYC2 2103 aa12.04□□□□□ -0.48
SYNGAP1-203ENST00000428982 Q8N976 141 aa12.04□□□□□ -0.48
SYNGAP1-203ENST00000428982 NRN1LQ496H8 165 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 ASCL4Q6XD76 172 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 hCG_38984A0A1B0GV85 526 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 BCL3P20749 454 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 NBL1P41271 181 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 ERVK-16P61578 105 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 TUSC5Q8IXB3 177 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 TTTY12Q9BZ98 90 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 SPTA1P02549 2419 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 F8W1H4 67 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 PTGDSP41222 190 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 RNPS1Q15287 305 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 CENPWQ5EE01 88 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 RNFT1Q5M7Z0 435 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 ZBTB34Q8NCN2 500 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 PRSS3P2Q8NHM4 247 aa12.03□□□□□ -0.48
SYNGAP1-203ENST00000428982 PRRG2O14669 202 aa12.02□□□□□ -0.48
SYNGAP1-203ENST00000428982 SYNGR1O43759 233 aa12.02□□□□□ -0.48
SYNGAP1-203ENST00000428982 CRYGCP07315 174 aa12.02□□□□□ -0.48
SYNGAP1-203ENST00000428982 SYT8Q8NBV8 401 aa12.02□□□□□ -0.48
SYNGAP1-203ENST00000428982 OR10X1Q8NGY0 326 aa12.02□□□□□ -0.48
SYNGAP1-203ENST00000428982 RNASE7Q9H1E1 156 aaKnown RBP12.02□□□□□ -0.48
SYNGAP1-203ENST00000428982 CRYGSP22914 178 aa12.02□□□□□ -0.48
SYNGAP1-203ENST00000428982 LINC00310P59036 64 aa12.02□□□□□ -0.48
SYNGAP1-203ENST00000428982 SRSF6Q13247 344 aaKnown RBP12.02□□□□□ -0.48
SYNGAP1-203ENST00000428982 TBC1D28Q2M2D7 210 aa12.02□□□□□ -0.48
SYNGAP1-203ENST00000428982 NEUROG1Q92886 237 aa12.02□□□□□ -0.48
SYNGAP1-203ENST00000428982 ADAMTS9Q9P2N4 1935 aa12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 FOXI3A8MTJ6 420 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 FAM90A26D6RGX4 464 aa12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 IGLV3-1P01715 115 aa12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 DEFA4P12838 97 aa12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 ATP5G2Q06055 141 aa12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 FAM169BQ8N8A8 192 aa12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 NABP1Q96AH0 204 aa12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 ACACAQ13085 2346 aa12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 LRRC30A6NM36 301 aa12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 UCNP55089 124 aa12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 TAAR6Q96RI8 345 aa12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 SSBP3Q9BWW4 388 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 NPCDR1Q9BY65 106 aa12.02□□□□□ -0.49
SYNGAP1-203ENST00000428982 GAGE12JA6NER3 117 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 SNCGO76070 127 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 GAGE7O76087 117 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 PATE4P0C8F1 98 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 GAGE12FP0CL80 117 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 GAGE12GP0CL81 117 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 GAGE12IP0CL82 117 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 GAGE4Q13068 117 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 TMEM116Q8NCL8 245 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 SVILO95425 2214 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 IZUMO1RA6ND01 250 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 TBR1Q16650 682 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 NMSQ5H8A3 153 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 Q6ZS49 121 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 C8orf86Q6ZUL3 223 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 SSC4DQ8WTU2 575 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 RNF138Q8WVD3 245 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 GRAMD2BQ96HH9 432 aa12.01□□□□□ -0.49
SYNGAP1-203ENST00000428982 FAM110AQ9BQ89 295 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms