RNA–Protein interactions for RNA: ENST00000428956.6

C4A-243, Transcript of complement C4A (Rodgers blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4A, Length 5,460 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-243ENST00000428956 DCTN5Q9BTE1 182 aa13.17□□□□□ -0.3
C4A-243ENST00000428956 IGKV1D-8A0A087WSZ0 117 aa13.17□□□□□ -0.3
C4A-243ENST00000428956 SUPT4H1P63272 117 aaKnown RBP13.17□□□□□ -0.3
C4A-243ENST00000428956 ZNF600Q6ZNG1 722 aa13.17□□□□□ -0.3
C4A-243ENST00000428956 ATP5L2Q7Z4Y8 100 aa13.17□□□□□ -0.3
C4A-243ENST00000428956 C17orf82Q86X59 251 aaPredicted RBP13.17□□□□□ -0.3
C4A-243ENST00000428956 ZIC4Q8N9L1 334 aa13.17□□□□□ -0.3
C4A-243ENST00000428956 TNFRSF14Q92956 283 aa13.17□□□□□ -0.3
C4A-243ENST00000428956 NABP1Q96AH0 204 aa13.17□□□□□ -0.3
C4A-243ENST00000428956 SLC50A1Q9BRV3 221 aa13.17□□□□□ -0.3
C4A-243ENST00000428956 TMEM160Q9NX00 188 aa13.17□□□□□ -0.3
C4A-243ENST00000428956 EPDR1Q9UM22 224 aa13.17□□□□□ -0.3
C4A-243ENST00000428956 MOB4Q9Y3A3 225 aa13.17□□□□□ -0.3
C4A-243ENST00000428956 PPP1R27Q86WC6 154 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 ASCL2Q99929 193 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 TRGV3P03979 118 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 ADMP35318 185 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 NIT1Q86X76 327 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 C14orf144Q96I85 54 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 REG4Q9BYZ8 158 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 VCX2Q9H322 139 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 LAMTOR2Q9Y2Q5 125 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 ZNF257Q9Y2Q1 563 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 C1QTNF9P0C862 333 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 C9orf106Q8NAJ2 232 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 TDRD6O60522 2096 aaKnown RBP13.16□□□□□ -0.3
C4A-243ENST00000428956 TRBV6-6A0A0A6YYG2 114 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 IGKV1D-33P01593 117 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 IGKV1-33P01594 117 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 CSRP1P21291 193 aaKnown RBP13.16□□□□□ -0.3
C4A-243ENST00000428956 KLK15Q9H2R5 256 aa13.16□□□□□ -0.3
C4A-243ENST00000428956 GBF1Q92538 1859 aa13.15□□□□□ -0.3
C4A-243ENST00000428956 PPBPP02775 128 aa13.15□□□□□ -0.3
C4A-243ENST00000428956 CELA3BP08861 270 aa13.15□□□□□ -0.3
C4A-243ENST00000428956 BSPH1Q075Z2 132 aa13.15□□□□□ -0.3
C4A-243ENST00000428956 TEX38Q6PEX7 206 aa13.15□□□□□ -0.3
C4A-243ENST00000428956 GREB1Q4ZG55 1949 aa13.15□□□□□ -0.3
C4A-243ENST00000428956 DUX5Q96PT3 197 aa13.15□□□□□ -0.3
C4A-243ENST00000428956 IGKV1-12A0A0C4DH73 117 aa13.15□□□□□ -0.3
C4A-243ENST00000428956 IGKV1D-12P01611 117 aa13.15□□□□□ -0.3
C4A-243ENST00000428956 CFPP27918 469 aa13.15□□□□□ -0.3
C4A-243ENST00000428956 EFNB3Q15768 340 aa13.15□□□□□ -0.3
C4A-243ENST00000428956 FOXL1Q12952 345 aa13.15□□□□□ -0.3
C4A-243ENST00000428956 CHCHD1Q96BP2 118 aaKnown RBP13.15□□□□□ -0.3
C4A-243ENST00000428956 SCGB3A1Q96QR1 104 aa13.15□□□□□ -0.3
C4A-243ENST00000428956 SIP14410 1827 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 TRAV9-2A0A087WT02 112 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 CEACAM4O75871 244 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 LYL1P12980 280 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 PCP4P48539 62 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 FABP5P3A8MUU1 101 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 NPFFO15130 113 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 NBR2O15453 112 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 NAPSAO96009 420 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 GPR183P32249 361 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 LINC01559Q495D7 138 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 TTC32Q5I0X7 151 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 Q6ZS49 121 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 TRAV8-6A0A0B4J262 113 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 RAMP3O60896 148 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 STAG3L3P0CL85 134 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 ATP5J2P56134 94 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 FAM201AQ5SY85 155 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 OR4X2Q8NGF9 303 aa13.14□□□□□ -0.31
C4A-243ENST00000428956 TMEM133Q9H2Q1 129 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 NTN3O00634 580 aaPredicted RBP13.13□□□□□ -0.31
C4A-243ENST00000428956 EFNA2O43921 213 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 NMSQ5H8A3 153 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 RASL11AQ6T310 242 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 TMEM105Q8N8V8 129 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 OCC1Q8TAD7 63 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 CACNA1IQ9P0X4 2223 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 C9JCJ5 164 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 MEIG1Q5JSS6 88 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 ALKBH7Q9BT30 221 aaPredicted RBP13.13□□□□□ -0.31
C4A-243ENST00000428956 RNASE7Q9H1E1 156 aaKnown RBP13.13□□□□□ -0.31
C4A-243ENST00000428956 DEPPQ9NTK1 212 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 SEMA5BQ9P283 1151 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 TRPM7Q96QT4 1865 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.13□□□□□ -0.31
C4A-243ENST00000428956 FAM74A4Q5TZK3 123 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 HIST3H2BBQ8N257 126 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 HIST1H2BLQ99880 126 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 AGMATQ9BSE5 352 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 LY96Q9Y6Y9 160 aa13.13□□□□□ -0.31
C4A-243ENST00000428956 TSKUQ8WUA8 353 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 FOXC2Q99958 501 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 OR9G9P0C7N8 305 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 GATA2P23769 480 aaPredicted RBP13.12□□□□□ -0.31
C4A-243ENST00000428956 TMEM42Q69YG0 159 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 C5orf30Q96GV9 206 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 CLDN16Q9Y5I7 305 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 CD55P08174 381 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 FAM19A2Q8N3H0 131 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 MRPL16Q9NX20 251 aaKnown RBP13.12□□□□□ -0.31
C4A-243ENST00000428956 LINC01549A6NIU2 74 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 QRFPP83859 136 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 LY6EQ16553 131 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 TMEM170BQ5T4T1 132 aa13.12□□□□□ -0.31
C4A-243ENST00000428956 LINC01560Q8TB33 94 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms