RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 RRNAD1Q96FB5 475 aaKnown RBP11.38□□□□□ -0.59
PHF1-204ENST00000427826 MISP3Q96FF7 219 aa11.38□□□□□ -0.59
PHF1-204ENST00000427826 TP53RKQ96S44 253 aa11.38□□□□□ -0.59
PHF1-204ENST00000427826 PDCD10Q9BUL8 212 aa11.38□□□□□ -0.59
PHF1-204ENST00000427826 EDA2RQ9HAV5 297 aa11.38□□□□□ -0.59
PHF1-204ENST00000427826 RBMY1BA6NDE4 496 aaKnown RBP11.37□□□□□ -0.59
PHF1-204ENST00000427826 RBMY1EA6NEQ0 496 aaKnown RBP11.37□□□□□ -0.59
PHF1-204ENST00000427826 C15orf62A8K5M9 175 aa11.37□□□□□ -0.59
PHF1-204ENST00000427826 I3L2K1 104 aa11.37□□□□□ -0.59
PHF1-204ENST00000427826 IGKV1-5P01602 117 aa11.37□□□□□ -0.59
PHF1-204ENST00000427826 CTSGP08311 255 aa11.37□□□□□ -0.59
PHF1-204ENST00000427826 RBMY1DP0C7P1 496 aaKnown RBP11.37□□□□□ -0.59
PHF1-204ENST00000427826 AKAIN1P0CW23 69 aa11.37□□□□□ -0.59
PHF1-204ENST00000427826 SNCAP37840 140 aa11.37□□□□□ -0.59
PHF1-204ENST00000427826 SUB1P53999 127 aaKnown RBP eCLIP11.37□□□□□ -0.59
PHF1-204ENST00000427826 SURF2Q15527 256 aaPredicted RBP11.37□□□□□ -0.59
PHF1-204ENST00000427826 MARCH1Q8TCQ1 289 aa11.37□□□□□ -0.59
PHF1-204ENST00000427826 SPAG8Q99932 426 aaPredicted RBP11.37□□□□□ -0.59
PHF1-204ENST00000427826 C20orf24Q9BUV8 137 aa11.37□□□□□ -0.59
PHF1-204ENST00000427826 HIPK2Q9H2X6 1198 aa11.37□□□□□ -0.59
PHF1-204ENST00000427826 NDUFA13Q9P0J0 144 aa11.37□□□□□ -0.59
PHF1-204ENST00000427826 C14orf166Q9Y224 244 aaKnown RBP11.37□□□□□ -0.59
PHF1-204ENST00000427826 A0A0B4J293 547 aa11.36□□□□□ -0.59
PHF1-204ENST00000427826 F8W735 103 aaPredicted RBP11.36□□□□□ -0.59
PHF1-204ENST00000427826 INS-IGF2F8WCM5 200 aa11.36□□□□□ -0.59
PHF1-204ENST00000427826 TSPAN4O14817 238 aa11.36□□□□□ -0.59
PHF1-204ENST00000427826 GSTZ1O43708 216 aaPredicted RBP11.36□□□□□ -0.59
PHF1-204ENST00000427826 IFNA17P01571 189 aa11.36□□□□□ -0.59
PHF1-204ENST00000427826 P0C879 139 aa11.36□□□□□ -0.59
PHF1-204ENST00000427826 UCP1P25874 307 aa11.36□□□□□ -0.59
PHF1-204ENST00000427826 ADMP35318 185 aa11.36□□□□□ -0.59
PHF1-204ENST00000427826 SLC35G3Q8N808 338 aa11.36□□□□□ -0.59
PHF1-204ENST00000427826 RNASE11Q8TAA1 199 aaKnown RBP11.36□□□□□ -0.59
PHF1-204ENST00000427826 WFDC10AQ9H1F0 79 aa11.36□□□□□ -0.59
PHF1-204ENST00000427826 SELENOKQ9Y6D0 94 aa11.36□□□□□ -0.59
PHF1-204ENST00000427826 ST8SIA3O43173 380 aa11.35□□□□□ -0.59
PHF1-204ENST00000427826 MT-CO2P00403 227 aa11.35□□□□□ -0.59
PHF1-204ENST00000427826 NPBWR1P48145 328 aa11.35□□□□□ -0.59
PHF1-204ENST00000427826 IZUMO4Q1ZYL8 232 aa11.35□□□□□ -0.59
PHF1-204ENST00000427826 SP6Q3SY56 376 aa11.35□□□□□ -0.59
PHF1-204ENST00000427826 FAM219AQ8IW50 185 aa11.35□□□□□ -0.59
PHF1-204ENST00000427826 PINX1Q96BK5 328 aaKnown RBP11.35□□□□□ -0.59
PHF1-204ENST00000427826 PRRT1Q99946 306 aa11.35□□□□□ -0.59
PHF1-204ENST00000427826 TMEM222Q9H0R3 208 aa11.35□□□□□ -0.59
PHF1-204ENST00000427826 ENY2Q9NPA8 101 aa11.35□□□□□ -0.59
PHF1-204ENST00000427826 LOC102724200A0A096LPH7 203 aaPredicted RBP11.34□□□□□ -0.59
PHF1-204ENST00000427826 TEX13DA0A0J9YY54 714 aaPredicted RBP11.34□□□□□ -0.59
PHF1-204ENST00000427826 CORTO00230 105 aa11.34□□□□□ -0.59
PHF1-204ENST00000427826 GNG7O60262 68 aa11.34□□□□□ -0.59
PHF1-204ENST00000427826 YIF1AO95070 293 aa11.34□□□□□ -0.59
PHF1-204ENST00000427826 CDS2O95674 445 aa11.34□□□□□ -0.59
PHF1-204ENST00000427826 DHODHQ02127 395 aa11.34□□□□□ -0.59
PHF1-204ENST00000427826 PYDC2Q56P42 97 aa11.34□□□□□ -0.59
PHF1-204ENST00000427826 DUSP18Q8NEJ0 188 aa11.34□□□□□ -0.59
PHF1-204ENST00000427826 IL17DQ8TAD2 202 aa11.34□□□□□ -0.59
PHF1-204ENST00000427826 SOSTQ9BQB4 213 aa11.34□□□□□ -0.59
PHF1-204ENST00000427826 GGTLC1Q9BX51 225 aa11.34□□□□□ -0.59
PHF1-204ENST00000427826 ANKRD20A5PA0PJZ0 165 aa11.33□□□□□ -0.6
PHF1-204ENST00000427826 OR4C46A6NHA9 309 aa11.33□□□□□ -0.6
PHF1-204ENST00000427826 HOXA1P49639 335 aaPredicted RBP11.33□□□□□ -0.6
PHF1-204ENST00000427826 SPINK9Q5DT21 86 aa11.33□□□□□ -0.6
PHF1-204ENST00000427826 SPANXN2Q5MJ10 180 aa11.33□□□□□ -0.6
PHF1-204ENST00000427826 FAAP20Q6NZ36 180 aa11.33□□□□□ -0.6
PHF1-204ENST00000427826 OR4C16Q8NGL9 310 aa11.33□□□□□ -0.6
PHF1-204ENST00000427826 OR10C1Q96KK4 312 aa11.33□□□□□ -0.6
PHF1-204ENST00000427826 SCGB3A2Q96PL1 93 aa11.33□□□□□ -0.6
PHF1-204ENST00000427826 RTBDNQ9BSG5 229 aaPredicted RBP11.33□□□□□ -0.6
PHF1-204ENST00000427826 NAA60Q9H7X0 242 aa11.33□□□□□ -0.6
PHF1-204ENST00000427826 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.33□□□□□ -0.6
PHF1-204ENST00000427826 CACFD1Q9UGQ2 172 aa11.33□□□□□ -0.6
PHF1-204ENST00000427826 SMPXQ9UHP9 88 aa11.33□□□□□ -0.6
PHF1-204ENST00000427826 SCP2D1Q9UJQ7 156 aa11.33□□□□□ -0.6
PHF1-204ENST00000427826 IGHV3OR16-8A0A075B7F1 116 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 TRAV14DV4A0A0A6YYC5 116 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 IGHV7-4-1A0A0J9YVY3 117 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 ZNF207O43670 478 aaKnown RBP11.32□□□□□ -0.6
PHF1-204ENST00000427826 CD5P06127 495 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 OR5AC1P0C628 307 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 BMI1P35226 326 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 FAUP35544 74 aaKnown RBP11.32□□□□□ -0.6
PHF1-204ENST00000427826 ETV6P41212 452 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 AP3S2P59780 193 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 SPCS3P61009 180 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 PVRIGQ6DKI7 326 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 TMEM116Q8NCL8 245 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 OR52E5Q8NH55 327 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 GLYATL2Q8WU03 294 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 RBPMSQ93062 196 aaKnown RBP11.32□□□□□ -0.6
PHF1-204ENST00000427826 FAM110AQ9BQ89 295 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 GINS3Q9BRX5 216 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 RETNQ9HD89 108 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 MCUBQ9NWR8 336 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 GPR132Q9UNW8 380 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 V9GYH0 126 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 RYR3Q15413 4870 aa11.32□□□□□ -0.6
PHF1-204ENST00000427826 CRYM-AS1A6NIL9 109 aa11.31□□□□□ -0.6
PHF1-204ENST00000427826 SCGB2A1O75556 95 aa11.31□□□□□ -0.6
PHF1-204ENST00000427826 IGHV3-48P01763 117 aa11.31□□□□□ -0.6
PHF1-204ENST00000427826 CMC4P56277 68 aaPredicted RBP11.31□□□□□ -0.6
PHF1-204ENST00000427826 AARDQ4LEZ3 155 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms