RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 OR9G9P0C7N8 305 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 MESP2Q0VG99 397 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 LRRC75A-AS1Q8N1F1 130 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 ZNF257Q9Y2Q1 563 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 KNTC1P50748 2209 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 A0A1W2PR77 199 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 UPK2O00526 184 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 HLA-DQA1P01909 254 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 PPBPP02775 128 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 VSIG8P0DPA2 414 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 PLA2G5P39877 138 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 DMKNQ6E0U4 476 aaPredicted RBP4.81□□□□□ -1.64
HERC4-206ENST00000427635 TMEM126AQ9H061 195 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 C15orf61A6NNL5 157 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 CDC42EP2O14613 210 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 LEPROTL1O95214 131 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 PEX11BO96011 259 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 ZNF708P17019 499 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 RPL39P5Q59GN2 51 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 FAM216BQ8N7L0 139 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 NKAPP1Q8N9T2 125 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 NABP2Q9BQ15 211 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 SLC25A2Q9BXI2 301 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 IFI27L2Q9H2X8 130 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 KLK5Q9Y337 293 aaPredicted RBP4.81□□□□□ -1.64
HERC4-206ENST00000427635 CSDC2Q9Y534 153 aaKnown RBP4.81□□□□□ -1.64
HERC4-206ENST00000427635 TRIP11Q15643 1979 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 NDUFB4O95168 129 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 IGKV1D-16P01601 117 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 FGF9P31371 208 aaPredicted RBP4.81□□□□□ -1.64
HERC4-206ENST00000427635 OR11H1Q8NG94 326 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 OR11H2Q8NH07 326 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 SPANXB1Q9NS25 103 aaPredicted RBP4.81□□□□□ -1.64
HERC4-206ENST00000427635 F11RQ9Y624 299 aaKnown RBP4.81□□□□□ -1.64
HERC4-206ENST00000427635 TAF1P21675 1872 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 ARAP2Q8WZ64 1704 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 IQCF6A8MYZ5 107 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 C1QTNF9BB2RNN3 333 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 LINC01619G3V211 115 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 AMBPP02760 352 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 ZNF672Q499Z4 452 aaPredicted RBP4.81□□□□□ -1.64
HERC4-206ENST00000427635 ACTL10Q5JWF8 245 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 MORN3Q6PF18 240 aaPredicted RBP4.81□□□□□ -1.64
HERC4-206ENST00000427635 TMEM52Q8NDY8 209 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 OR5A1Q8NGJ0 315 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 IL17DQ8TAD2 202 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 TNFRSF12AQ9NP84 129 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 ANAPC10Q9UM13 185 aa4.81□□□□□ -1.64
HERC4-206ENST00000427635 TRBV7-1A0A0A6YYK4 115 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 TEX48A0A1B0GUV7 120 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 A0A1W2PP11 408 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 LMO1P25800 156 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 TIMP3P35625 211 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 CA7P43166 264 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 FER1L6-AS1Q8NA97 138 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 OR10S1Q8NGN2 331 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 USMG5Q96IX5 58 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 MUC6Q6W4X9 2439 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 FAM223BA6NKX1 122 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 H3BUX3 64 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 IGHV3-48P01763 117 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 IGHV2-70P01814 119 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 HBBP68871 147 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 PSG3Q16557 428 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 FAM223AQ8IWN6 122 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 AURKAIP1Q9NWT8 199 aaPredicted RBP4.8□□□□□ -1.64
HERC4-206ENST00000427635 TNRC6CQ9HCJ0 1690 aaKnown RBP4.8□□□□□ -1.64
HERC4-206ENST00000427635 GGTLC3B5MD39 225 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 J3QLI3 93 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 IGHMP01871 453 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 CD59P13987 128 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 ERCC8Q13216 396 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 DUX4L9Q6RFH8 374 aaPredicted RBP4.8□□□□□ -1.64
HERC4-206ENST00000427635 TMEM222Q9H0R3 208 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 IGHV3-53P01767 116 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 SPRED2Q7Z698 418 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 ZAR1Q86SH2 424 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 TMEM219Q86XT9 240 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 NRGNQ92686 78 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 GPR146Q96CH1 333 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 RREB1Q92766 1687 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 FOLR2P14207 255 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 FAM201AQ5SY85 155 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 CYB561D1Q8N8Q1 229 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 C20orf173Q96LM9 149 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.8□□□□□ -1.64
HERC4-206ENST00000427635 TRPM3Q9HCF6 1732 aaPredicted RBP4.8□□□□□ -1.64
HERC4-206ENST00000427635 GVINP1Q7Z2Y8 2422 aa4.8□□□□□ -1.64
HERC4-206ENST00000427635 A0A1B0GTI1 187 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 OOSP1A8MZH6 123 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 M0R1W7 72 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 CTSBP07858 339 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 ATP6V0CP27449 155 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 FXYD7P58549 80 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 RBMY1FQ15415 496 aaKnown RBP4.79□□□□□ -1.64
HERC4-206ENST00000427635 AQP3Q92482 292 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 MEGF9Q9H1U4 602 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 OTORQ9NRC9 128 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 TIAF1O95411 115 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 TMEM50AO95807 157 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms