RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 FOXA3P55318 350 aaPredicted RBP12.22□□□□□ -0.45
PTPN13-203ENST00000427191 FUT5Q11128 374 aa12.22□□□□□ -0.45
PTPN13-203ENST00000427191 CGAP01215 116 aa12.22□□□□□ -0.45
PTPN13-203ENST00000427191 LINC01587Q99440 93 aa12.22□□□□□ -0.45
PTPN13-203ENST00000427191 FBXL7Q9UJT9 491 aa12.22□□□□□ -0.45
PTPN13-203ENST00000427191 DTX4Q9Y2E6 619 aa12.22□□□□□ -0.45
PTPN13-203ENST00000427191 SSC4DQ8WTU2 575 aa12.22□□□□□ -0.45
PTPN13-203ENST00000427191 PILRAQ9UKJ1 303 aa12.22□□□□□ -0.45
PTPN13-203ENST00000427191 RNASE4P34096 147 aaKnown RBP12.21□□□□□ -0.45
PTPN13-203ENST00000427191 IFITM3Q01628 133 aa12.21□□□□□ -0.45
PTPN13-203ENST00000427191 SEPSECSQ9HD40 501 aaKnown RBP12.21□□□□□ -0.45
PTPN13-203ENST00000427191 SPINT1O43278 529 aa12.21□□□□□ -0.45
PTPN13-203ENST00000427191 RFLNBQ8N5W9 214 aa12.21□□□□□ -0.45
PTPN13-203ENST00000427191 GTF3AQ92664 365 aaKnown RBP12.21□□□□□ -0.45
PTPN13-203ENST00000427191 PILRBQ9UKJ0 227 aa12.21□□□□□ -0.45
PTPN13-203ENST00000427191 LINC00614P0C842 121 aa12.21□□□□□ -0.45
PTPN13-203ENST00000427191 IGHV4-39P01824 125 aa12.21□□□□□ -0.45
PTPN13-203ENST00000427191 TMEM144Q7Z5S9 345 aa12.21□□□□□ -0.46
PTPN13-203ENST00000427191 PPP1R27Q86WC6 154 aa12.21□□□□□ -0.46
PTPN13-203ENST00000427191 CHTOPQ9Y3Y2 248 aaKnown RBP12.21□□□□□ -0.46
PTPN13-203ENST00000427191 A0A1W2PRE2 83 aa12.2□□□□□ -0.46
PTPN13-203ENST00000427191 SAMD5Q5TGI4 173 aa12.2□□□□□ -0.46
PTPN13-203ENST00000427191 ZNF826PQ6ZT77 177 aa12.2□□□□□ -0.46
PTPN13-203ENST00000427191 NHP2Q9NX24 153 aaKnown RBP12.2□□□□□ -0.46
PTPN13-203ENST00000427191 ERG28Q9UKR5 140 aa12.2□□□□□ -0.46
PTPN13-203ENST00000427191 DOCK6Q96HP0 2047 aa12.2□□□□□ -0.46
PTPN13-203ENST00000427191 SCO2A0A1W2PP80 73 aa12.2□□□□□ -0.46
PTPN13-203ENST00000427191 SPINK2P20155 84 aa12.2□□□□□ -0.46
PTPN13-203ENST00000427191 SPAARA0A1B0GVQ0 90 aa12.2□□□□□ -0.46
PTPN13-203ENST00000427191 UPK2O00526 184 aa12.2□□□□□ -0.46
PTPN13-203ENST00000427191 ITLN2Q8WWU7 325 aaPredicted RBP12.19□□□□□ -0.46
PTPN13-203ENST00000427191 RPP25Q9BUL9 199 aaKnown RBP12.19□□□□□ -0.46
PTPN13-203ENST00000427191 FOXA2Q9Y261 457 aaPredicted RBP12.19□□□□□ -0.46
PTPN13-203ENST00000427191 HS3ST3B1Q9Y662 390 aa12.19□□□□□ -0.46
PTPN13-203ENST00000427191 LAGE3Q14657 143 aa12.19□□□□□ -0.46
PTPN13-203ENST00000427191 SLC25A48Q6ZT89 311 aaKnown RBP12.19□□□□□ -0.46
PTPN13-203ENST00000427191 MEGF9Q9H1U4 602 aa12.19□□□□□ -0.46
PTPN13-203ENST00000427191 COL24A1Q17RW2 1714 aa12.19□□□□□ -0.46
PTPN13-203ENST00000427191 PLEKHB2Q96CS7 222 aa12.19□□□□□ -0.46
PTPN13-203ENST00000427191 ZNF479Q96JC4 524 aa12.19□□□□□ -0.46
PTPN13-203ENST00000427191 F8WEM9 126 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 UBR3Q6ZT12 1888 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 THADAQ6YHU6 1953 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 UBE2CO00762 179 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 SERF1AO75920 110 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 SNRPCP09234 159 aaKnown RBP12.18□□□□□ -0.46
PTPN13-203ENST00000427191 ABHD17AQ96GS6 310 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 FHL5Q5TD97 284 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 STPG1Q5TH74 334 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 CST9LQ9H4G1 147 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 CADP27708 2225 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 NTN1O95631 604 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 TOMM40O96008 361 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 VKORC1Q9BQB6 163 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 OVOL1O14753 267 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 C1QL4Q86Z23 238 aa12.18□□□□□ -0.46
PTPN13-203ENST00000427191 COL18A1P39060 1754 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 C15orf61A6NNL5 157 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 IGFBP2P18065 325 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 SSBP2P81877 361 aaPredicted RBP12.17□□□□□ -0.46
PTPN13-203ENST00000427191 STHQ8IWL8 128 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 MRPL20Q9BYC9 149 aaKnown RBP12.17□□□□□ -0.46
PTPN13-203ENST00000427191 DOCK4Q8N1I0 1966 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 CD28P10747 220 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 CD7P09564 240 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 GTSCR1Q86UQ5 136 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 NR2C2APQ86WQ0 139 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 DLX4Q92988 240 aaPredicted RBP12.17□□□□□ -0.46
PTPN13-203ENST00000427191 TRIOBPQ9H2D6 2365 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 CD160O95971 181 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 WNK2Q9Y3S1 2297 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 SPTBN2O15020 2390 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 A0A1W2PRS3 328 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 NBR2O15453 112 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 LY6EQ16553 131 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 TMEM249Q2WGJ8 235 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 TNFRSF14Q92956 283 aa12.17□□□□□ -0.46
PTPN13-203ENST00000427191 MRPS18CQ9Y3D5 142 aaKnown RBP12.17□□□□□ -0.46
PTPN13-203ENST00000427191 COX6A1P12074 109 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 IFITM2Q01629 132 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 PEAR1Q5VY43 1037 aaPredicted RBP12.16□□□□□ -0.46
PTPN13-203ENST00000427191 JPT2Q9H910 190 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 TCRBV4S1A1TA0A5B7 111 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 YPEL1O60688 119 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 IGKV1D-33P01593 117 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 IGKV1-33P01594 117 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 TSKUQ8WUA8 353 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 YPEL2Q96QA6 119 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 EFEMP2O95967 443 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 SHANK3Q9BYB0 1731 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 TRAV12-3A0A0B4J271 114 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 HAX1O00165 279 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 LDLRAD2Q5SZI1 272 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 TMEM52Q8NDY8 209 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 CTHRC1Q96CG8 243 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 EGR4Q05215 589 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 SRSF7Q16629 238 aaKnown RBP eCLIP12.16□□□□□ -0.46
PTPN13-203ENST00000427191 TDGF1P3P51864 188 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 IGKV1-8A0A0C4DH67 115 aa12.16□□□□□ -0.46
PTPN13-203ENST00000427191 C1QTNF5Q9BXJ0 243 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms