RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 ZNF616Q08AN1 781 aa12.78□□□□□ -0.36
AFF3-208ENST00000427118 ARL16Q0P5N6 197 aa12.78□□□□□ -0.36
AFF3-208ENST00000427118 HAPLN4Q86UW8 402 aa12.78□□□□□ -0.36
AFF3-208ENST00000427118 ZNF709Q8N972 641 aa12.78□□□□□ -0.36
AFF3-208ENST00000427118 TEX45Q8NA69 505 aa12.78□□□□□ -0.36
AFF3-208ENST00000427118 OR1L8Q8NGR8 309 aa12.78□□□□□ -0.36
AFF3-208ENST00000427118 LINC01006Q8NI28 216 aa12.78□□□□□ -0.36
AFF3-208ENST00000427118 LYPD6BQ8NI32 183 aa12.78□□□□□ -0.36
AFF3-208ENST00000427118 PIFOQ8TCI5 191 aa12.78□□□□□ -0.36
AFF3-208ENST00000427118 WDR61Q9GZS3 305 aaKnown RBP12.78□□□□□ -0.36
AFF3-208ENST00000427118 SH3BGRL3Q9H299 93 aa12.78□□□□□ -0.36
AFF3-208ENST00000427118 CLPSL1A2RUU4 121 aa12.77□□□□□ -0.37
AFF3-208ENST00000427118 SRRM4A7MD48 611 aaKnown RBP12.77□□□□□ -0.37
AFF3-208ENST00000427118 C15orf62A8K5M9 175 aa12.77□□□□□ -0.37
AFF3-208ENST00000427118 PMS2P5A8MQ11 134 aa12.77□□□□□ -0.37
AFF3-208ENST00000427118 MPDU1O75352 247 aa12.77□□□□□ -0.37
AFF3-208ENST00000427118 MBP02144 154 aa12.77□□□□□ -0.37
AFF3-208ENST00000427118 DLK1P80370 383 aa12.77□□□□□ -0.37
AFF3-208ENST00000427118 VWC2Q2TAL6 325 aa12.77□□□□□ -0.37
AFF3-208ENST00000427118 ETV3LQ6ZN32 361 aa12.77□□□□□ -0.37
AFF3-208ENST00000427118 MOB3BQ86TA1 216 aa12.77□□□□□ -0.37
AFF3-208ENST00000427118 FAM213BQ8TBF2 198 aa12.77□□□□□ -0.37
AFF3-208ENST00000427118 PITPNC1Q9UKF7 332 aa12.77□□□□□ -0.37
AFF3-208ENST00000427118 FBXO7Q9Y3I1 522 aa12.77□□□□□ -0.37
AFF3-208ENST00000427118 VWFP04275 2813 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 IGHV1-3A0A0C4DH29 117 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 INS-IGF2F8WCM5 200 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 IFNA4P05014 189 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 NPY1RP25929 384 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 MAS1LP35410 378 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 ERHP84090 104 aaKnown RBP12.76□□□□□ -0.37
AFF3-208ENST00000427118 SPINK9Q5DT21 86 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 CENPVQ7Z7K6 275 aaPredicted RBP12.76□□□□□ -0.37
AFF3-208ENST00000427118 CCDC28AQ8IWP9 274 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 SLC24A4Q8NFF2 622 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 SGMS2Q8NHU3 365 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 PBDC1Q9BVG4 233 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 KCNIP2Q9NS61 270 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 PLA2G2EQ9NZK7 142 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 RNF114Q9Y508 228 aa12.76□□□□□ -0.37
AFF3-208ENST00000427118 TEX50A0A1B0GTY4 177 aa12.75□□□□□ -0.37
AFF3-208ENST00000427118 UBE2L5PA0A1B0GUS4 154 aa12.75□□□□□ -0.37
AFF3-208ENST00000427118 FNDC10F2Z333 226 aa12.75□□□□□ -0.37
AFF3-208ENST00000427118 CD1BP29016 333 aa12.75□□□□□ -0.37
AFF3-208ENST00000427118 PROK1P58294 105 aa12.75□□□□□ -0.37
AFF3-208ENST00000427118 DIAPH2-AS1Q14236 149 aa12.75□□□□□ -0.37
AFF3-208ENST00000427118 MMD2Q8IY49 270 aa12.75□□□□□ -0.37
AFF3-208ENST00000427118 HINT2Q9BX68 163 aa12.75□□□□□ -0.37
AFF3-208ENST00000427118 SIGLEC9Q9Y336 463 aa12.75□□□□□ -0.37
AFF3-208ENST00000427118 A0A1B0GUS0 222 aa12.74□□□□□ -0.37
AFF3-208ENST00000427118 A0A1W2PPI3 338 aa12.74□□□□□ -0.37
AFF3-208ENST00000427118 TSPAN9O75954 239 aa12.74□□□□□ -0.37
AFF3-208ENST00000427118 H2AFB1P0C5Y9 115 aa12.74□□□□□ -0.37
AFF3-208ENST00000427118 FGF7P21781 194 aa12.74□□□□□ -0.37
AFF3-208ENST00000427118 SNCAP37840 140 aa12.74□□□□□ -0.37
AFF3-208ENST00000427118 SUB1P53999 127 aaKnown RBP eCLIP12.74□□□□□ -0.37
AFF3-208ENST00000427118 RUNX1Q01196 453 aa12.74□□□□□ -0.37
AFF3-208ENST00000427118 PEA15Q15121 130 aa12.74□□□□□ -0.37
AFF3-208ENST00000427118 SMDT1Q9H4I9 107 aa12.74□□□□□ -0.37
AFF3-208ENST00000427118 TREM1Q9NP99 234 aa12.74□□□□□ -0.37
AFF3-208ENST00000427118 A6NDX4 124 aa12.73□□□□□ -0.37
AFF3-208ENST00000427118 TIMM23O14925 209 aa12.73□□□□□ -0.37
AFF3-208ENST00000427118 ACTL6BO94805 426 aa12.73□□□□□ -0.37
AFF3-208ENST00000427118 IGLV2-23P01705 113 aa12.73□□□□□ -0.37
AFF3-208ENST00000427118 FAM106CPP0CH98 169 aa12.73□□□□□ -0.37
AFF3-208ENST00000427118 RAB31Q13636 194 aa12.73□□□□□ -0.37
AFF3-208ENST00000427118 C2orf83Q53S99 150 aa12.73□□□□□ -0.37
AFF3-208ENST00000427118 TMEM41BQ5BJD5 291 aa12.73□□□□□ -0.37
AFF3-208ENST00000427118 PRR31Q5SQ13 230 aa12.73□□□□□ -0.37
AFF3-208ENST00000427118 HIST2H2BDQ6DRA6 164 aa12.73□□□□□ -0.37
AFF3-208ENST00000427118 NARS2Q96I59 477 aaKnown RBP12.73□□□□□ -0.37
AFF3-208ENST00000427118 CITED1Q99966 193 aa12.73□□□□□ -0.37
AFF3-208ENST00000427118 C16orf95Q9H693 158 aa12.73□□□□□ -0.37
AFF3-208ENST00000427118 NDUFA4L2Q9NRX3 87 aa12.73□□□□□ -0.37
AFF3-208ENST00000427118 TRAV1-1A0A0B4J248 108 aa12.72□□□□□ -0.37
AFF3-208ENST00000427118 A0A1B0GW64 132 aa12.72□□□□□ -0.37
AFF3-208ENST00000427118 HABP2Q14520 560 aaPredicted RBP12.72□□□□□ -0.37
AFF3-208ENST00000427118 TMEM219Q86XT9 240 aa12.72□□□□□ -0.37
AFF3-208ENST00000427118 BPIFCQ8NFQ6 507 aa12.72□□□□□ -0.37
AFF3-208ENST00000427118 CFHR4Q92496 578 aa12.72□□□□□ -0.37
AFF3-208ENST00000427118 RBMXL1Q96E39 390 aaKnown RBP12.72□□□□□ -0.37
AFF3-208ENST00000427118 RSG1Q9BU20 258 aa12.72□□□□□ -0.37
AFF3-208ENST00000427118 NPVFQ9HCQ7 196 aa12.72□□□□□ -0.37
AFF3-208ENST00000427118 WDR83OSQ9Y284 106 aa12.72□□□□□ -0.37
AFF3-208ENST00000427118 TMEM218A2RU14 115 aa12.71□□□□□ -0.37
AFF3-208ENST00000427118 RRHO14718 337 aa12.71□□□□□ -0.37
AFF3-208ENST00000427118 SLC25A17O43808 307 aa12.71□□□□□ -0.37
AFF3-208ENST00000427118 CA2P00918 260 aa12.71□□□□□ -0.37
AFF3-208ENST00000427118 CD24P25063 80 aa12.71□□□□□ -0.37
AFF3-208ENST00000427118 C16orf82Q7Z2V1 217 aa12.71□□□□□ -0.37
AFF3-208ENST00000427118 LINC00052Q96N35 136 aa12.71□□□□□ -0.37
AFF3-208ENST00000427118 ZNF430Q9H8G1 570 aaPredicted RBP12.71□□□□□ -0.37
AFF3-208ENST00000427118 SMCO3A2RU48 225 aa12.7□□□□□ -0.38
AFF3-208ENST00000427118 SNRNP70P08621 437 aaKnown RBP12.7□□□□□ -0.38
AFF3-208ENST00000427118 PSG5Q15238 335 aa12.7□□□□□ -0.38
AFF3-208ENST00000427118 PRSS8Q16651 343 aa12.7□□□□□ -0.38
AFF3-208ENST00000427118 ACOT6Q3I5F7 207 aaPredicted RBP12.7□□□□□ -0.38
AFF3-208ENST00000427118 FBLN7Q53RD9 439 aa12.7□□□□□ -0.38
AFF3-208ENST00000427118 RBM14Q96PK6 669 aaKnown RBP12.7□□□□□ -0.38
AFF3-208ENST00000427118 NPCDR1Q9BY65 106 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms