RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 DHODHQ02127 395 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 BTNL8Q6UX41 500 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 LINC00322Q6ZN03 302 aaPredicted RBP8.09□□□□□ -1.11
LINC01238-202ENST00000426962 RBPMS2Q6ZRY4 209 aaKnown RBP8.09□□□□□ -1.11
LINC01238-202ENST00000426962 SLC16A13Q7RTY0 426 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 TMEM61Q8N0U2 210 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 DEFB125Q8N687 156 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 OR51S1Q8NGJ8 323 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 GLYATL2Q8WU03 294 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 TMEM190Q8WZ59 177 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 SPATA25Q9BR10 227 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 PDCD10Q9BUL8 212 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 TMEM222Q9H0R3 208 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 C5orf66Q9H5L9 145 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 DAZ1Q9NQZ3 744 aaKnown RBP8.09□□□□□ -1.11
LINC01238-202ENST00000426962 SCP2D1Q9UJQ7 156 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 SELENOKQ9Y6D0 94 aa8.09□□□□□ -1.11
LINC01238-202ENST00000426962 NUPL2O15504 423 aaKnown RBP8.08□□□□□ -1.12
LINC01238-202ENST00000426962 SCAF4O95104 1147 aaKnown RBP8.08□□□□□ -1.12
LINC01238-202ENST00000426962 MT-CO2P00403 227 aa8.08□□□□□ -1.12
LINC01238-202ENST00000426962 OR5AC1P0C628 307 aa8.08□□□□□ -1.12
LINC01238-202ENST00000426962 ADMP35318 185 aa8.08□□□□□ -1.12
LINC01238-202ENST00000426962 ETV6P41212 452 aa8.08□□□□□ -1.12
LINC01238-202ENST00000426962 SUB1P53999 127 aaKnown RBP eCLIP8.08□□□□□ -1.12
LINC01238-202ENST00000426962 RELQ04864 619 aaPredicted RBP8.08□□□□□ -1.12
LINC01238-202ENST00000426962 SPINK9Q5DT21 86 aa8.08□□□□□ -1.12
LINC01238-202ENST00000426962 FAM219AQ8IW50 185 aa8.08□□□□□ -1.12
LINC01238-202ENST00000426962 SLC35G3Q8N808 338 aa8.08□□□□□ -1.12
LINC01238-202ENST00000426962 OR52B4Q8NGK2 314 aa8.08□□□□□ -1.12
LINC01238-202ENST00000426962 RNASE11Q8TAA1 199 aaKnown RBP8.08□□□□□ -1.12
LINC01238-202ENST00000426962 SCGB3A2Q96PL1 93 aa8.08□□□□□ -1.12
LINC01238-202ENST00000426962 CITED4Q96RK1 184 aa8.08□□□□□ -1.12
LINC01238-202ENST00000426962 C20orf24Q9BUV8 137 aa8.08□□□□□ -1.12
LINC01238-202ENST00000426962 NAA60Q9H7X0 242 aa8.08□□□□□ -1.12
LINC01238-202ENST00000426962 KCNIP3Q9Y2W7 256 aa8.08□□□□□ -1.12
LINC01238-202ENST00000426962 A0A0G2JRQ6 117 aa8.07□□□□□ -1.12
LINC01238-202ENST00000426962 RBMY1BA6NDE4 496 aaKnown RBP8.07□□□□□ -1.12
LINC01238-202ENST00000426962 RBMY1EA6NEQ0 496 aaKnown RBP8.07□□□□□ -1.12
LINC01238-202ENST00000426962 CCDC160A6NGH7 325 aa8.07□□□□□ -1.12
LINC01238-202ENST00000426962 CRYM-AS1A6NIL9 109 aa8.07□□□□□ -1.12
LINC01238-202ENST00000426962 C15orf62A8K5M9 175 aa8.07□□□□□ -1.12
LINC01238-202ENST00000426962 RBMY1DP0C7P1 496 aaKnown RBP8.07□□□□□ -1.12
LINC01238-202ENST00000426962 LAMTOR1Q6IAA8 161 aa8.07□□□□□ -1.12
LINC01238-202ENST00000426962 Q6ZRM9 215 aa8.07□□□□□ -1.12
LINC01238-202ENST00000426962 SELENOHQ8IZQ5 122 aaKnown RBP8.07□□□□□ -1.12
LINC01238-202ENST00000426962 DUSP18Q8NEJ0 188 aa8.07□□□□□ -1.12
LINC01238-202ENST00000426962 OR52E5Q8NH55 327 aa8.07□□□□□ -1.12
LINC01238-202ENST00000426962 MUC7Q8TAX7 377 aa8.07□□□□□ -1.12
LINC01238-202ENST00000426962 RBPMSQ93062 196 aaKnown RBP8.07□□□□□ -1.12
LINC01238-202ENST00000426962 PINX1Q96BK5 328 aaKnown RBP8.07□□□□□ -1.12
LINC01238-202ENST00000426962 SRD5A3Q9H8P0 318 aa8.07□□□□□ -1.12
LINC01238-202ENST00000426962 ENY2Q9NPA8 101 aa8.07□□□□□ -1.12
LINC01238-202ENST00000426962 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.07□□□□□ -1.12
LINC01238-202ENST00000426962 CORTO00230 105 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 TSPAN4O14817 238 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 GNG7O60262 68 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 IGHV3-48P01763 117 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 NPBWR1P48145 328 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 HOXA1P49639 335 aaPredicted RBP8.06□□□□□ -1.12
LINC01238-202ENST00000426962 SPCS3P61009 180 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 AARDQ4LEZ3 155 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 PVRIGQ6DKI7 326 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 LHFPL5Q8TAF8 219 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 GALNT14Q96FL9 552 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 OR10C1Q96KK4 312 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 SPAG8Q99932 426 aaPredicted RBP8.06□□□□□ -1.12
LINC01238-202ENST00000426962 WFDC10AQ9H1F0 79 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 MCUBQ9NWR8 336 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 TMEM56-RWDD3S4R434 201 aa8.06□□□□□ -1.12
LINC01238-202ENST00000426962 IGHV3OR16-8A0A075B7F1 116 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 TRAV14DV4A0A0A6YYC5 116 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 ZNF207O43670 478 aaKnown RBP8.05□□□□□ -1.12
LINC01238-202ENST00000426962 YIF1AO95070 293 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 TMEM50AO95807 157 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 RNASE2P10153 161 aaKnown RBP8.05□□□□□ -1.12
LINC01238-202ENST00000426962 S100A5P33763 92 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 FAUP35544 74 aaKnown RBP8.05□□□□□ -1.12
LINC01238-202ENST00000426962 AP3S2P59780 193 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 PYDC2Q56P42 97 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 TMEM268Q5VZI3 342 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 IL22RA2Q969J5 263 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 GPR146Q96CH1 333 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 ZNF414Q96IQ9 312 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 HIPK2Q9H2X6 1198 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 CACFD1Q9UGQ2 172 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 SMPXQ9UHP9 88 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 DNAH7Q8WXX0 4024 aa8.05□□□□□ -1.12
LINC01238-202ENST00000426962 IGHV7-4-1A0A0J9YVY3 117 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 ZNF701M0R085 212 aaPredicted RBP8.04□□□□□ -1.12
LINC01238-202ENST00000426962 CHEK1O14757 476 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 LYL1P12980 280 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 AKR1C4P17516 323 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 HTR2BP41595 481 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 TMEM187Q14656 261 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 BSXQ3C1V8 233 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 CASC10Q5T4H9 136 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 TOMM5Q8N4H5 51 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 TMEM116Q8NCL8 245 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 TMEM230Q96A57 120 aa8.04□□□□□ -1.12
LINC01238-202ENST00000426962 RHPN1-AS1Q9BWJ2 59 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms