RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 TPRX1Q8N7U7 411 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 MCRIP2Q9BUT9 160 aaKnown RBP13.28□□□□□ -0.28
PKP4-205ENST00000426248 A0A087X0K7 114 aa13.27□□□□□ -0.28
PKP4-205ENST00000426248 hDV102S1A0JD36 115 aa13.27□□□□□ -0.28
PKP4-205ENST00000426248 YPEL1O60688 119 aa13.27□□□□□ -0.28
PKP4-205ENST00000426248 CTXN2P0C2S0 81 aa13.27□□□□□ -0.28
PKP4-205ENST00000426248 TIMP3P35625 211 aa13.27□□□□□ -0.28
PKP4-205ENST00000426248 GNG4P50150 75 aa13.27□□□□□ -0.28
PKP4-205ENST00000426248 C19orf35Q6ZS72 473 aa13.27□□□□□ -0.28
PKP4-205ENST00000426248 ODF3L1Q8IXM7 274 aa13.27□□□□□ -0.28
PKP4-205ENST00000426248 OR8B3Q8NGG8 313 aa13.27□□□□□ -0.28
PKP4-205ENST00000426248 OR1B1Q8NGR6 318 aa13.27□□□□□ -0.28
PKP4-205ENST00000426248 LRRC29Q8WV35 223 aa13.27□□□□□ -0.28
PKP4-205ENST00000426248 YPEL2Q96QA6 119 aa13.27□□□□□ -0.28
PKP4-205ENST00000426248 IGHV2-26A0A0B4J1V2 119 aa13.27□□□□□ -0.29
PKP4-205ENST00000426248 H0Y980 276 aa13.27□□□□□ -0.29
PKP4-205ENST00000426248 H1FXQ92522 213 aaKnown RBP13.27□□□□□ -0.29
PKP4-205ENST00000426248 PPP1R35Q8TAP8 253 aa13.27□□□□□ -0.29
PKP4-205ENST00000426248 SSMEM1Q8WWF3 244 aa13.27□□□□□ -0.29
PKP4-205ENST00000426248 DKK4Q9UBT3 224 aa13.27□□□□□ -0.29
PKP4-205ENST00000426248 H3BUT2 72 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 BMPR1BO00238 502 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 ARL14EPLP0DKL9 152 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 PAX2Q02962 417 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 LRRC10Q5BKY1 277 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 MOGAT3Q86VF5 341 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 PNKDQ8N490 385 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 CCL17Q92583 94 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 C7orf71A4D174 169 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 RHBDL1O75783 438 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 CCL1P22362 96 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 NPPCP23582 126 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 RPL31P62899 125 aaKnown RBP13.26□□□□□ -0.29
PKP4-205ENST00000426248 TNFAIP6P98066 277 aaPredicted RBP13.26□□□□□ -0.29
PKP4-205ENST00000426248 PLGLAQ15195 96 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 HEYLQ9NQ87 328 aaPredicted RBP13.26□□□□□ -0.29
PKP4-205ENST00000426248 FER1L6-AS1Q8NA97 138 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 TPPP3Q9BW30 176 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 PKD1L2Q7Z442 2459 aa13.26□□□□□ -0.29
PKP4-205ENST00000426248 KMT2EQ8IZD2 1858 aa13.25□□□□□ -0.29
PKP4-205ENST00000426248 MMP23AO75900 390 aa13.25□□□□□ -0.29
PKP4-205ENST00000426248 WNT2P09544 360 aa13.25□□□□□ -0.29
PKP4-205ENST00000426248 NPY1RP25929 384 aa13.25□□□□□ -0.29
PKP4-205ENST00000426248 NHLRC2Q8NBF2 726 aa13.25□□□□□ -0.29
PKP4-205ENST00000426248 J3QT63 122 aa13.25□□□□□ -0.29
PKP4-205ENST00000426248 GPR6P46095 362 aaPredicted RBP13.25□□□□□ -0.29
PKP4-205ENST00000426248 SSBP3Q9BWW4 388 aaPredicted RBP13.25□□□□□ -0.29
PKP4-205ENST00000426248 RNASE7Q9H1E1 156 aaKnown RBP13.25□□□□□ -0.29
PKP4-205ENST00000426248 CXXC4Q9H2H0 198 aa13.25□□□□□ -0.29
PKP4-205ENST00000426248 HILPDAQ9Y5L2 63 aa13.25□□□□□ -0.29
PKP4-205ENST00000426248 CD3EP07766 207 aa13.25□□□□□ -0.29
PKP4-205ENST00000426248 YPEL3P61236 119 aaPredicted RBP13.25□□□□□ -0.29
PKP4-205ENST00000426248 C1orf162Q8NEQ5 155 aaPredicted RBP13.25□□□□□ -0.29
PKP4-205ENST00000426248 WFDC12Q8WWY7 111 aa13.25□□□□□ -0.29
PKP4-205ENST00000426248 IL36RNQ9UBH0 155 aa13.25□□□□□ -0.29
PKP4-205ENST00000426248 IGHV1-18A0A0C4DH31 117 aa13.24□□□□□ -0.29
PKP4-205ENST00000426248 G6PCP35575 357 aa13.24□□□□□ -0.29
PKP4-205ENST00000426248 ZNF835Q9Y2P0 537 aa13.24□□□□□ -0.29
PKP4-205ENST00000426248 PIGBOS1A0A0B4J2F0 54 aa13.24□□□□□ -0.29
PKP4-205ENST00000426248 APELAP0DMC3 54 aa13.24□□□□□ -0.29
PKP4-205ENST00000426248 CEBPDP49716 269 aaPredicted RBP13.24□□□□□ -0.29
PKP4-205ENST00000426248 ZCCHC24Q8N2G6 241 aaKnown RBP13.24□□□□□ -0.29
PKP4-205ENST00000426248 MFAP2P55001 183 aa13.24□□□□□ -0.29
PKP4-205ENST00000426248 RBM11P57052 281 aaKnown RBP13.24□□□□□ -0.29
PKP4-205ENST00000426248 SCCPDHQ8NBX0 429 aa13.24□□□□□ -0.29
PKP4-205ENST00000426248 BOD1L1Q8NFC6 3051 aa13.24□□□□□ -0.29
PKP4-205ENST00000426248 NCKAP5O14513 1909 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 IGHV3OR15-7A0A075B7D8 119 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 CA1P00915 261 aaPredicted RBP13.23□□□□□ -0.29
PKP4-205ENST00000426248 PQLC2Q6ZP29 291 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 NPCDR1Q9BY65 106 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 KCNIP2Q9NS61 270 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 THYN1Q9P016 225 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 OR1A1Q9P1Q5 309 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 EXPH5Q8NEV8 1989 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 IGKV1-27A0A075B6S5 117 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 ZNF207O43670 478 aaKnown RBP13.23□□□□□ -0.29
PKP4-205ENST00000426248 CD40P25942 277 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 TMEM144Q7Z5S9 345 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 WDR31Q8NA23 367 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 TSKUQ8WUA8 353 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 OR2V2Q96R30 315 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 DSPP15924 2871 aaKnown RBP13.23□□□□□ -0.29
PKP4-205ENST00000426248 CTRLP40313 264 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 LINC00310P59036 64 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 TNXAQ16473 311 aa13.23□□□□□ -0.29
PKP4-205ENST00000426248 TRAV8-6A0A0B4J262 113 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 IGKV1-12A0A0C4DH73 117 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 LRRC30A6NM36 301 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 IGKV1D-12P01611 117 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 MT-ND6P03923 174 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 HTR1DP28221 377 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 BPIFA4PQ86YQ2 179 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 Q8NA96 180 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 LIN7CQ9NUP9 197 aaKnown RBP13.22□□□□□ -0.29
PKP4-205ENST00000426248 TAX1BP3O14907 124 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 ZG16O60844 167 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 CSN3P07498 182 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 ESDP10768 282 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 BSPH1Q075Z2 132 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms