RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 MRPL41Q8IXM3 137 aaKnown RBP12.47□□□□□ -0.41
SHOX2-202ENST00000425436 SLC24A4Q8NFF2 622 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 OR1L8Q8NGR8 309 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 TMEM167AQ8TBQ9 72 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 PIFOQ8TCI5 191 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 MBD3L1Q8WWY6 194 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 RSG1Q9BU20 258 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 COMMD5Q9GZQ3 224 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 EIF5A2Q9GZV4 153 aaKnown RBP12.47□□□□□ -0.41
SHOX2-202ENST00000425436 KCNIP2Q9NS61 270 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 C2CD3Q4AC94 2353 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 A0A1W2PN81 502 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 IFNA4P05014 189 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 FGF7P21781 194 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 NPY1RP25929 384 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 CHRNA7P36544 502 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 RPL8P62917 257 aaKnown RBP12.47□□□□□ -0.41
SHOX2-202ENST00000425436 LY6EQ16553 131 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 SFT2D1Q8WV19 159 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 SSMEM1Q8WWF3 244 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 WDR83OSQ9Y284 106 aa12.47□□□□□ -0.41
SHOX2-202ENST00000425436 TEX50A0A1B0GTY4 177 aa12.46□□□□□ -0.42
SHOX2-202ENST00000425436 SNAPINO95295 136 aa12.46□□□□□ -0.42
SHOX2-202ENST00000425436 ERHP84090 104 aaKnown RBP12.46□□□□□ -0.42
SHOX2-202ENST00000425436 SRSF3P84103 164 aaKnown RBP12.46□□□□□ -0.42
SHOX2-202ENST00000425436 AKR1C1Q04828 323 aa12.46□□□□□ -0.42
SHOX2-202ENST00000425436 PMS2P11Q13670 270 aa12.46□□□□□ -0.42
SHOX2-202ENST00000425436 MOB3BQ86TA1 216 aa12.46□□□□□ -0.42
SHOX2-202ENST00000425436 TEX45Q8NA69 505 aa12.46□□□□□ -0.42
SHOX2-202ENST00000425436 JMJD8Q96S16 334 aa12.46□□□□□ -0.42
SHOX2-202ENST00000425436 NPVFQ9HCQ7 196 aa12.46□□□□□ -0.42
SHOX2-202ENST00000425436 RPRMQ9NS64 109 aa12.46□□□□□ -0.42
SHOX2-202ENST00000425436 FBN1P35555 2871 aaKnown RBP12.45□□□□□ -0.42
SHOX2-202ENST00000425436 A0A1W2PPI3 338 aa12.45□□□□□ -0.42
SHOX2-202ENST00000425436 RBFOX3A6NFN3 312 aa12.45□□□□□ -0.42
SHOX2-202ENST00000425436 RAB31Q13636 194 aa12.45□□□□□ -0.42
SHOX2-202ENST00000425436 SPSB3Q6PJ21 355 aa12.45□□□□□ -0.42
SHOX2-202ENST00000425436 NPCDR1Q9BY65 106 aa12.45□□□□□ -0.42
SHOX2-202ENST00000425436 IGHV3-72A0A0B4J1Y9 119 aa12.44□□□□□ -0.42
SHOX2-202ENST00000425436 IGHV1-3A0A0C4DH29 117 aa12.44□□□□□ -0.42
SHOX2-202ENST00000425436 RRHO14718 337 aa12.44□□□□□ -0.42
SHOX2-202ENST00000425436 TIMM23O14925 209 aa12.44□□□□□ -0.42
SHOX2-202ENST00000425436 SFTA3P0C7M3 94 aa12.44□□□□□ -0.42
SHOX2-202ENST00000425436 MAS1LP35410 378 aa12.44□□□□□ -0.42
SHOX2-202ENST00000425436 TAGLN2P37802 199 aaKnown RBP12.44□□□□□ -0.42
SHOX2-202ENST00000425436 ACOT6Q3I5F7 207 aaPredicted RBP12.44□□□□□ -0.42
SHOX2-202ENST00000425436 FBLN7Q53RD9 439 aa12.44□□□□□ -0.42
SHOX2-202ENST00000425436 C2orf83Q53S99 150 aa12.44□□□□□ -0.42
SHOX2-202ENST00000425436 CCDC144NLQ6NUI1 221 aa12.44□□□□□ -0.42
SHOX2-202ENST00000425436 SLC35B3Q9H1N7 401 aa12.44□□□□□ -0.42
SHOX2-202ENST00000425436 TMEM231Q9H6L2 316 aa12.44□□□□□ -0.42
SHOX2-202ENST00000425436 NDUFA4L2Q9NRX3 87 aa12.44□□□□□ -0.42
SHOX2-202ENST00000425436 SLC39A9Q9NUM3 307 aa12.44□□□□□ -0.42
SHOX2-202ENST00000425436 OOSP1A8MZH6 123 aa12.43□□□□□ -0.42
SHOX2-202ENST00000425436 PRSS46E5RG02 174 aa12.43□□□□□ -0.42
SHOX2-202ENST00000425436 CYB5BO43169 146 aa12.43□□□□□ -0.42
SHOX2-202ENST00000425436 BRS3P32247 399 aa12.43□□□□□ -0.42
SHOX2-202ENST00000425436 SUB1P53999 127 aaKnown RBP eCLIP12.43□□□□□ -0.42
SHOX2-202ENST00000425436 RIPPLY3P57055 190 aa12.43□□□□□ -0.42
SHOX2-202ENST00000425436 TMEM219Q86XT9 240 aa12.43□□□□□ -0.42
SHOX2-202ENST00000425436 SCRT1Q9BWW7 348 aa12.43□□□□□ -0.42
SHOX2-202ENST00000425436 HINT2Q9BX68 163 aa12.43□□□□□ -0.42
SHOX2-202ENST00000425436 ACTR3CQ9C0K3 210 aaPredicted RBP12.43□□□□□ -0.42
SHOX2-202ENST00000425436 RFNGQ9Y644 331 aa12.43□□□□□ -0.42
SHOX2-202ENST00000425436 CLDN34H7C241 214 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 CA2P00918 260 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 IFNA1P01562 189 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 IGLV2-23P01705 113 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 OPRK1P41145 380 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 KHDC3LQ587J8 217 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 TMEM86BQ8N661 226 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 OR5R1Q8NH85 324 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 CFHR4Q92496 578 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 NKX6-2Q9C056 277 aaPredicted RBP12.42□□□□□ -0.42
SHOX2-202ENST00000425436 VPREB3Q9UKI3 123 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 ATRQ13535 2644 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 FAM181BA6NEQ2 426 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 TSPAN9O75954 239 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 HSPB1P04792 205 aaKnown RBP12.42□□□□□ -0.42
SHOX2-202ENST00000425436 RNASE1P07998 156 aaKnown RBP12.42□□□□□ -0.42
SHOX2-202ENST00000425436 ADCYAP1P18509 176 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 HNF4GQ14541 408 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 BSXQ3C1V8 233 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 ZNF506Q5JVG8 444 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 FFAR4Q5NUL3 377 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 MMD2Q8IY49 270 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 OR10G4Q8NGN3 311 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 OR10G9Q8NGN4 311 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 OR10G7Q8NGN6 311 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 SUN5Q8TC36 379 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 CACNG8Q8WXS5 425 aa12.42□□□□□ -0.42
SHOX2-202ENST00000425436 RCC1LQ96I51 464 aaKnown RBP12.42□□□□□ -0.42
SHOX2-202ENST00000425436 CTXND1A0A1B0GTU2 59 aa12.41□□□□□ -0.42
SHOX2-202ENST00000425436 SMCO3A2RU48 225 aa12.41□□□□□ -0.42
SHOX2-202ENST00000425436 A6NDX4 124 aa12.41□□□□□ -0.42
SHOX2-202ENST00000425436 NDUFS6O75380 124 aaKnown RBP12.41□□□□□ -0.42
SHOX2-202ENST00000425436 SCO1O75880 301 aa12.41□□□□□ -0.42
SHOX2-202ENST00000425436 IGKV1D-33P01593 117 aa12.41□□□□□ -0.42
SHOX2-202ENST00000425436 IGKV1-33P01594 117 aa12.41□□□□□ -0.42
SHOX2-202ENST00000425436 SNRNP70P08621 437 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms