RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 Q9H521 79 aa8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 FAM212BQ9NTI7 297 aaPredicted RBP8.99□□□□□ -0.97
HLA-DQB3-203ENST00000425319 IGHV3OR16-13A0A075B7E8 117 aa8.98□□□□□ -0.97
HLA-DQB3-203ENST00000425319 IGHV3-74A0A0B4J1X5 117 aa8.98□□□□□ -0.97
HLA-DQB3-203ENST00000425319 MT-CO2P00403 227 aa8.98□□□□□ -0.97
HLA-DQB3-203ENST00000425319 PTHLHP12272 177 aa8.98□□□□□ -0.97
HLA-DQB3-203ENST00000425319 SDC2P34741 201 aa8.98□□□□□ -0.97
HLA-DQB3-203ENST00000425319 AP2S1P53680 142 aaPredicted RBP8.98□□□□□ -0.97
HLA-DQB3-203ENST00000425319 UBE2UQ5VVX9 321 aa8.98□□□□□ -0.97
HLA-DQB3-203ENST00000425319 PVRIGQ6DKI7 326 aa8.98□□□□□ -0.97
HLA-DQB3-203ENST00000425319 FCAMRQ8WWV6 532 aa8.98□□□□□ -0.97
HLA-DQB3-203ENST00000425319 C1QTNF4Q9BXJ3 329 aa8.98□□□□□ -0.97
HLA-DQB3-203ENST00000425319 MS4A6AQ9H2W1 248 aa8.98□□□□□ -0.97
HLA-DQB3-203ENST00000425319 ENY2Q9NPA8 101 aa8.98□□□□□ -0.97
HLA-DQB3-203ENST00000425319 APLNQ9ULZ1 77 aa8.98□□□□□ -0.97
HLA-DQB3-203ENST00000425319 SMIM31A0A1B0GVY4 71 aa8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 IFNA21P01568 189 aa8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 IFNA17P01571 189 aa8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 HLA-DMBP28068 263 aa8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 RFX2P48378 723 aa8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 HSPE1P61604 102 aaKnown RBP8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 ZNF124Q15973 351 aa8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 KCTD21Q4G0X4 260 aa8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 FAM90A2PQ658T7 463 aa8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 LEMD1Q68G75 181 aa8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 METTL26Q96S19 204 aa8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 RNF126Q9BV68 326 aa8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 YTHDF1Q9BYJ9 559 aaKnown RBP8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 TMEM14BQ9NUH8 114 aa8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 RAB26Q9ULW5 256 aa8.97□□□□□ -0.97
HLA-DQB3-203ENST00000425319 IGHV4-4A0A075B6R2 117 aa8.96□□□□□ -0.98
HLA-DQB3-203ENST00000425319 I3L2K1 104 aa8.96□□□□□ -0.98
HLA-DQB3-203ENST00000425319 PMP2P02689 132 aa8.96□□□□□ -0.98
HLA-DQB3-203ENST00000425319 SOHLH1Q5JUK2 328 aa8.96□□□□□ -0.98
HLA-DQB3-203ENST00000425319 TOMM20LQ6UXN7 152 aa8.96□□□□□ -0.98
HLA-DQB3-203ENST00000425319 IZUMO2Q6UXV1 221 aa8.96□□□□□ -0.98
HLA-DQB3-203ENST00000425319 STXBP6Q8NFX7 210 aa8.96□□□□□ -0.98
HLA-DQB3-203ENST00000425319 NDUFAF3Q9BU61 184 aa8.96□□□□□ -0.98
HLA-DQB3-203ENST00000425319 VSIRQ9H7M9 311 aa8.96□□□□□ -0.98
HLA-DQB3-203ENST00000425319 PUS1Q9Y606 427 aaKnown RBP eCLIP8.96□□□□□ -0.98
HLA-DQB3-203ENST00000425319 TRAV30A0A087WSZ9 112 aa8.95□□□□□ -0.98
HLA-DQB3-203ENST00000425319 LOC100506127A0A0U1RQW1 187 aa8.95□□□□□ -0.98
HLA-DQB3-203ENST00000425319 MEIS3P1A6NDR6 274 aa8.95□□□□□ -0.98
HLA-DQB3-203ENST00000425319 IFNA10P01566 189 aa8.95□□□□□ -0.98
HLA-DQB3-203ENST00000425319 MED14OSP0DP75 135 aa8.95□□□□□ -0.98
HLA-DQB3-203ENST00000425319 PRSS3P35030 304 aa8.95□□□□□ -0.98
HLA-DQB3-203ENST00000425319 PRCDQ00LT1 54 aa8.95□□□□□ -0.98
HLA-DQB3-203ENST00000425319 TMEM69Q5SWH9 247 aa8.95□□□□□ -0.98
HLA-DQB3-203ENST00000425319 SPARTQ8N0X7 666 aa8.95□□□□□ -0.98
HLA-DQB3-203ENST00000425319 SLC35G3Q8N808 338 aa8.95□□□□□ -0.98
HLA-DQB3-203ENST00000425319 ZNF114Q8NC26 417 aa8.95□□□□□ -0.98
HLA-DQB3-203ENST00000425319 PFDN2Q9UHV9 154 aa8.95□□□□□ -0.98
HLA-DQB3-203ENST00000425319 TBC1D24Q9ULP9 559 aa8.95□□□□□ -0.98
HLA-DQB3-203ENST00000425319 DEFB131BA0A096LNP1 70 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 IGHV4-28A0A0C4DH34 117 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 HELTA6NFD8 242 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 F8W735 103 aaPredicted RBP8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 TMEM50AO95807 157 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 PRR20EP86478 221 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 PRR20CP86479 221 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 PRR20DP86480 221 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 PRR20BP86481 221 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 PRR20AP86496 221 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 POM121L12Q8N7R1 296 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 OR5H6Q8NGV6 325 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 NRG4Q8WWG1 115 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 ST8SIA2Q92186 375 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 HYDINQ4G0P3 5121 aa8.94□□□□□ -0.98
HLA-DQB3-203ENST00000425319 IGHV3-66A0A0C4DH42 116 aa8.93□□□□□ -0.98
HLA-DQB3-203ENST00000425319 RPS10-NUDT3A0A1W2PQS6 291 aa8.93□□□□□ -0.98
HLA-DQB3-203ENST00000425319 PRSS29PA6NIE9 313 aa8.93□□□□□ -0.98
HLA-DQB3-203ENST00000425319 IGHV3-48P01763 117 aa8.93□□□□□ -0.98
HLA-DQB3-203ENST00000425319 SNRPD3P62318 126 aaKnown RBP8.93□□□□□ -0.98
HLA-DQB3-203ENST00000425319 PHLDA2Q53GA4 152 aa8.93□□□□□ -0.98
HLA-DQB3-203ENST00000425319 UBE2NLQ5JXB2 153 aa8.93□□□□□ -0.98
HLA-DQB3-203ENST00000425319 TBC1D26Q86UD7 250 aa8.93□□□□□ -0.98
HLA-DQB3-203ENST00000425319 UBE2DNLQ8IWF7 75 aa8.93□□□□□ -0.98
HLA-DQB3-203ENST00000425319 RNASE11Q8TAA1 199 aaKnown RBP8.93□□□□□ -0.98
HLA-DQB3-203ENST00000425319 Q8WTZ3 238 aa8.93□□□□□ -0.98
HLA-DQB3-203ENST00000425319 ZNF414Q96IQ9 312 aa8.93□□□□□ -0.98
HLA-DQB3-203ENST00000425319 TMEM189A5PLL7 270 aa8.92□□□□□ -0.98
HLA-DQB3-203ENST00000425319 OPRK1P41145 380 aa8.92□□□□□ -0.98
HLA-DQB3-203ENST00000425319 AKR1C2P52895 323 aa8.92□□□□□ -0.98
HLA-DQB3-203ENST00000425319 DHRS2Q13268 280 aa8.92□□□□□ -0.98
HLA-DQB3-203ENST00000425319 ACTL10Q5JWF8 245 aa8.92□□□□□ -0.98
HLA-DQB3-203ENST00000425319 Q6ZTC4 211 aa8.92□□□□□ -0.98
HLA-DQB3-203ENST00000425319 Q8NAQ8 132 aa8.92□□□□□ -0.98
HLA-DQB3-203ENST00000425319 SLC25A38Q96DW6 304 aa8.92□□□□□ -0.98
HLA-DQB3-203ENST00000425319 RRNAD1Q96FB5 475 aaKnown RBP8.92□□□□□ -0.98
HLA-DQB3-203ENST00000425319 TEX48A0A1B0GUV7 120 aa8.91□□□□□ -0.98
HLA-DQB3-203ENST00000425319 ZNF705EA8MWA4 302 aaPredicted RBP8.91□□□□□ -0.98
HLA-DQB3-203ENST00000425319 CLEC2LP0C7M8 214 aa8.91□□□□□ -0.98
HLA-DQB3-203ENST00000425319 ZNF688P0C7X2 276 aa8.91□□□□□ -0.98
HLA-DQB3-203ENST00000425319 RBMY1A1P0DJD3 496 aaKnown RBP8.91□□□□□ -0.98
HLA-DQB3-203ENST00000425319 RBMY1CP0DJD4 496 aa8.91□□□□□ -0.98
HLA-DQB3-203ENST00000425319 PGAM2P15259 253 aa8.91□□□□□ -0.98
HLA-DQB3-203ENST00000425319 HLA-DMAP28067 261 aa8.91□□□□□ -0.98
HLA-DQB3-203ENST00000425319 P2RY1P47900 373 aa8.91□□□□□ -0.98
HLA-DQB3-203ENST00000425319 HOXA1P49639 335 aaPredicted RBP8.91□□□□□ -0.98
HLA-DQB3-203ENST00000425319 UCP3P55916 312 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms