RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 DYSFO75923 2080 aa2.61□□□□□ -1.99
SF3B1-205ENST00000424674 DOCK5Q9H7D0 1870 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 IGHV3-43A0A0B4J1X8 118 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 H0YJW9 148 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 H3BMG7 143 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 LY6LH3BQJ8 138 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 C19orf84I3L1E1 186 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 K7ERS5 55 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 M0R378 163 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 CCL25O15444 150 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 OR2T1O43869 369 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 FABP2P12104 132 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 PTHLHP12272 177 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 HIST1H1BP16401 226 aaKnown RBP2.6□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF32P17041 273 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 PSMB8P28062 276 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 SRP14P37108 136 aaKnown RBP2.6□□□□□ -1.99
SF3B1-205ENST00000424674 CSN1S1P47710 185 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF136P52737 540 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 LYZP61626 148 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 BSPH1Q075Z2 132 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 LDLRAD2Q5SZI1 272 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 AADACL3Q5VUY0 350 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 AMTNQ6UX39 209 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 GTF2H5Q6ZYL4 71 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 SSX8Q7RTT4 187 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 TRAPPC6BQ86SZ2 158 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 TMEM256Q8N2U0 113 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 RPP25LQ8N5L8 163 aaKnown RBP2.6□□□□□ -1.99
SF3B1-205ENST00000424674 Q8N7P7 452 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 SLC25A46Q96AG3 418 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 OPRPNQ99935 248 aaPredicted RBP2.6□□□□□ -1.99
SF3B1-205ENST00000424674 TMEM133Q9H2Q1 129 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 XAGE1AQ9HD64 81 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 IL36BQ9NZH7 164 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 REREQ9P2R6 1566 aa2.6□□□□□ -1.99
SF3B1-205ENST00000424674 ARHGAP31Q2M1Z3 1444 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 TRAPPC8Q9Y2L5 1435 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 GRIN2AQ12879 1464 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 RAPGEF2Q9Y4G8 1499 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 IGHV3-21A0A0B4J1V1 117 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 TRAV13-1A0A0B4J241 112 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF860A6NHJ4 632 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 LEUTXA8MZ59 168 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF670-ZNF695F2Z2N8 137 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 UBFD1O14562 309 aaKnown RBP2.59□□□□□ -1.99
SF3B1-205ENST00000424674 NDUFB3O43676 98 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 PGLYRP1O75594 196 aaPredicted RBP2.59□□□□□ -1.99
SF3B1-205ENST00000424674 SNAPC5O75971 98 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 NDUFB2O95178 105 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 KRASP01116 189 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 INSP01308 110 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 IGKV1-5P01602 117 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 APCSP02743 223 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 INAFM2P0DMQ5 153 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 CRIP2P52943 208 aaPredicted RBP2.59□□□□□ -1.99
SF3B1-205ENST00000424674 RBM11P57052 281 aaKnown RBP2.59□□□□□ -1.99
SF3B1-205ENST00000424674 HIST1H4AP62805 103 aaKnown RBP2.59□□□□□ -1.99
SF3B1-205ENST00000424674 ZNF141Q15928 474 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 Q1RN00 199 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 SPANXN3Q5MJ09 141 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 COL5A1-AS1Q5SY13 56 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 NCMAPQ5T1S8 102 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 FAM104BQ5XKR9 115 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 PHF5AQ7RTV0 110 aaKnown RBP2.59□□□□□ -1.99
SF3B1-205ENST00000424674 DAND5Q8N907 189 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 SUMF2Q8NBJ7 301 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 KLHL30-AS1Q8NEE0 82 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 OR10AC1Q8NH08 325 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 DEDD2Q8WXF8 326 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 B9D2Q9BPU9 175 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 MRPL57Q9BQC6 102 aaKnown RBP2.59□□□□□ -1.99
SF3B1-205ENST00000424674 SHANK2-AS3Q9BTD1 123 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 ADAT1Q9BUB4 502 aaKnown RBP2.59□□□□□ -1.99
SF3B1-205ENST00000424674 DERL1Q9BUN8 251 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 SLC39A9Q9NUM3 307 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 MARCOQ9UEW3 520 aaPredicted RBP2.59□□□□□ -1.99
SF3B1-205ENST00000424674 SCP2D1Q9UJQ7 156 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 FUT9Q9Y231 359 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 MIA3Q5JRA6 1907 aa2.59□□□□□ -1.99
SF3B1-205ENST00000424674 ADGBQ8N7X0 1667 aa2.59□□□□□ -2
SF3B1-205ENST00000424674 SCN10AQ9Y5Y9 1956 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 A0A087X0T9 212 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 IGKV1D-43A0A0B4J1Z2 117 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 IGKV1-12A0A0C4DH73 117 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 LOC100130705A0A1B0GUX0 176 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 OR2T8A6NH00 312 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 A8MWP6 167 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 C1orf196B1AJZ1 125 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 CDC42EP2O14613 210 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 NAPSAO96009 420 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 SOD1P00441 154 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 IGKV1D-12P01611 117 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 C1QAP02745 245 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 FOXA3P55318 350 aaPredicted RBP2.58□□□□□ -2
SF3B1-205ENST00000424674 KRTAP10-12P60413 245 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 UBE2BP63146 152 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 BTG2P78543 158 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 QRFPP83859 136 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms