RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CT45A6P0DMU7 189 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 CT45A5P0DMU8 189 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 CT45A7P0DMV0 189 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 TBR1Q16650 682 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 FAM71F2Q6NXP2 309 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 ZNF833PQ6ZTB9 187 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 TMPRSS7Q7RTY8 843 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 THAP8Q8NA92 274 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 ZNRF1Q8ND25 227 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 STXBP6Q8NFX7 210 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 C18orf32Q8TCD1 76 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 SLC25A2Q9BXI2 301 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 SAP30LQ9HAJ7 183 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 NDUFA4L2Q9NRX3 87 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 FZR1Q9UM11 496 aa12.4□□□□□ -0.42
C9orf3-204ENST00000424143 TRAV17A0A0B4J275 112 aa12.39□□□□□ -0.43
C9orf3-204ENST00000424143 USF1P22415 310 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-204ENST00000424143 KLF3P57682 345 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-204ENST00000424143 ERHP84090 104 aaKnown RBP12.39□□□□□ -0.43
C9orf3-204ENST00000424143 TMEM177Q53S58 311 aa12.39□□□□□ -0.43
C9orf3-204ENST00000424143 PLA2G2CQ5R387 149 aa12.39□□□□□ -0.43
C9orf3-204ENST00000424143 TIMM23BQ5SRD1 257 aa12.39□□□□□ -0.43
C9orf3-204ENST00000424143 MOGAT3Q86VF5 341 aa12.39□□□□□ -0.43
C9orf3-204ENST00000424143 LYG1Q8N1E2 194 aa12.39□□□□□ -0.43
C9orf3-204ENST00000424143 LAMTOR2Q9Y2Q5 125 aa12.39□□□□□ -0.43
C9orf3-204ENST00000424143 TANC2Q9HCD6 1990 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 CHRNB4P30926 498 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 MYCNOSP40205 109 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 MSMPQ1L6U9 139 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 CT83Q5H943 113 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 ZNF788Q6ZQV5 615 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 SPACA3Q8IXA5 215 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 C8orf31Q8N9H6 132 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 OR8B3Q8NGG8 313 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 RCHY1Q96PM5 261 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 OR8B2Q96RD0 313 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 ARRDC1-AS1Q9H2J1 176 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 KLF12Q9Y4X4 402 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 FAM186AA6NE01 2351 aa12.38□□□□□ -0.43
C9orf3-204ENST00000424143 IGHV3OR15-7A0A075B7D8 119 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 MBD3L4A6NDZ8 208 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-204ENST00000424143 MBD3L3A6NE82 208 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-204ENST00000424143 MBD3L5A6NJ08 208 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-204ENST00000424143 HIST1H1EP10412 219 aaKnown RBP12.37□□□□□ -0.43
C9orf3-204ENST00000424143 CA7P43166 264 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 HNRNPA3P51991 378 aaKnown RBP12.37□□□□□ -0.43
C9orf3-204ENST00000424143 MEF2CQ06413 473 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-204ENST00000424143 TEX36Q5VZQ5 186 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 PVRIGQ6DKI7 326 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 MBD3L2Q8NHZ7 208 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-204ENST00000424143 PLPPR2Q96GM1 343 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 FAM103A1Q9BTL3 118 aaKnown RBP12.37□□□□□ -0.43
C9orf3-204ENST00000424143 AMMECR1Q9Y4X0 333 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-204ENST00000424143 TRAV9-2A0A087WT02 112 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 IGHV2-26A0A0B4J1V2 119 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 A0A1B0GXF2 115 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 A6NNC1 897 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 SRRM4A7MD48 611 aaKnown RBP12.37□□□□□ -0.43
C9orf3-204ENST00000424143 PEX7O00628 323 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 TOMM40O96008 361 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 PMCHP20382 165 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 REG1BP48304 166 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 SUB1P53999 127 aaKnown RBP eCLIP12.37□□□□□ -0.43
C9orf3-204ENST00000424143 BPIFB3P59826 476 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 UBE2L3P68036 154 aaKnown RBP12.37□□□□□ -0.43
C9orf3-204ENST00000424143 FXYD3Q14802 87 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 ZNF329Q86UD4 541 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 OR2D3Q8NGH3 330 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 OR5AN1Q8NGI8 311 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 TMEM167AQ8TBQ9 72 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 GAFA1Q96PS6 74 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 C7orf69Q9H7B7 122 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 GCM1Q9NP62 436 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 LINC00312Q9Y6C7 94 aa12.37□□□□□ -0.43
C9orf3-204ENST00000424143 hADV38S2A0JD32 116 aa12.36□□□□□ -0.43
C9orf3-204ENST00000424143 APOA2P02652 100 aa12.36□□□□□ -0.43
C9orf3-204ENST00000424143 MGST1P10620 155 aaKnown RBP12.36□□□□□ -0.43
C9orf3-204ENST00000424143 MRPL54Q6P161 138 aaKnown RBP12.36□□□□□ -0.43
C9orf3-204ENST00000424143 Q6ZN92 141 aa12.36□□□□□ -0.43
C9orf3-204ENST00000424143 OR9G1Q8NH87 305 aa12.36□□□□□ -0.43
C9orf3-204ENST00000424143 VSTM2AQ8TAG5 236 aa12.36□□□□□ -0.43
C9orf3-204ENST00000424143 ZNF596Q8TC21 504 aa12.36□□□□□ -0.43
C9orf3-204ENST00000424143 ITLN1Q8WWA0 313 aa12.36□□□□□ -0.43
C9orf3-204ENST00000424143 TXN2Q99757 166 aa12.36□□□□□ -0.43
C9orf3-204ENST00000424143 ALKBH7Q9BT30 221 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-204ENST00000424143 PAXXQ9BUH6 204 aa12.36□□□□□ -0.43
C9orf3-204ENST00000424143 HINT2Q9BX68 163 aa12.36□□□□□ -0.43
C9orf3-204ENST00000424143 ZNF430Q9H8G1 570 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-204ENST00000424143 VCANP13611 3396 aa12.36□□□□□ -0.43
C9orf3-204ENST00000424143 TCRBV4S1A1TA0A5B7 111 aa12.35□□□□□ -0.43
C9orf3-204ENST00000424143 FAM231BA6NCW3 169 aa12.35□□□□□ -0.43
C9orf3-204ENST00000424143 H0YJW9 148 aa12.35□□□□□ -0.43
C9orf3-204ENST00000424143 CRXO43186 299 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-204ENST00000424143 FSTL3O95633 263 aa12.35□□□□□ -0.43
C9orf3-204ENST00000424143 SAA1P0DJI8 122 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-204ENST00000424143 PAX2Q02962 417 aa12.35□□□□□ -0.43
C9orf3-204ENST00000424143 SLAQ13239 276 aa12.35□□□□□ -0.43
C9orf3-204ENST00000424143 MMDQ15546 238 aa12.35□□□□□ -0.43
C9orf3-204ENST00000424143 KIAA1644Q3SXP7 199 aa12.35□□□□□ -0.43
C9orf3-204ENST00000424143 LINC00311Q8N616 119 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms