RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 RBPJQ06330 500 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 LDLRAD2Q5SZI1 272 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 OCC1Q8TAD7 63 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 A0A1W2PPR1 153 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 IGHV3-23P01764 117 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 TOLLIPQ9H0E2 274 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 IGHV3OR16-10A0A075B7F0 116 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 TRAV20A0A0B4J274 112 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 ZNF320A2RRD8 509 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 GRIFINA4D1Z8 144 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 SH2D7A6NKC9 451 aaPredicted RBP9.64□□□□□ -0.87
PTPRN-204ENST00000423636 LINC00587B1AMM8 73 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 MGST1P10620 155 aaKnown RBP9.64□□□□□ -0.87
PTPRN-204ENST00000423636 HES1Q14469 280 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 C9orf152Q5JTZ5 239 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 TEX36Q5VZQ5 186 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 PRR27Q6MZM9 219 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 DPPA3Q6W0C5 159 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 RNASE7Q9H1E1 156 aaKnown RBP9.64□□□□□ -0.87
PTPRN-204ENST00000423636 PRO1933Q9H354 126 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 ELOVL5Q9NYP7 299 aa9.64□□□□□ -0.87
PTPRN-204ENST00000423636 CGB1A6NKQ9 187 aa9.63□□□□□ -0.87
PTPRN-204ENST00000423636 LY86O95711 162 aa9.63□□□□□ -0.87
PTPRN-204ENST00000423636 IGHV1-8P0DP01 117 aa9.63□□□□□ -0.87
PTPRN-204ENST00000423636 APOBEC3AP31941 199 aaPredicted RBP9.63□□□□□ -0.87
PTPRN-204ENST00000423636 RND2P52198 227 aa9.63□□□□□ -0.87
PTPRN-204ENST00000423636 ADORA2A-AS1P86434 159 aa9.63□□□□□ -0.87
PTPRN-204ENST00000423636 CR1LQ2VPA4 569 aa9.63□□□□□ -0.87
PTPRN-204ENST00000423636 MIOXQ9UGB7 285 aa9.63□□□□□ -0.87
PTPRN-204ENST00000423636 GCHFRP30047 84 aa9.63□□□□□ -0.87
PTPRN-204ENST00000423636 ZNF672Q499Z4 452 aaPredicted RBP9.63□□□□□ -0.87
PTPRN-204ENST00000423636 Q71RC1 249 aaPredicted RBP9.63□□□□□ -0.87
PTPRN-204ENST00000423636 OR4X1Q8NH49 305 aa9.63□□□□□ -0.87
PTPRN-204ENST00000423636 SSBP3Q9BWW4 388 aaPredicted RBP9.63□□□□□ -0.87
PTPRN-204ENST00000423636 GNG5P63218 68 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 KIAA1644Q3SXP7 199 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 C11orf42Q8N5U0 333 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 OR5B12Q96R08 314 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 SERTAD4Q9NUC0 356 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 INSIG2Q9Y5U4 225 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 SELENOKQ9Y6D0 94 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 PPIAL4CA0A0B4J2A2 164 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 IGHV2-5P01817 119 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 MBP02144 154 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 PPIAL4GP0DN37 164 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 RNASE2P10153 161 aaKnown RBP9.62□□□□□ -0.87
PTPRN-204ENST00000423636 CASP6P55212 293 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 RPP30P78346 268 aaKnown RBP9.62□□□□□ -0.87
PTPRN-204ENST00000423636 SGMS2Q8NHU3 365 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 FOXA2Q9Y261 457 aaPredicted RBP9.62□□□□□ -0.87
PTPRN-204ENST00000423636 A0A1W2PPI3 338 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 LINC00869P0C866 280 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 SSX2Q16385 188 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 PYY3Q5JQD4 70 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 CYP2G1PQ6ZSU1 146 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 LINC01551Q86U37 167 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 OR1B1Q8NGR6 318 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 SLC25A33Q9BSK2 321 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 ZNF835Q9Y2P0 537 aa9.62□□□□□ -0.87
PTPRN-204ENST00000423636 VSTM5A8MXK1 200 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 C22orf46C9J442 243 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 UBE2CO00762 179 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 TMPRSS3P57727 454 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 RANP62826 216 aaKnown RBP9.61□□□□□ -0.87
PTPRN-204ENST00000423636 PRCDQ00LT1 54 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 PQLC2Q6ZP29 291 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 TIMM9Q9Y5J7 89 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 PIGBOS1A0A0B4J2F0 54 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 FOLR2P14207 255 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 VWC2Q2TAL6 325 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 C1orf174Q8IYL3 243 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 P2RX4Q99571 388 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 VKORC1Q9BQB6 163 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 JKAMPQ9P055 326 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 PRNDQ9UKY0 176 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 IGHV2-26A0A0B4J1V2 119 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 PPP5D1E7EU14 171 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 F6UZH7 168 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 K7EN84 100 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 S100A2P29034 98 aa9.61□□□□□ -0.87
PTPRN-204ENST00000423636 LSM4Q9Y4Z0 139 aaKnown RBP9.61□□□□□ -0.87
PTPRN-204ENST00000423636 CNIH1O95406 144 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 STAG3L2P0CL84 134 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 STAG3L3P0CL85 134 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 CBLN1P23435 193 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 PPOXP50336 477 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 MFAP2P55001 183 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 ZNF503Q96F45 646 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 GGACTQ9BVM4 153 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 UBTD1Q9HAC8 227 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 NGBQ9NPG2 151 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 MSRB2Q9Y3D2 182 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 NOTCH3Q9UM47 2321 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 PPP1R2P9O14990 202 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 ZNF833PQ6ZTB9 187 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 CENPVQ7Z7K6 275 aaPredicted RBP9.6□□□□□ -0.87
PTPRN-204ENST00000423636 OR5AU1Q8NGC0 362 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 OR4C13Q8NGP0 309 aa9.6□□□□□ -0.87
PTPRN-204ENST00000423636 METTL1Q9UBP6 276 aaKnown RBP9.6□□□□□ -0.87
PTPRN-204ENST00000423636 RAB4BP61018 213 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms