RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 IGHV3-74A0A0B4J1X5 117 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 NDUFA2O43678 99 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 NPPCP23582 126 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.39□□□□□ -0.91
TNC-203ENST00000423613 GDF15Q99988 308 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 SPANXA1Q9NS26 97 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 METRNQ9UJH8 293 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 ZNF638Q14966 1978 aaKnown RBP9.39□□□□□ -0.91
TNC-203ENST00000423613 ADAMTSL1Q8N6G6 1762 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 GAGE12JA6NER3 117 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 H7C1H1 209 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 GNG5P63218 68 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 GAGE1Q13065 139 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 GAGE4Q13068 117 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 GAGE5Q13069 117 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 GAGE6Q13070 117 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 C11orf44Q8N8P7 122 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 VGLL1Q99990 258 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 TRAV13-1A0A0B4J241 112 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 LINC00158P58513 81 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 FXYD7P58549 80 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 SRSF1Q07955 248 aaKnown RBP eCLIP9.39□□□□□ -0.91
TNC-203ENST00000423613 LY6DQ14210 128 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 TEX45Q8NA69 505 aa9.39□□□□□ -0.91
TNC-203ENST00000423613 SP7Q8TDD2 431 aaPredicted RBP9.39□□□□□ -0.91
TNC-203ENST00000423613 CD8AP01732 235 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 AZU1P20160 251 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 VDAC2P45880 294 aaPredicted RBP9.38□□□□□ -0.91
TNC-203ENST00000423613 FOCADQ5VW36 1801 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 SIPA1L3O60292 1781 aaPredicted RBP9.38□□□□□ -0.91
TNC-203ENST00000423613 TRPM6Q9BX84 2022 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 IGKV1D-42A0A075B6H8 117 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 LOC101059948A0A1B0GTJ6 334 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 CRPP02741 224 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 MPV17P39210 176 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 FDCSPQ8NFU4 85 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 SEPSECSQ9HD40 501 aaKnown RBP9.38□□□□□ -0.91
TNC-203ENST00000423613 C4orf51C9J302 202 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 PROB1E7EW31 1015 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 IFI27P40305 119 aaPredicted RBP9.38□□□□□ -0.91
TNC-203ENST00000423613 CSRP2Q16527 193 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 SUMO4Q6EEV6 95 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 CALYQ9NYX4 217 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 B5MCH6 92 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 B9A039 149 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 ZNF664Q8N3J9 261 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 DEFB104AQ8WTQ1 72 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 LINC01587Q99440 93 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 TRBV5-7A0A0A0MS05 114 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 IGHV3-49A0A0A0MS15 119 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 LTBRP36941 435 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 ATP5L2Q7Z4Y8 100 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 CHCHD1Q96BP2 118 aaKnown RBP9.38□□□□□ -0.91
TNC-203ENST00000423613 C19orf24Q9BVV8 132 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 CLEC7AQ9BXN2 247 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 LHFPL6Q9Y693 200 aa9.38□□□□□ -0.91
TNC-203ENST00000423613 PCM1Q15154 2024 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 ZNF646O15015 1829 aaPredicted RBP9.37□□□□□ -0.91
TNC-203ENST00000423613 NDUFC2O95298 119 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 CD69Q07108 199 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 C1orf100Q5SVJ3 147 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 TMEM74BQ9NUR3 256 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 TRGV2A0A075B6R0 118 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 H3BMM0 161 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 IGFBP2P18065 325 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 APOBEC3AP31941 199 aaPredicted RBP9.37□□□□□ -0.91
TNC-203ENST00000423613 MIR17HGQ75NE6 70 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 FBLIM1Q8WUP2 373 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 UBE2WQ96B02 151 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 A0A1W2PRE2 83 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 FAM90A26D6RGX4 464 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 PRB1P04280 392 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 ATP5IP56385 69 aaPredicted RBP9.37□□□□□ -0.91
TNC-203ENST00000423613 RBM3P98179 157 aaKnown RBP9.37□□□□□ -0.91
TNC-203ENST00000423613 SMIM20Q8N5G0 67 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 S4R3C0 116 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 NINQ8N4C6 2090 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 LAMB2P55268 1798 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 FAM231BA6NCW3 169 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 CD28P10747 220 aa9.37□□□□□ -0.91
TNC-203ENST00000423613 RPL32P62910 135 aaKnown RBP9.37□□□□□ -0.91
TNC-203ENST00000423613 PIN1P1O15428 100 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 CDKN1AP38936 164 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 FOXD3Q9UJU5 478 aaPredicted RBP9.36□□□□□ -0.91
TNC-203ENST00000423613 ARID1AO14497 2285 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.36□□□□□ -0.91
TNC-203ENST00000423613 NPIPB11E5RHQ5 1161 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 TMEM258P61165 79 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 TMEM42Q69YG0 159 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 GATAD1Q8WUU5 269 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 IFI27L1Q96BM0 104 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 DLEC1Q9Y238 1755 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 TRBV20-1A0A075B6N2 111 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 TRAV41A0A0B4J266 112 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 DLL3Q9NYJ7 618 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 PYY3Q5JQD4 70 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 EGR4Q05215 589 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 CD200R1LQ6Q8B3 271 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 SAP25Q8TEE9 199 aa9.36□□□□□ -0.91
TNC-203ENST00000423613 OR5P3Q8WZ94 311 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms