RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 OR6Q1Q8NGQ2 317 aa4.31□□□□□ -1.72
LINC00458-201ENST00000423442 OR51H1Q8NH63 302 aa4.31□□□□□ -1.72
LINC00458-201ENST00000423442 MYOZ3Q8TDC0 251 aa4.31□□□□□ -1.72
LINC00458-201ENST00000423442 ALX4Q9H161 411 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-201ENST00000423442 SLC2A9Q9NRM0 540 aa4.31□□□□□ -1.72
LINC00458-201ENST00000423442 FKBP11Q9NYL4 201 aa4.31□□□□□ -1.72
LINC00458-201ENST00000423442 RABL2AQ9UBK7 228 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-201ENST00000423442 RABL2BQ9UNT1 228 aa4.31□□□□□ -1.72
LINC00458-201ENST00000423442 ZNF256Q9Y2P7 627 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-201ENST00000423442 FBXO7Q9Y3I1 522 aa4.31□□□□□ -1.72
LINC00458-201ENST00000423442 ZNF320A2RRD8 509 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 GPR31O00270 319 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 RBFOX2O43251 390 aaKnown RBP eCLIP4.3□□□□□ -1.72
LINC00458-201ENST00000423442 SOX15O60248 233 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 HPGDSO60760 199 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 PGLYRP1O75594 196 aaPredicted RBP4.3□□□□□ -1.72
LINC00458-201ENST00000423442 KRASP01116 189 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 EIF4EP06730 217 aaKnown RBP4.3□□□□□ -1.72
LINC00458-201ENST00000423442 TRAPPC2P0DI81 140 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 TRAPPC2BP0DI82 140 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 SAA1P0DJI8 122 aaPredicted RBP4.3□□□□□ -1.72
LINC00458-201ENST00000423442 PGAM2P15259 253 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 HLA-GP17693 338 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 ELK1P19419 428 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 F2RP25116 425 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 GNRHRP30968 328 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 RCVRNP35243 200 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 HRH1P35367 487 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 LPAR6P43657 344 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 TMBIM6P55061 237 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 KRTAP10-12P60413 245 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 RPL30P62888 115 aaKnown RBP4.3□□□□□ -1.72
LINC00458-201ENST00000423442 RHOGP84095 191 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 FAM106AQ4KMX7 169 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 RNASE10Q5GAN6 216 aaKnown RBP4.3□□□□□ -1.72
LINC00458-201ENST00000423442 OR4A47Q6IF82 309 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 SPSB3Q6PJ21 355 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 ZNF818PQ6ZRF7 136 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 HSD17B13Q7Z5P4 300 aaPredicted RBP4.3□□□□□ -1.72
LINC00458-201ENST00000423442 TMEM217Q8N7C4 229 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 TMEM167AQ8TBQ9 72 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 ZFAND1Q8TCF1 268 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 DGCR14Q96DF8 476 aaKnown RBP4.3□□□□□ -1.72
LINC00458-201ENST00000423442 CXorf58Q96LI9 332 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 TMEM56Q96MV1 263 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 TSC22D3Q99576 134 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 HINT2Q9BX68 163 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 ZNF257Q9Y2Q1 563 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 SMAD5-AS1Q9Y6J3 95 aa4.3□□□□□ -1.72
LINC00458-201ENST00000423442 RYR1P21817 5038 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 PLECQ15149 4684 aaKnown RBP4.29□□□□□ -1.72
LINC00458-201ENST00000423442 CSMD3Q7Z407 3707 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 STARD9Q9P2P6 4700 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 IGHV4OR15-8A0A075B7B6 117 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 A0A087WW49 117 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 TRBV7-1A0A0A6YYK4 115 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 TRAV34A0A0B4J273 112 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 CCDC160A6NGH7 325 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 TRIM64CA6NLI5 447 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 UPK2O00526 184 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 RLN1P04808 185 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 RPL5P46777 297 aaKnown RBP4.29□□□□□ -1.72
LINC00458-201ENST00000423442 SYNJ2BPP57105 145 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 NDPQ00604 133 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 KLF5Q13887 457 aaPredicted RBP4.29□□□□□ -1.72
LINC00458-201ENST00000423442 CTF1Q16619 201 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 C15orf32Q32M92 178 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 SLC25A24Q6NUK1 477 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 ZNF343Q6P1L6 599 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 H2BFWTQ7Z2G1 175 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 GTSCR1Q86UQ5 136 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 CLVS1Q8IUQ0 354 aaPredicted RBP4.29□□□□□ -1.72
LINC00458-201ENST00000423442 SLC38A6Q8IZM9 456 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 PUSL1Q8N0Z8 303 aaKnown RBP4.29□□□□□ -1.72
LINC00458-201ENST00000423442 ADAD2Q8NCV1 583 aaKnown RBP4.29□□□□□ -1.72
LINC00458-201ENST00000423442 OR1L6Q8NGR2 347 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 OR1L8Q8NGR8 309 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 OR4A16Q8NH70 328 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 TERB2Q8NHR7 220 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 MUC7Q8TAX7 377 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 GPX8Q8TED1 209 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 RAB2BQ8WUD1 216 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 EEF1AKMT3Q96AZ1 226 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 MOB3AQ96BX8 217 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 DIRAS2Q96HU8 199 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 HRH4Q9H3N8 390 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 BET1LQ9NYM9 111 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 COMMD9Q9P000 198 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 EXTL2Q9UBQ6 330 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 PRNDQ9UKY0 176 aa4.29□□□□□ -1.72
LINC00458-201ENST00000423442 TRBV9A0A0B4J1U6 114 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 TEX13DA0A0J9YY54 714 aaPredicted RBP4.28□□□□□ -1.72
LINC00458-201ENST00000423442 TEX50A0A1B0GTY4 177 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 GAGE12JA6NER3 117 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 USP17L23D6RBM5 183 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 GGCTO75223 188 aaKnown RBP4.28□□□□□ -1.72
LINC00458-201ENST00000423442 OR2J3O76001 311 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 PRH1P02810 166 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 ZNF735P0CB33 412 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 GP9P14770 177 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms