RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 PVRIGQ6DKI7 326 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 SPSB3Q6PJ21 355 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 OR51S1Q8NGJ8 323 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 GLYATL2Q8WU03 294 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 MARC2Q969Z3 335 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 TMEM230Q96A57 120 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 CITED4Q96RK1 184 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 TMEM222Q9H0R3 208 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 NAA60Q9H7X0 242 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 TUBA4BQ9H853 241 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 SRD5A3Q9H8P0 318 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 EDA2RQ9HAV5 297 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 PALMDQ9NP74 551 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 SLC2A8Q9NY64 477 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 MRPL27Q9P0M9 148 aaKnown RBP11.58□□□□□ -0.56
SPC24-201ENST00000423327 UFC1Q9Y3C8 167 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 SACSQ9NZJ4 4579 aa11.58□□□□□ -0.56
SPC24-201ENST00000423327 OR11H12B2RN74 326 aa11.57□□□□□ -0.56
SPC24-201ENST00000423327 DISC1C4P0D8 188 aa11.57□□□□□ -0.56
SPC24-201ENST00000423327 ZNF207O43670 478 aaKnown RBP11.57□□□□□ -0.56
SPC24-201ENST00000423327 FCGR2BP31994 310 aaPredicted RBP11.57□□□□□ -0.56
SPC24-201ENST00000423327 SURF2Q15527 256 aaPredicted RBP11.57□□□□□ -0.56
SPC24-201ENST00000423327 MCFD2Q8NI22 146 aa11.57□□□□□ -0.56
SPC24-201ENST00000423327 MUC7Q8TAX7 377 aa11.57□□□□□ -0.56
SPC24-201ENST00000423327 SPATA25Q9BR10 227 aa11.57□□□□□ -0.56
SPC24-201ENST00000423327 DAZ1Q9NQZ3 744 aaKnown RBP11.57□□□□□ -0.56
SPC24-201ENST00000423327 LYSTQ99698 3801 aa11.56□□□□□ -0.56
SPC24-201ENST00000423327 CRYM-AS1A6NIL9 109 aa11.56□□□□□ -0.56
SPC24-201ENST00000423327 C3orf84H3BNL1 204 aa11.56□□□□□ -0.56
SPC24-201ENST00000423327 NOL3O60936 208 aaKnown RBP11.56□□□□□ -0.56
SPC24-201ENST00000423327 CDS2O95674 445 aa11.56□□□□□ -0.56
SPC24-201ENST00000423327 RNASE2P10153 161 aaKnown RBP11.56□□□□□ -0.56
SPC24-201ENST00000423327 AARDQ4LEZ3 155 aa11.56□□□□□ -0.56
SPC24-201ENST00000423327 TRIM63Q969Q1 353 aa11.56□□□□□ -0.56
SPC24-201ENST00000423327 HIPK2Q9H2X6 1198 aa11.56□□□□□ -0.56
SPC24-201ENST00000423327 PRR13Q9NZ81 148 aa11.56□□□□□ -0.56
SPC24-201ENST00000423327 RABL2AQ9UBK7 228 aaPredicted RBP11.56□□□□□ -0.56
SPC24-201ENST00000423327 RABL2BQ9UNT1 228 aa11.56□□□□□ -0.56
SPC24-201ENST00000423327 C14orf166Q9Y224 244 aaKnown RBP11.56□□□□□ -0.56
SPC24-201ENST00000423327 V9GYH0 126 aa11.56□□□□□ -0.56
SPC24-201ENST00000423327 TEX13DA0A0J9YY54 714 aaPredicted RBP11.55□□□□□ -0.56
SPC24-201ENST00000423327 B3GALNT1O75752 331 aa11.55□□□□□ -0.56
SPC24-201ENST00000423327 ETV6P41212 452 aa11.55□□□□□ -0.56
SPC24-201ENST00000423327 BSXQ3C1V8 233 aa11.55□□□□□ -0.56
SPC24-201ENST00000423327 CASC10Q5T4H9 136 aa11.55□□□□□ -0.56
SPC24-201ENST00000423327 SELENOHQ8IZQ5 122 aaKnown RBP11.55□□□□□ -0.56
SPC24-201ENST00000423327 SLC35G3Q8N808 338 aa11.55□□□□□ -0.56
SPC24-201ENST00000423327 PINX1Q96BK5 328 aaKnown RBP11.55□□□□□ -0.56
SPC24-201ENST00000423327 C20orf24Q9BUV8 137 aa11.55□□□□□ -0.56
SPC24-201ENST00000423327 FNDC4Q9H6D8 234 aaPredicted RBP11.55□□□□□ -0.56
SPC24-201ENST00000423327 MRPL36Q9P0J6 103 aaKnown RBP11.55□□□□□ -0.56
SPC24-201ENST00000423327 RSL24D1Q9UHA3 163 aaKnown RBP11.55□□□□□ -0.56
SPC24-201ENST00000423327 TRAV25A0A0B4J276 109 aa11.54□□□□□ -0.56
SPC24-201ENST00000423327 FABP12A6NFH5 140 aa11.54□□□□□ -0.56
SPC24-201ENST00000423327 IFNA17P01571 189 aa11.54□□□□□ -0.56
SPC24-201ENST00000423327 MFAP4P55083 255 aa11.54□□□□□ -0.56
SPC24-201ENST00000423327 ERHP84090 104 aaKnown RBP11.54□□□□□ -0.56
SPC24-201ENST00000423327 ZNF79Q15937 498 aa11.54□□□□□ -0.56
SPC24-201ENST00000423327 OR52B4Q8NGK2 314 aa11.54□□□□□ -0.56
SPC24-201ENST00000423327 RBPMSQ93062 196 aaKnown RBP11.54□□□□□ -0.56
SPC24-201ENST00000423327 GPR146Q96CH1 333 aa11.54□□□□□ -0.56
SPC24-201ENST00000423327 OR10C1Q96KK4 312 aa11.54□□□□□ -0.56
SPC24-201ENST00000423327 TXN2Q99757 166 aa11.54□□□□□ -0.56
SPC24-201ENST00000423327 PRRT1Q99946 306 aa11.54□□□□□ -0.56
SPC24-201ENST00000423327 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
SPC24-201ENST00000423327 C15orf62A8K5M9 175 aa11.53□□□□□ -0.56
SPC24-201ENST00000423327 K7EMT4 169 aa11.53□□□□□ -0.56
SPC24-201ENST00000423327 TSPAN4O14817 238 aa11.53□□□□□ -0.56
SPC24-201ENST00000423327 ATG12O94817 140 aa11.53□□□□□ -0.56
SPC24-201ENST00000423327 HOXA1P49639 335 aaPredicted RBP11.53□□□□□ -0.56
SPC24-201ENST00000423327 SUPT4H1P63272 117 aaKnown RBP11.53□□□□□ -0.56
SPC24-201ENST00000423327 KLF9Q13886 244 aaPredicted RBP11.53□□□□□ -0.56
SPC24-201ENST00000423327 TMEM187Q14656 261 aa11.53□□□□□ -0.56
SPC24-201ENST00000423327 SLC16A13Q7RTY0 426 aa11.53□□□□□ -0.56
SPC24-201ENST00000423327 RRNAD1Q96FB5 475 aaKnown RBP11.53□□□□□ -0.56
SPC24-201ENST00000423327 TMEM56-RWDD3S4R434 201 aa11.53□□□□□ -0.56
SPC24-201ENST00000423327 IGHV3-49A0A0A0MS15 119 aa11.52□□□□□ -0.57
SPC24-201ENST00000423327 NUPL2O15504 423 aaKnown RBP11.52□□□□□ -0.57
SPC24-201ENST00000423327 DHODHQ02127 395 aa11.52□□□□□ -0.57
SPC24-201ENST00000423327 MLANAQ16655 118 aa11.52□□□□□ -0.57
SPC24-201ENST00000423327 ODF3L2Q3SX64 289 aa11.52□□□□□ -0.57
SPC24-201ENST00000423327 TMEM268Q5VZI3 342 aa11.52□□□□□ -0.57
SPC24-201ENST00000423327 RBPMS2Q6ZRY4 209 aaKnown RBP11.52□□□□□ -0.57
SPC24-201ENST00000423327 FAM219AQ8IW50 185 aa11.52□□□□□ -0.57
SPC24-201ENST00000423327 RNASE11Q8TAA1 199 aaKnown RBP11.52□□□□□ -0.57
SPC24-201ENST00000423327 TMEM170AQ8WVE7 144 aa11.52□□□□□ -0.57
SPC24-201ENST00000423327 GALNT14Q96FL9 552 aa11.52□□□□□ -0.57
SPC24-201ENST00000423327 RNF2Q99496 336 aa11.52□□□□□ -0.57
SPC24-201ENST00000423327 SPAG8Q99932 426 aaPredicted RBP11.52□□□□□ -0.57
SPC24-201ENST00000423327 ZFAND3Q9H8U3 227 aa11.52□□□□□ -0.57
SPC24-201ENST00000423327 CACNG5Q9UF02 275 aa11.52□□□□□ -0.57
SPC24-201ENST00000423327 UBQLN2Q9UHD9 624 aa11.52□□□□□ -0.57
SPC24-201ENST00000423327 SMPXQ9UHP9 88 aa11.52□□□□□ -0.57
SPC24-201ENST00000423327 IGHV7-4-1A0A0J9YVY3 117 aa11.51□□□□□ -0.57
SPC24-201ENST00000423327 CHEK1O14757 476 aa11.51□□□□□ -0.57
SPC24-201ENST00000423327 GNG7O60262 68 aa11.51□□□□□ -0.57
SPC24-201ENST00000423327 SNCAP37840 140 aa11.51□□□□□ -0.57
SPC24-201ENST00000423327 RELQ04864 619 aaPredicted RBP11.51□□□□□ -0.57
SPC24-201ENST00000423327 CCDC190Q86UF4 302 aa11.51□□□□□ -0.57
SPC24-201ENST00000423327 OR52E5Q8NH55 327 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms