RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 ABHD14BQ96IU4 210 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 KLK5Q9Y337 293 aaPredicted RBP2.87□□□□□ -1.95
SYNE1-212ENST00000423061 MGAMO43451 1857 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 SHANK1Q9Y566 2161 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 NDUFA3O95167 84 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 TMEM262E9PQX1 116 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 F5H768 121 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 TNFSF11O14788 317 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 SYNGR2O43760 224 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 TNFRSF18Q9Y5U5 241 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 PI4KAP42356 2102 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 PDCD6O75340 191 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 FXYD7P58549 80 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 RPL31P62899 125 aaKnown RBP2.86□□□□□ -1.95
SYNE1-212ENST00000423061 UBE2L3P68036 154 aaKnown RBP2.86□□□□□ -1.95
SYNE1-212ENST00000423061 COX8AP10176 69 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 IL11RAQ14626 422 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 TMEM30CPA0ZSE6 113 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 HRKO00198 91 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 TBC1D28Q2M2D7 210 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 GAGE2AQ6NT46 116 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 UBALD2Q8IYN6 164 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 SMPXQ9UHP9 88 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 LINC00694P0DN24 101 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 EDN2P20800 178 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 TFF3Q07654 80 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 GTSCR1Q86UQ5 136 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 NPIPB3Q92617 1050 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 TP53TG3Q9ULZ0 132 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 IL15RAQ13261 267 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 KISS1Q15726 138 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 VN1R2Q8NFZ6 395 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 ACACAQ13085 2346 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 WIPF3A6NGB9 483 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 SMIM9A6NGZ8 99 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 LIPT2A6NK58 231 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 PGLYRP1O75594 196 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-212ENST00000423061 DNAJC30Q96LL9 226 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 KLF12Q9Y4X4 402 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 FOXI3A8MTJ6 420 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-212ENST00000423061 CDX4O14627 284 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-212ENST00000423061 IGHV3-7P01780 117 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 CSRP1P21291 193 aaKnown RBP2.86□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF726P1Q15940 193 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 PYGO2Q9BRQ0 406 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 A0A1W2PPC4 97 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 ZADH2Q8N4Q0 377 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 FAM60AQ9NP50 221 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 IL36RNQ9UBH0 155 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 J3KT08 172 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 KLRB1Q12918 225 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 MPC1Q9Y5U8 109 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 NTF4P34130 210 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 CCL7P80098 99 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 C1RLQ9NZP8 487 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 FKBP2P26885 142 aaKnown RBP2.86□□□□□ -1.95
SYNE1-212ENST00000423061 CTRLP40313 264 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 SRSF1Q07955 248 aaKnown RBP eCLIP2.86□□□□□ -1.95
SYNE1-212ENST00000423061 NBASA2RRP1 2371 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 H0YJW9 148 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 C12orf74Q32Q52 190 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 CCDC140Q96MF4 163 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 PRSS27Q9BQR3 290 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 TMEM160Q9NX00 188 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 LOC107984640A0A0U1RRK4 108 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 IZUMO1RA6ND01 250 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 QRFPP83859 136 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 DYNLRB1Q9NP97 96 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 REG1BP48304 166 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 UNC119Q13432 240 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 HOXA3O43365 443 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF793Q6ZN11 406 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 OXGR1Q96P68 337 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 H3BTX0 84 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 OR1C1Q15619 314 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 TIMM8AO60220 97 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-212ENST00000423061 PRB4P10163 310 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-212ENST00000423061 SCGB1D4Q6XE38 83 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 DNM1P46Q6ZS02 220 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 SDK2Q58EX2 2172 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 SPEM1Q8N4L4 309 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 RPEQ96AT9 228 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 DHRS3O75911 302 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 OR9G9P0C7N8 305 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 RRN3P1Q2M238 152 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 OR4C3Q8NH37 302 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 C18orf15Q96N68 181 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 CHCHD5Q9BSY4 110 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 CFHR5Q9BXR6 569 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 GNB1LQ9BYB4 327 aa2.86□□□□□ -1.95
SYNE1-212ENST00000423061 OR2H1Q9GZK4 316 aa2.85□□□□□ -1.95
SYNE1-212ENST00000423061 HEATR1Q9H583 2144 aaKnown RBP2.85□□□□□ -1.95
SYNE1-212ENST00000423061 NMSQ5H8A3 153 aa2.85□□□□□ -1.95
SYNE1-212ENST00000423061 OR1L4Q8NGR5 311 aa2.85□□□□□ -1.95
SYNE1-212ENST00000423061 ZDHHC16Q969W1 377 aa2.85□□□□□ -1.95
SYNE1-212ENST00000423061 IGLL5B9A064 214 aa2.85□□□□□ -1.95
SYNE1-212ENST00000423061 WNT2P09544 360 aa2.85□□□□□ -1.95
SYNE1-212ENST00000423061 OR10J3Q5JRS4 329 aa2.85□□□□□ -1.95
SYNE1-212ENST00000423061 HRCT1Q6UXD1 115 aa2.85□□□□□ -1.95
SYNE1-212ENST00000423061 VSTM2LQ96N03 204 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms