RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 SCO2A0A1W2PP80 73 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 PRSS46E5RG02 174 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 IGHV1-8P0DP01 117 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 CNTFRP26992 372 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 GALR1P47211 349 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 PSG5Q15238 335 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 ZNF833PQ6ZTB9 187 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 OR4C13Q8NGP0 309 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 OR1L8Q8NGR8 309 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 NABP2Q9BQ15 211 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 ZNF430Q9H8G1 570 aaPredicted RBP8.88□□□□□ -0.99
DDX56-203ENST00000421223 IGKV1OR2-108A0A075B7D4 117 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 TMEM250H0YL14 139 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 CD24P25063 80 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 CDX1P47902 265 aaPredicted RBP8.88□□□□□ -0.99
DDX56-203ENST00000421223 RND2P52198 227 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 LGALS4P56470 323 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 RHOBP62745 196 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 KLRB1Q12918 225 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 GAMTQ14353 236 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 GFI1BQ5VTD9 330 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 PCGF1Q9BSM1 259 aa8.88□□□□□ -0.99
DDX56-203ENST00000421223 CSMD1Q96PZ7 3565 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 CXorf1O96002 111 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 C1QTNF9P0C862 333 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 S100PP25815 95 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 ARF6P62330 175 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 TNXAQ16473 311 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 OSR1Q8TAX0 266 aaPredicted RBP8.87□□□□□ -0.99
DDX56-203ENST00000421223 FRZBQ92765 325 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 GGACTQ9BVM4 153 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 FKBP11Q9NYL4 201 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 INSIG2Q9Y5U4 225 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 SVEP1Q4LDE5 3571 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 PPIAL4CA0A0B4J2A2 164 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 HIST1H2BKO60814 126 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 HIST1H2BJP06899 126 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 PPIAL4GP0DN37 164 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 HIST1H2BOP23527 126 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 HIST1H2BBP33778 126 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 HIST1H2BDP58876 126 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 TAS2R60P59551 318 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 HIST1H2BCP62807 126 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 PLGLAQ15195 96 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 HIST2H2BEQ16778 126 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 ZNF672Q499Z4 452 aaPredicted RBP8.87□□□□□ -0.99
DDX56-203ENST00000421223 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.87□□□□□ -0.99
DDX56-203ENST00000421223 ZNF114Q8NC26 417 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 HIST1H2BHQ93079 126 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 MISP3Q96FF7 219 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 HIST1H2BNQ99877 126 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 HIST1H2BMQ99879 126 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 WASHC3Q9Y3C0 194 aa8.87□□□□□ -0.99
DDX56-203ENST00000421223 YTHDF2Q9Y5A9 579 aaKnown RBP8.87□□□□□ -0.99
DDX56-203ENST00000421223 TRGC1P0CF51 173 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 STAG3L2P0CL84 134 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 STAG3L3P0CL85 134 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 RNASE2P10153 161 aaKnown RBP8.86□□□□□ -0.99
DDX56-203ENST00000421223 GCHFRP30047 84 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 SSBP2P81877 361 aaPredicted RBP8.86□□□□□ -0.99
DDX56-203ENST00000421223 TMEM155Q4W5P6 130 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 OR5AN1Q8NGI8 311 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 NPIPB3Q92617 1050 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 TMEM186Q96B77 213 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 TMEM133Q9H2Q1 129 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 LINC00574Q9H8X3 128 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 BET1LQ9NYM9 111 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 RPH3ALQ9UNE2 315 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 LSM4Q9Y4Z0 139 aaKnown RBP8.86□□□□□ -0.99
DDX56-203ENST00000421223 SEC14L6B5MCN3 397 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 IGHV2-70P01814 119 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 BMI1P35226 326 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 PPOXP50336 477 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 WT1-ASQ06250 92 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 OR5B3Q8NH48 314 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 SLC35E1Q96K37 410 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 UHRF2Q96PU4 802 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 HILPDAQ9Y5L2 63 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 TRAV5A0A0B4J249 113 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 PHOX2AO14813 284 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 OR5G3P0C626 314 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 ADORA2A-AS1P86434 159 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 PNKDQ8N490 385 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 TMEM37Q8WXS4 190 aa8.86□□□□□ -0.99
DDX56-203ENST00000421223 USF1P22415 310 aaPredicted RBP8.85□□□□□ -0.99
DDX56-203ENST00000421223 POU2AF1Q16633 256 aa8.85□□□□□ -0.99
DDX56-203ENST00000421223 VMA21Q3ZAQ7 101 aa8.85□□□□□ -0.99
DDX56-203ENST00000421223 NEU1Q99519 415 aa8.85□□□□□ -0.99
DDX56-203ENST00000421223 ZNF257Q9Y2Q1 563 aa8.85□□□□□ -0.99
DDX56-203ENST00000421223 IGHV2-26A0A0B4J1V2 119 aa8.85□□□□□ -0.99
DDX56-203ENST00000421223 PPP5D1E7EU14 171 aa8.85□□□□□ -0.99
DDX56-203ENST00000421223 MT-CO2P00403 227 aa8.85□□□□□ -0.99
DDX56-203ENST00000421223 UCNP55089 124 aa8.85□□□□□ -0.99
DDX56-203ENST00000421223 ZNF90Q03938 601 aa8.85□□□□□ -0.99
DDX56-203ENST00000421223 TMEM144Q7Z5S9 345 aa8.85□□□□□ -0.99
DDX56-203ENST00000421223 RPEQ96AT9 228 aa8.85□□□□□ -0.99
DDX56-203ENST00000421223 KCNIP2Q9NS61 270 aa8.85□□□□□ -0.99
DDX56-203ENST00000421223 F6UZH7 168 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 PDE6DO43924 150 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 LINC00869P0C866 280 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms