RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 C6orf62Q9GZU0 229 aaPredicted RBP12.84□□□□□ -0.35
MSH6-203ENST00000420813 MAP6D1Q9H9H5 199 aa12.84□□□□□ -0.35
MSH6-203ENST00000420813 PTTG2Q9NZH5 202 aa12.84□□□□□ -0.35
MSH6-203ENST00000420813 MT-CO2P00403 227 aa12.83□□□□□ -0.36
MSH6-203ENST00000420813 TMBIM6P55061 237 aa12.83□□□□□ -0.36
MSH6-203ENST00000420813 RND3P61587 244 aa12.83□□□□□ -0.36
MSH6-203ENST00000420813 NCS1P62166 190 aa12.83□□□□□ -0.36
MSH6-203ENST00000420813 ERHP84090 104 aaKnown RBP12.83□□□□□ -0.36
MSH6-203ENST00000420813 EWSR1Q01844 656 aaKnown RBP eCLIP12.83□□□□□ -0.368e-9■■■■□ 26.1
MSH6-203ENST00000420813 PMS2P11Q13670 270 aa12.83□□□□□ -0.36
MSH6-203ENST00000420813 GPR107Q5VW38 600 aa12.83□□□□□ -0.36
MSH6-203ENST00000420813 TMEM217Q8N7C4 229 aa12.83□□□□□ -0.36
MSH6-203ENST00000420813 ZNF486Q96H40 463 aaPredicted RBP12.83□□□□□ -0.36
MSH6-203ENST00000420813 FUNDC2Q9BWH2 189 aa12.83□□□□□ -0.36
MSH6-203ENST00000420813 TRAV14DV4A0A0A6YYC5 116 aa12.82□□□□□ -0.36
MSH6-203ENST00000420813 GNG7O60262 68 aa12.82□□□□□ -0.36
MSH6-203ENST00000420813 YIF1AO95070 293 aa12.82□□□□□ -0.36
MSH6-203ENST00000420813 GABARAPO95166 117 aa12.82□□□□□ -0.36
MSH6-203ENST00000420813 RPL35AP18077 110 aaKnown RBP12.82□□□□□ -0.36
MSH6-203ENST00000420813 ELK1P19419 428 aa12.82□□□□□ -0.36
MSH6-203ENST00000420813 GINS3Q9BRX5 216 aa12.82□□□□□ -0.36
MSH6-203ENST00000420813 HPGDSO60760 199 aa12.81□□□□□ -0.36
MSH6-203ENST00000420813 CD5P06127 495 aa12.81□□□□□ -0.36
MSH6-203ENST00000420813 VBP1P61758 197 aa12.81□□□□□ -0.36
MSH6-203ENST00000420813 FAM90A2PQ658T7 463 aa12.81□□□□□ -0.36
MSH6-203ENST00000420813 CEMP1Q6PRD7 247 aaPredicted RBP12.81□□□□□ -0.36
MSH6-203ENST00000420813 LHFPL1Q86WI0 220 aa12.81□□□□□ -0.36
MSH6-203ENST00000420813 PINX1Q96BK5 328 aaKnown RBP12.81□□□□□ -0.36
MSH6-203ENST00000420813 INS-IGF2F8WCM5 200 aa12.8□□□□□ -0.36
MSH6-203ENST00000420813 H3BMQ9 156 aa12.8□□□□□ -0.36
MSH6-203ENST00000420813 M0QYG6 137 aa12.8□□□□□ -0.36
MSH6-203ENST00000420813 NPBWR1P48145 328 aa12.8□□□□□ -0.36
MSH6-203ENST00000420813 RORCP51449 518 aa12.8□□□□□ -0.36
MSH6-203ENST00000420813 APRG1Q8IVJ8 170 aa12.8□□□□□ -0.36
MSH6-203ENST00000420813 ARRDC1Q8N5I2 433 aa12.8□□□□□ -0.36
MSH6-203ENST00000420813 KLK5Q9Y337 293 aaPredicted RBP12.8□□□□□ -0.36
MSH6-203ENST00000420813 IGHV3-49A0A0A0MS15 119 aa12.79□□□□□ -0.36
MSH6-203ENST00000420813 MPTX1A8MV57 137 aa12.79□□□□□ -0.36
MSH6-203ENST00000420813 ATG12O94817 140 aa12.79□□□□□ -0.36
MSH6-203ENST00000420813 LY6G6CO95867 125 aa12.79□□□□□ -0.36
MSH6-203ENST00000420813 IGKV1-5P01602 117 aa12.79□□□□□ -0.36
MSH6-203ENST00000420813 IGHV3-48P01763 117 aa12.79□□□□□ -0.36
MSH6-203ENST00000420813 P0C879 139 aa12.79□□□□□ -0.36
MSH6-203ENST00000420813 PAFAH1B2P68402 229 aa12.79□□□□□ -0.36
MSH6-203ENST00000420813 RNASE10Q5GAN6 216 aaKnown RBP12.79□□□□□ -0.36
MSH6-203ENST00000420813 MZT2AQ6P582 158 aa12.79□□□□□ -0.36
MSH6-203ENST00000420813 DUSP18Q8NEJ0 188 aa12.79□□□□□ -0.36
MSH6-203ENST00000420813 GATAD1Q8WUU5 269 aa12.79□□□□□ -0.36
MSH6-203ENST00000420813 CSTL1Q9H114 145 aa12.79□□□□□ -0.36
MSH6-203ENST00000420813 CORTO00230 105 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 PGAM2P15259 253 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 TBPP20226 339 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 SNCAP37840 140 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 TFPI2P48307 235 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 AKR1C2P52895 323 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 PIGPP57054 158 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 PVRIGQ6DKI7 326 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 TOMM20LQ6UXN7 152 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 ZNF600Q6ZNG1 722 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 SLC35G3Q8N808 338 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 AP3S1Q92572 193 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 TP53RKQ96S44 253 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 NAA50Q9GZZ1 169 aaKnown RBP12.78□□□□□ -0.36
MSH6-203ENST00000420813 VSIRQ9H7M9 311 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 KLK11Q9UBX7 282 aa12.78□□□□□ -0.36
MSH6-203ENST00000420813 IGKV3-7A0A075B6H7 116 aa12.77□□□□□ -0.37
MSH6-203ENST00000420813 FAM25AB3EWG3 89 aa12.77□□□□□ -0.37
MSH6-203ENST00000420813 FAM25CB3EWG5 89 aa12.77□□□□□ -0.37
MSH6-203ENST00000420813 FAM25GB3EWG6 89 aa12.77□□□□□ -0.37
MSH6-203ENST00000420813 PI3P19957 117 aa12.77□□□□□ -0.37
MSH6-203ENST00000420813 ZNF124Q15973 351 aa12.77□□□□□ -0.37
MSH6-203ENST00000420813 IZUMO4Q1ZYL8 232 aa12.77□□□□□ -0.37
MSH6-203ENST00000420813 TCF24Q7RTU0 167 aa12.77□□□□□ -0.37
MSH6-203ENST00000420813 PDCD10Q9BUL8 212 aa12.77□□□□□ -0.37
MSH6-203ENST00000420813 ZFAND3Q9H8U3 227 aa12.77□□□□□ -0.37
MSH6-203ENST00000420813 MTFP1Q9UDX5 166 aa12.77□□□□□ -0.37
MSH6-203ENST00000420813 IGHV3OR16-13A0A075B7E8 117 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 IGHV3-74A0A0B4J1X5 117 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 TRAV2A0A0B4J234 112 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 A0A0B4J293 547 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 C3orf85A0A1B0GTC6 90 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 ST8SIA3O43173 380 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 DFFBO76075 338 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 IFNA17P01571 189 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 CD3DP04234 171 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 SUB1P53999 127 aaKnown RBP eCLIP12.76□□□□□ -0.37
MSH6-203ENST00000420813 SPINK9Q5DT21 86 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 GBGT1Q8N5D6 347 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 OR52I2Q8NH67 350 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 C15orf40Q8WUR7 153 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 ST8SIA2Q92186 375 aa12.76□□□□□ -0.37
MSH6-203ENST00000420813 PUS1Q9Y606 427 aaKnown RBP eCLIP12.76□□□□□ -0.37
MSH6-203ENST00000420813 AGRNO00468 2067 aa12.75□□□□□ -0.37
MSH6-203ENST00000420813 B3GALNT1O75752 331 aa12.75□□□□□ -0.37
MSH6-203ENST00000420813 TMEM50AO95807 157 aa12.75□□□□□ -0.37
MSH6-203ENST00000420813 ZNF182P17025 639 aaPredicted RBP12.75□□□□□ -0.37
MSH6-203ENST00000420813 CTF1Q16619 201 aa12.75□□□□□ -0.37
MSH6-203ENST00000420813 RNASE12Q5GAN4 147 aaKnown RBP12.75□□□□□ -0.37
MSH6-203ENST00000420813 CCDC71LQ8N9Z2 235 aa12.75□□□□□ -0.37
MSH6-203ENST00000420813 ZFAND1Q8TCF1 268 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms