RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 MYO9AB2RTY4 2548 aa4.75□□□□□ -1.65
HMGB3-202ENST00000419110 PMS2P5A8MQ11 134 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 NPIPB5A8MRT5 1133 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 ZNF705EA8MWA4 302 aaPredicted RBP4.74□□□□□ -1.65
HMGB3-202ENST00000419110 TEX22C9J3V5 150 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 PRSS46E5RG02 174 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 TEX46H3BTG2 121 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 CD5LO43866 347 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 ATP6V1G1O75348 118 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 GHRHP01286 108 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 REG1AP05451 166 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 NMBP08949 121 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 SPP1P10451 314 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 DEFA4P12838 97 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 AREGP15514 252 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 SRP14P37108 136 aaKnown RBP4.74□□□□□ -1.65
HMGB3-202ENST00000419110 SULT1A2P50226 295 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 ELLP55199 621 aaPredicted RBP4.74□□□□□ -1.65
HMGB3-202ENST00000419110 RAB2AP61019 212 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 BLOC1S1P78537 153 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 NDPQ00604 133 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 WT1-ASQ06250 92 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 CD69Q07108 199 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 ARL16Q0P5N6 197 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 PJVKQ0ZLH3 352 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 ECSCRQ19T08 205 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 FAM120AOSQ5T036 256 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 BTNL8Q6UX41 500 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 DPPA3Q6W0C5 159 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 Q6ZRG5 221 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 COMMD7Q86VX2 200 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 TMEM219Q86XT9 240 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 C5orf56Q8N8D9 126 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 Q8N9W7 124 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 OR2G3Q8NGZ4 309 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 OR1P1Q8NH06 330 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 FAM213BQ8TBF2 198 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 RBMXL1Q96E39 390 aaKnown RBP4.74□□□□□ -1.65
HMGB3-202ENST00000419110 SAT2Q96F10 170 aaPredicted RBP4.74□□□□□ -1.65
HMGB3-202ENST00000419110 MISP3Q96FF7 219 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 AJUBAQ96IF1 538 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 RITA1Q96K30 269 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 RBM14Q96PK6 669 aaKnown RBP4.74□□□□□ -1.65
HMGB3-202ENST00000419110 RSG1Q9BU20 258 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 NPCDR1Q9BY65 106 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 MRPL18Q9H0U6 180 aaKnown RBP4.74□□□□□ -1.65
HMGB3-202ENST00000419110 MEGF9Q9H1U4 602 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 ASH1LQ9NR48 2969 aaKnown RBP4.74□□□□□ -1.65
HMGB3-202ENST00000419110 VPREB3Q9UKI3 123 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 WDR83OSQ9Y284 106 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 F11RQ9Y624 299 aaKnown RBP4.74□□□□□ -1.65
HMGB3-202ENST00000419110 ITPR2Q14571 2701 aa4.74□□□□□ -1.65
HMGB3-202ENST00000419110 MDFIC2A0A1B0GVS7 189 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 A6NDX4 124 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 CGB1A6NKQ9 187 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 NUDT19A8MXV4 375 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 ATP6V0E1O15342 81 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 HBE1P02100 147 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 MBP02144 154 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 FABP1P07148 127 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 APELAP0DMC3 54 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 HIST1H1BP16401 226 aaKnown RBP4.73□□□□□ -1.65
HMGB3-202ENST00000419110 GPX4P36969 197 aaPredicted RBP4.73□□□□□ -1.65
HMGB3-202ENST00000419110 CX3CL1P78423 397 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 SSBP2P81877 361 aaPredicted RBP4.73□□□□□ -1.65
HMGB3-202ENST00000419110 SERF2P84101 59 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 LY6EQ16553 131 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 MRGPRG-AS1Q2M3A8 158 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 DEFB112Q30KQ8 113 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 FBLN7Q53RD9 439 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 TMEM41BQ5BJD5 291 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 C9orf152Q5JTZ5 239 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 FFAR4Q5NUL3 377 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 TEPPQ6URK8 271 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 ZNF562Q6V9R5 426 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 LFNGQ8NES3 379 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 FAM110DQ8TAY7 271 aaPredicted RBP4.73□□□□□ -1.65
HMGB3-202ENST00000419110 TMEM170AQ8WVE7 144 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 CACNG8Q8WXS5 425 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 ACY3Q96HD9 319 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 P2RX4Q99571 388 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 GGTLC1Q9BX51 225 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 NBPF19A0A087WUL8 3843 aa4.73□□□□□ -1.65
HMGB3-202ENST00000419110 PDZD2O15018 2839 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 ZANQ9Y493 2812 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 IGHV7-81A0A0B4J1V7 117 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 A0A1B0GW64 132 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 LINC00862A6NCI5 91 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 TSPAN15O95858 294 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 IGHV4-59P01825 116 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 CTRB1P17538 263 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 RND2P52198 227 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 ACOT6Q3I5F7 207 aaPredicted RBP4.72□□□□□ -1.65
HMGB3-202ENST00000419110 PXDC1Q5TGL8 231 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 CTRB2Q6GPI1 263 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 UNQ5815/PRO19632Q6UWF5 114 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 RBMS3Q6XE24 437 aaKnown RBP4.72□□□□□ -1.65
HMGB3-202ENST00000419110 IL34Q6ZMJ4 242 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 TMEM144Q7Z5S9 345 aa4.72□□□□□ -1.65
HMGB3-202ENST00000419110 SLC35E3Q7Z769 313 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms