RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 PLEKHA3Q9HB20 300 aa15.52■□□□□ 0.08
PKNOX1-202ENST00000418336 CYB5BO43169 146 aa15.51■□□□□ 0.07
PKNOX1-202ENST00000418336 ATG12O94817 140 aa15.51■□□□□ 0.07
PKNOX1-202ENST00000418336 RNASE2P10153 161 aaKnown RBP15.51■□□□□ 0.07
PKNOX1-202ENST00000418336 FAM219AQ8IW50 185 aa15.51■□□□□ 0.07
PKNOX1-202ENST00000418336 MCUBQ9NWR8 336 aa15.51■□□□□ 0.07
PKNOX1-202ENST00000418336 TECRQ9NZ01 308 aaKnown RBP15.51■□□□□ 0.07
PKNOX1-202ENST00000418336 SELENOKQ9Y6D0 94 aa15.51■□□□□ 0.07
PKNOX1-202ENST00000418336 MT-CO2P00403 227 aa15.5■□□□□ 0.07
PKNOX1-202ENST00000418336 SPSB3Q6PJ21 355 aa15.5■□□□□ 0.07
PKNOX1-202ENST00000418336 LINC00322Q6ZN03 302 aaPredicted RBP15.5■□□□□ 0.07
PKNOX1-202ENST00000418336 TMEM61Q8N0U2 210 aa15.5■□□□□ 0.07
PKNOX1-202ENST00000418336 UXS1Q8NBZ7 420 aa15.5■□□□□ 0.07
PKNOX1-202ENST00000418336 OR52E5Q8NH55 327 aa15.5■□□□□ 0.07
PKNOX1-202ENST00000418336 IL22RA2Q969J5 263 aa15.5■□□□□ 0.07
PKNOX1-202ENST00000418336 WDR89Q96FK6 387 aaPredicted RBP15.5■□□□□ 0.07
PKNOX1-202ENST00000418336 ZNF320A2RRD8 509 aa15.49■□□□□ 0.07
PKNOX1-202ENST00000418336 S100A5P33763 92 aa15.49■□□□□ 0.07
PKNOX1-202ENST00000418336 ELLP55199 621 aaPredicted RBP15.49■□□□□ 0.07
PKNOX1-202ENST00000418336 BAK1Q16611 211 aa15.49■□□□□ 0.07
PKNOX1-202ENST00000418336 NMSQ5H8A3 153 aa15.49■□□□□ 0.07
PKNOX1-202ENST00000418336 TMEM268Q5VZI3 342 aa15.49■□□□□ 0.07
PKNOX1-202ENST00000418336 TOMM5Q8N4H5 51 aa15.49■□□□□ 0.07
PKNOX1-202ENST00000418336 SLC35G3Q8N808 338 aa15.49■□□□□ 0.07
PKNOX1-202ENST00000418336 TMEM170AQ8WVE7 144 aa15.49■□□□□ 0.07
PKNOX1-202ENST00000418336 DEDD2Q8WXF8 326 aa15.49■□□□□ 0.07
PKNOX1-202ENST00000418336 MISP3Q96FF7 219 aa15.49■□□□□ 0.07
PKNOX1-202ENST00000418336 MRPL36Q9P0J6 103 aaKnown RBP15.49■□□□□ 0.07
PKNOX1-202ENST00000418336 RYR3Q15413 4870 aa15.49■□□□□ 0.07
PKNOX1-202ENST00000418336 NDUFA4O00483 81 aa15.48■□□□□ 0.07
PKNOX1-202ENST00000418336 IGHV3-48P01763 117 aa15.48■□□□□ 0.07
PKNOX1-202ENST00000418336 CD7P09564 240 aa15.48■□□□□ 0.07
PKNOX1-202ENST00000418336 ERHP84090 104 aaKnown RBP15.48■□□□□ 0.07
PKNOX1-202ENST00000418336 RRNAD1Q96FB5 475 aaKnown RBP15.48■□□□□ 0.07
PKNOX1-202ENST00000418336 TXN2Q99757 166 aa15.48■□□□□ 0.07
PKNOX1-202ENST00000418336 FNDC4Q9H6D8 234 aaPredicted RBP15.48■□□□□ 0.07
PKNOX1-202ENST00000418336 CACNG5Q9UF02 275 aa15.48■□□□□ 0.07
PKNOX1-202ENST00000418336 U3KQK5 164 aa15.48■□□□□ 0.07
PKNOX1-202ENST00000418336 IFNA17P01571 189 aa15.47■□□□□ 0.07
PKNOX1-202ENST00000418336 BTNL8Q6UX41 500 aa15.47■□□□□ 0.07
PKNOX1-202ENST00000418336 SGPP2Q8IWX5 399 aa15.47■□□□□ 0.07
PKNOX1-202ENST00000418336 DYNLRB2Q8TF09 96 aa15.47■□□□□ 0.07
PKNOX1-202ENST00000418336 OR10C1Q96KK4 312 aa15.47■□□□□ 0.07
PKNOX1-202ENST00000418336 TM2D3Q9BRN9 247 aa15.47■□□□□ 0.07
PKNOX1-202ENST00000418336 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.47■□□□□ 0.07
PKNOX1-202ENST00000418336 MRPL27Q9P0M9 148 aaKnown RBP15.47■□□□□ 0.07
PKNOX1-202ENST00000418336 UFC1Q9Y3C8 167 aa15.47■□□□□ 0.07
PKNOX1-202ENST00000418336 STARD9Q9P2P6 4700 aa15.47■□□□□ 0.07
PKNOX1-202ENST00000418336 AKR1C4P17516 323 aa15.46■□□□□ 0.07
PKNOX1-202ENST00000418336 AP3S2P59780 193 aa15.46■□□□□ 0.07
PKNOX1-202ENST00000418336 SPCS3P61009 180 aa15.46■□□□□ 0.07
PKNOX1-202ENST00000418336 Q56UQ5 140 aa15.46■□□□□ 0.07
PKNOX1-202ENST00000418336 LYZL2Q7Z4W2 148 aa15.46■□□□□ 0.07
PKNOX1-202ENST00000418336 UBAC2Q8NBM4 344 aa15.46■□□□□ 0.07
PKNOX1-202ENST00000418336 MARC2Q969Z3 335 aa15.46■□□□□ 0.07
PKNOX1-202ENST00000418336 SCGB3A2Q96PL1 93 aa15.46■□□□□ 0.07
PKNOX1-202ENST00000418336 WFDC10AQ9H1F0 79 aa15.46■□□□□ 0.07
PKNOX1-202ENST00000418336 FAUP35544 74 aaKnown RBP15.45■□□□□ 0.06
PKNOX1-202ENST00000418336 MFAP4P55083 255 aa15.45■□□□□ 0.06
PKNOX1-202ENST00000418336 MLANAQ16655 118 aa15.45■□□□□ 0.06
PKNOX1-202ENST00000418336 ZNF57Q68EA5 555 aaPredicted RBP15.45■□□□□ 0.06
PKNOX1-202ENST00000418336 NEURL2Q9BR09 285 aa15.45■□□□□ 0.06
PKNOX1-202ENST00000418336 PALMDQ9NP74 551 aa15.45■□□□□ 0.06
PKNOX1-202ENST00000418336 DAZ1Q9NQZ3 744 aaKnown RBP15.45■□□□□ 0.06
PKNOX1-202ENST00000418336 IGHV3OR16-8A0A075B7F1 116 aa15.44■□□□□ 0.06
PKNOX1-202ENST00000418336 A0A0B4J2A0 478 aa15.44■□□□□ 0.06
PKNOX1-202ENST00000418336 K7EMT4 169 aa15.44■□□□□ 0.06
PKNOX1-202ENST00000418336 BTCP35070 178 aa15.44■□□□□ 0.06
PKNOX1-202ENST00000418336 HOXA1P49639 335 aaPredicted RBP15.44■□□□□ 0.06
PKNOX1-202ENST00000418336 CD81P60033 236 aa15.44■□□□□ 0.06
PKNOX1-202ENST00000418336 ANKRD55Q3KP44 614 aa15.44■□□□□ 0.06
PKNOX1-202ENST00000418336 SPANXN2Q5MJ10 180 aa15.44■□□□□ 0.06
PKNOX1-202ENST00000418336 GTSCR1Q86UQ5 136 aa15.44■□□□□ 0.06
PKNOX1-202ENST00000418336 WWC2-AS2Q96NR7 200 aa15.44■□□□□ 0.06
PKNOX1-202ENST00000418336 SHPKQ9UHJ6 478 aa15.44■□□□□ 0.06
PKNOX1-202ENST00000418336 KCNIP3Q9Y2W7 256 aa15.44■□□□□ 0.06
PKNOX1-202ENST00000418336 LRTM2Q8N967 370 aa15.43■□□□□ 0.06
PKNOX1-202ENST00000418336 RNASE11Q8TAA1 199 aaKnown RBP15.43■□□□□ 0.06
PKNOX1-202ENST00000418336 PINX1Q96BK5 328 aaKnown RBP15.43■□□□□ 0.06
PKNOX1-202ENST00000418336 SLC25A21Q9BQT8 299 aaPredicted RBP15.43■□□□□ 0.06
PKNOX1-202ENST00000418336 C15orf62A8K5M9 175 aa15.42■□□□□ 0.06
PKNOX1-202ENST00000418336 PITX3O75364 302 aa15.42■□□□□ 0.06
PKNOX1-202ENST00000418336 SNCAP37840 140 aa15.42■□□□□ 0.06
PKNOX1-202ENST00000418336 HAGHQ16775 308 aa15.42■□□□□ 0.06
PKNOX1-202ENST00000418336 TMEM128Q5BJH2 165 aa15.42■□□□□ 0.06
PKNOX1-202ENST00000418336 DEFB125Q8N687 156 aa15.42■□□□□ 0.06
PKNOX1-202ENST00000418336 PDCD10Q9BUL8 212 aa15.42■□□□□ 0.06
PKNOX1-202ENST00000418336 ZFAND3Q9H8U3 227 aa15.42■□□□□ 0.06
PKNOX1-202ENST00000418336 GAR1Q9NY12 217 aaKnown RBP15.42■□□□□ 0.06
PKNOX1-202ENST00000418336 NDUFA13Q9P0J0 144 aa15.42■□□□□ 0.06
PKNOX1-202ENST00000418336 HSPB7Q9UBY9 170 aa15.42■□□□□ 0.06
PKNOX1-202ENST00000418336 CSMD3Q7Z407 3707 aa15.42■□□□□ 0.06
PKNOX1-202ENST00000418336 TRAV25A0A0B4J276 109 aa15.41■□□□□ 0.06
PKNOX1-202ENST00000418336 RBMY1BA6NDE4 496 aaKnown RBP15.41■□□□□ 0.06
PKNOX1-202ENST00000418336 RBMY1EA6NEQ0 496 aaKnown RBP15.41■□□□□ 0.06
PKNOX1-202ENST00000418336 ZNF207O43670 478 aaKnown RBP15.41■□□□□ 0.06
PKNOX1-202ENST00000418336 SCAF4O95104 1147 aaKnown RBP15.41■□□□□ 0.06
PKNOX1-202ENST00000418336 TMEM50AO95807 157 aa15.41■□□□□ 0.06
PKNOX1-202ENST00000418336 RBMY1DP0C7P1 496 aaKnown RBP15.41■□□□□ 0.06
PKNOX1-202ENST00000418336 CCR6P51684 374 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms