RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 SH2D7A6NKC9 451 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF8-203ENST00000417814 RND2P52198 227 aa10.88□□□□□ -0.67
TNFRSF8-203ENST00000417814 ATP6V1FQ16864 119 aa10.88□□□□□ -0.67
TNFRSF8-203ENST00000417814 SAPCD1Q5SSQ6 148 aa10.88□□□□□ -0.67
TNFRSF8-203ENST00000417814 Q6ZSR3 168 aa10.88□□□□□ -0.67
TNFRSF8-203ENST00000417814 Q6ZT83 130 aa10.88□□□□□ -0.67
TNFRSF8-203ENST00000417814 HARBI1Q96MB7 349 aa10.88□□□□□ -0.67
TNFRSF8-203ENST00000417814 TRAV1-1A0A0B4J248 108 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 PAX1P15863 534 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 ACP1P24666 158 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 C1orf194Q5T5A4 169 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 NPIPB3Q92617 1050 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 DIRC3C9JPN6 131 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 CDX4O14627 284 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 CCKARP32238 428 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 RAB7AP51149 207 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 SSBP2P81877 361 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 MMDQ15546 238 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 KRTAP27-1Q3LI81 207 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 MORN5Q5VZ52 161 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 C22orf34Q6ZV56 151 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 RNASE8Q8TDE3 154 aaKnown RBP10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 MBNL3Q9NUK0 354 aaKnown RBP10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 RNF24Q9Y225 148 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 WDR83OSQ9Y284 106 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 MRPS18CQ9Y3D5 142 aaKnown RBP10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 SORL1Q92673 2214 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 C2CD3Q4AC94 2353 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 CXorf1O96002 111 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 TPPP2P59282 170 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 FAM168AQ92567 244 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 VPS25Q9BRG1 176 aa10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 ZNF331Q9NQX6 463 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF8-203ENST00000417814 SLC25A17O43808 307 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 GFRA3O60609 400 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 MT-CO2P00403 227 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 ZNF138P52744 262 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 ERVK11-1P61568 191 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 RPEL1Q2QD12 228 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 Q6ZN92 141 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 K7EN84 100 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 COX7A2P2O60397 106 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 INO80CQ6PI98 192 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 OR4S2Q8NH73 311 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 SARAFQ96BY9 339 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 PDE6DO43924 150 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 HSBP1O75506 76 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 BPIFB3P59826 476 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 ACSF3Q4G176 576 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 LINC00596Q86U02 117 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 CISD2Q8N5K1 135 aaKnown RBP10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 WDR31Q8NA23 367 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 ELOVL5Q9NYP7 299 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 TBL2Q9Y4P3 447 aaKnown RBP10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 ARL2-SNX15V9GYD0 113 aa10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 USP9YO00507 2555 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF8-203ENST00000417814 SRRM4A7MD48 611 aaKnown RBP10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 IQCF6A8MYZ5 107 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 KLK10O43240 276 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 LINC00869P0C866 280 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 SP9P0CG40 484 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 USF1P22415 310 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 BRS3P32247 399 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 COL5A1-AS1Q5SY13 56 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 Q6ZWC4 215 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 GBGT1Q8N5D6 347 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 STARD4Q96DR4 205 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 RCHY1Q96PM5 261 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 SAP30LQ9HAJ7 183 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 K7EM74 188 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 FAM90A1Q86YD7 464 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 OR5B3Q8NH48 314 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 BORCS7Q96B45 105 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 GNB4Q9HAV0 340 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 TMEM210A6NLX4 147 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 LY6HO94772 140 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 ZPBPQ9BS86 351 aa10.85□□□□□ -0.67
TNFRSF8-203ENST00000417814 DSCAMO60469 2012 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 C21orf140B9A014 251 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 MGST3O14880 152 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 FXYD7P58549 80 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 RPL8P62917 257 aaKnown RBP10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 Q6ZS49 121 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 TCF24Q7RTU0 167 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 Q8NFD4 153 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 DYNLRB1Q9NP97 96 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 PMS2P5A8MQ11 134 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 SLC25A5P05141 298 aaKnown RBP10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 RELBQ01201 579 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 GAGE1Q13065 139 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 ACTL10Q5JWF8 245 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 IBA57Q5T440 356 aaKnown RBP10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 MDS2Q8NDY4 140 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 EAF1Q96JC9 268 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 ZNF586Q9NXT0 402 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 RNF114Q9Y508 228 aa10.84□□□□□ -0.67
TNFRSF8-203ENST00000417814 TRAV8-1A0A0A6YYK1 113 aa10.83□□□□□ -0.67
TNFRSF8-203ENST00000417814 CORTO00230 105 aa10.83□□□□□ -0.67
TNFRSF8-203ENST00000417814 HSPE1P61604 102 aaKnown RBP10.83□□□□□ -0.67
TNFRSF8-203ENST00000417814 MRPL20Q9BYC9 149 aaKnown RBP10.83□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms