RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 THYN1Q9P016 225 aa9.58□□□□□ -0.88
SKA1-203ENST00000417656 INS-IGF2F8WCM5 200 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 K7EIM0 57 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 ADAP1O75689 374 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 H2AFB2P0C5Z0 115 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 RNASE2P10153 161 aaKnown RBP9.57□□□□□ -0.88
SKA1-203ENST00000417656 GPR183P32249 361 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 SNCAP37840 140 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 TNFRSF9Q07011 255 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 RPEL1Q2QD12 228 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 PDLIM3Q53GG5 364 aaPredicted RBP9.57□□□□□ -0.88
SKA1-203ENST00000417656 GGNBP1Q5YKI7 109 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 OR1L6Q8NGR2 347 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 SEC22CQ9BRL7 303 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 ZC4H2Q9NQZ6 224 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 TMED3Q9Y3Q3 217 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 NOTCH3Q9UM47 2321 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 NOTCH1P46531 2555 aa9.57□□□□□ -0.88
SKA1-203ENST00000417656 TRBV7-1A0A0A6YYK4 115 aa9.56□□□□□ -0.88
SKA1-203ENST00000417656 A0A1B0GU03 582 aa9.56□□□□□ -0.88
SKA1-203ENST00000417656 ARL3P36405 182 aa9.56□□□□□ -0.88
SKA1-203ENST00000417656 SYNJ2BPP57105 145 aa9.56□□□□□ -0.88
SKA1-203ENST00000417656 FAM209BQ5JX69 171 aa9.56□□□□□ -0.88
SKA1-203ENST00000417656 KPRPQ5T749 579 aaPredicted RBP9.56□□□□□ -0.88
SKA1-203ENST00000417656 NRARPQ7Z6K4 114 aa9.56□□□□□ -0.88
SKA1-203ENST00000417656 VN1R17PQ8TDU5 208 aa9.56□□□□□ -0.88
SKA1-203ENST00000417656 SCARB1Q8WTV0 552 aa9.56□□□□□ -0.88
SKA1-203ENST00000417656 PINX1Q96BK5 328 aaKnown RBP9.56□□□□□ -0.88
SKA1-203ENST00000417656 GPR61Q9BZJ8 451 aa9.56□□□□□ -0.88
SKA1-203ENST00000417656 RBKSQ9H477 322 aa9.56□□□□□ -0.88
SKA1-203ENST00000417656 HEYLQ9NQ87 328 aaPredicted RBP9.56□□□□□ -0.88
SKA1-203ENST00000417656 HSPB7Q9UBY9 170 aa9.56□□□□□ -0.88
SKA1-203ENST00000417656 MEGF8Q7Z7M0 2845 aa9.55□□□□□ -0.88
SKA1-203ENST00000417656 MPTX1A8MV57 137 aa9.55□□□□□ -0.88
SKA1-203ENST00000417656 I3L2K1 104 aa9.55□□□□□ -0.88
SKA1-203ENST00000417656 PITX3O75364 302 aa9.55□□□□□ -0.88
SKA1-203ENST00000417656 MT-CO2P00403 227 aa9.55□□□□□ -0.88
SKA1-203ENST00000417656 IGHV3-48P01763 117 aa9.55□□□□□ -0.88
SKA1-203ENST00000417656 DEFA1P59665 94 aa9.55□□□□□ -0.88
SKA1-203ENST00000417656 DEFA3P59666 94 aa9.55□□□□□ -0.88
SKA1-203ENST00000417656 KLF5Q13887 457 aaPredicted RBP9.55□□□□□ -0.88
SKA1-203ENST00000417656 BSXQ3C1V8 233 aa9.55□□□□□ -0.88
SKA1-203ENST00000417656 C9orf66Q5T8R8 295 aa9.55□□□□□ -0.88
SKA1-203ENST00000417656 SLC24A4Q8NFF2 622 aa9.55□□□□□ -0.88
SKA1-203ENST00000417656 MITD1Q8WV92 249 aa9.55□□□□□ -0.88
SKA1-203ENST00000417656 C21orf62Q9NYP8 219 aa9.55□□□□□ -0.88
SKA1-203ENST00000417656 OR2T8A6NH00 312 aa9.54□□□□□ -0.88
SKA1-203ENST00000417656 F8W735 103 aaPredicted RBP9.54□□□□□ -0.88
SKA1-203ENST00000417656 TGOLN2O43493 480 aa9.54□□□□□ -0.88
SKA1-203ENST00000417656 GGCTO75223 188 aaKnown RBP9.54□□□□□ -0.88
SKA1-203ENST00000417656 SAP30O75446 220 aa9.54□□□□□ -0.88
SKA1-203ENST00000417656 PRB2P02812 416 aaPredicted RBP9.54□□□□□ -0.88
SKA1-203ENST00000417656 SLC25A6P12236 298 aa9.54□□□□□ -0.88
SKA1-203ENST00000417656 HTR2BP41595 481 aa9.54□□□□□ -0.88
SKA1-203ENST00000417656 DEFA6Q01524 100 aa9.54□□□□□ -0.88
SKA1-203ENST00000417656 Q56UQ5 140 aa9.54□□□□□ -0.88
SKA1-203ENST00000417656 PVRIGQ6DKI7 326 aa9.54□□□□□ -0.88
SKA1-203ENST00000417656 ACSM6Q6P461 480 aa9.54□□□□□ -0.88
SKA1-203ENST00000417656 UBAC2Q8NBM4 344 aa9.54□□□□□ -0.88
SKA1-203ENST00000417656 DTD1Q8TEA8 209 aa9.54□□□□□ -0.88
SKA1-203ENST00000417656 ZNF431Q8TF32 576 aaPredicted RBP9.54□□□□□ -0.88
SKA1-203ENST00000417656 CACFD1Q9UGQ2 172 aa9.54□□□□□ -0.88
SKA1-203ENST00000417656 CORTO00230 105 aa9.53□□□□□ -0.88
SKA1-203ENST00000417656 CCSO14618 274 aa9.53□□□□□ -0.88
SKA1-203ENST00000417656 OR2C1O95371 312 aa9.53□□□□□ -0.88
SKA1-203ENST00000417656 IFNA21P01568 189 aa9.53□□□□□ -0.88
SKA1-203ENST00000417656 CLEC3BP05452 202 aa9.53□□□□□ -0.88
SKA1-203ENST00000417656 IAPPP10997 89 aa9.53□□□□□ -0.88
SKA1-203ENST00000417656 NPY1RP25929 384 aa9.53□□□□□ -0.88
SKA1-203ENST00000417656 SUB1P53999 127 aaKnown RBP eCLIP9.53□□□□□ -0.88
SKA1-203ENST00000417656 KRTAP10-11P60412 298 aa9.53□□□□□ -0.88
SKA1-203ENST00000417656 HAPLN4Q86UW8 402 aa9.53□□□□□ -0.88
SKA1-203ENST00000417656 OR9G4Q8NGQ1 327 aa9.53□□□□□ -0.88
SKA1-203ENST00000417656 TMEM170AQ8WVE7 144 aa9.53□□□□□ -0.88
SKA1-203ENST00000417656 HIPK2Q9H2X6 1198 aa9.53□□□□□ -0.88
SKA1-203ENST00000417656 IGHV3-35A0A0C4DH35 117 aa9.52□□□□□ -0.89
SKA1-203ENST00000417656 FAM90A26D6RGX4 464 aa9.52□□□□□ -0.89
SKA1-203ENST00000417656 OPRK1P41145 380 aa9.52□□□□□ -0.89
SKA1-203ENST00000417656 EGFEM1PQ0D2K5 195 aa9.52□□□□□ -0.89
SKA1-203ENST00000417656 C2orf83Q53S99 150 aa9.52□□□□□ -0.89
SKA1-203ENST00000417656 PLET1Q6UQ28 207 aa9.52□□□□□ -0.89
SKA1-203ENST00000417656 UXS1Q8NBZ7 420 aa9.52□□□□□ -0.89
SKA1-203ENST00000417656 DUSP18Q8NEJ0 188 aa9.52□□□□□ -0.89
SKA1-203ENST00000417656 BSCL2Q96G97 398 aaPredicted RBP9.52□□□□□ -0.89
SKA1-203ENST00000417656 CHRDL1Q9BU40 450 aa9.52□□□□□ -0.89
SKA1-203ENST00000417656 ELOVL1Q9BW60 279 aa9.52□□□□□ -0.89
SKA1-203ENST00000417656 MAGT1Q9H0U3 335 aa9.52□□□□□ -0.89
SKA1-203ENST00000417656 FNDC4Q9H6D8 234 aaPredicted RBP9.52□□□□□ -0.89
SKA1-203ENST00000417656 IFNA10P01566 189 aa9.51□□□□□ -0.89
SKA1-203ENST00000417656 IL5P05113 134 aa9.51□□□□□ -0.89
SKA1-203ENST00000417656 SPNP16150 400 aa9.51□□□□□ -0.89
SKA1-203ENST00000417656 EDN2P20800 178 aa9.51□□□□□ -0.89
SKA1-203ENST00000417656 LORP23490 312 aaPredicted RBP9.51□□□□□ -0.89
SKA1-203ENST00000417656 ADMP35318 185 aa9.51□□□□□ -0.89
SKA1-203ENST00000417656 MFAP4P55083 255 aa9.51□□□□□ -0.89
SKA1-203ENST00000417656 TATDN3Q17R31 274 aa9.51□□□□□ -0.89
SKA1-203ENST00000417656 IAH1Q2TAA2 248 aaPredicted RBP9.51□□□□□ -0.89
SKA1-203ENST00000417656 IL34Q6ZMJ4 242 aa9.51□□□□□ -0.89
SKA1-203ENST00000417656 REC114Q7Z4M0 266 aa9.51□□□□□ -0.89
SKA1-203ENST00000417656 C12orf45Q8N5I9 185 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms