RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 IGHV3-74A0A0B4J1X5 117 aa16.09■□□□□ 0.17
ACTB-203ENST00000417101 LY6G6CO95867 125 aa16.09■□□□□ 0.17
ACTB-203ENST00000417101 ERHP84090 104 aaKnown RBP16.09■□□□□ 0.17
ACTB-203ENST00000417101 ZNF124Q15973 351 aa16.09■□□□□ 0.17
ACTB-203ENST00000417101 IZUMO4Q1ZYL8 232 aa16.09■□□□□ 0.17
ACTB-203ENST00000417101 SPINK9Q5DT21 86 aa16.09■□□□□ 0.17
ACTB-203ENST00000417101 C6orf62Q9GZU0 229 aaPredicted RBP16.09■□□□□ 0.17
ACTB-203ENST00000417101 TRAV14DV4A0A0A6YYC5 116 aa16.08■□□□□ 0.16
ACTB-203ENST00000417101 GNG7O60262 68 aa16.08■□□□□ 0.16
ACTB-203ENST00000417101 RNASE12Q5GAN4 147 aaKnown RBP16.08■□□□□ 0.16
ACTB-203ENST00000417101 CEMP1Q6PRD7 247 aaPredicted RBP16.08■□□□□ 0.16
ACTB-203ENST00000417101 PGAM2P15259 253 aa16.07■□□□□ 0.16
ACTB-203ENST00000417101 PI3P19957 117 aa16.07■□□□□ 0.16
ACTB-203ENST00000417101 GBGT1Q8N5D6 347 aa16.07■□□□□ 0.16
ACTB-203ENST00000417101 FAM25AB3EWG3 89 aa16.06■□□□□ 0.16
ACTB-203ENST00000417101 FAM25CB3EWG5 89 aa16.06■□□□□ 0.16
ACTB-203ENST00000417101 FAM25GB3EWG6 89 aa16.06■□□□□ 0.16
ACTB-203ENST00000417101 IGKV1-5P01602 117 aa16.06■□□□□ 0.16
ACTB-203ENST00000417101 ATF4P18848 351 aaPredicted RBP16.06■□□□□ 0.16
ACTB-203ENST00000417101 FAM90A2PQ658T7 463 aa16.06■□□□□ 0.16
ACTB-203ENST00000417101 TMEM217Q8N7C4 229 aa16.06■□□□□ 0.16
ACTB-203ENST00000417101 KLK11Q9UBX7 282 aa16.06■□□□□ 0.16
ACTB-203ENST00000417101 RORCP51449 518 aa16.05■□□□□ 0.16
ACTB-203ENST00000417101 CMC4P56277 68 aaPredicted RBP16.05■□□□□ 0.16
ACTB-203ENST00000417101 RND3P61587 244 aa16.05■□□□□ 0.16
ACTB-203ENST00000417101 RNASE10Q5GAN6 216 aaKnown RBP16.05■□□□□ 0.16
ACTB-203ENST00000417101 TOMM20LQ6UXN7 152 aa16.05■□□□□ 0.16
ACTB-203ENST00000417101 TCF24Q7RTU0 167 aa16.05■□□□□ 0.16
ACTB-203ENST00000417101 GINS3Q9BRX5 216 aa16.05■□□□□ 0.16
ACTB-203ENST00000417101 CSTL1Q9H114 145 aa16.05■□□□□ 0.16
ACTB-203ENST00000417101 MPTX1A8MV57 137 aa16.04■□□□□ 0.16
ACTB-203ENST00000417101 CD3DP04234 171 aa16.04■□□□□ 0.16
ACTB-203ENST00000417101 SNCAP37840 140 aa16.04■□□□□ 0.16
ACTB-203ENST00000417101 NPBWR1P48145 328 aa16.04■□□□□ 0.16
ACTB-203ENST00000417101 AKR1C2P52895 323 aa16.04■□□□□ 0.16
ACTB-203ENST00000417101 PIGPP57054 158 aa16.04■□□□□ 0.16
ACTB-203ENST00000417101 LHFPL1Q86WI0 220 aa16.04■□□□□ 0.16
ACTB-203ENST00000417101 SLC35G3Q8N808 338 aa16.04■□□□□ 0.16
ACTB-203ENST00000417101 DUSP18Q8NEJ0 188 aa16.04■□□□□ 0.16
ACTB-203ENST00000417101 ZNF486Q96H40 463 aaPredicted RBP16.04■□□□□ 0.16
ACTB-203ENST00000417101 TP53RKQ96S44 253 aa16.04■□□□□ 0.16
ACTB-203ENST00000417101 KLK5Q9Y337 293 aaPredicted RBP16.04■□□□□ 0.16
ACTB-203ENST00000417101 A0A0B4J293 547 aa16.03■□□□□ 0.16
ACTB-203ENST00000417101 IFNA17P01571 189 aa16.03■□□□□ 0.16
ACTB-203ENST00000417101 PAFAH1B2P68402 229 aa16.03■□□□□ 0.16
ACTB-203ENST00000417101 MZT2AQ6P582 158 aa16.03■□□□□ 0.16
ACTB-203ENST00000417101 OR52I2Q8NH67 350 aa16.03■□□□□ 0.16
ACTB-203ENST00000417101 ST8SIA2Q92186 375 aa16.03■□□□□ 0.16
ACTB-203ENST00000417101 KMT2AQ03164 3969 aa16.02■□□□□ 0.16
ACTB-203ENST00000417101 IGHV3-66A0A0C4DH42 116 aa16.02■□□□□ 0.16
ACTB-203ENST00000417101 ST8SIA3O43173 380 aa16.02■□□□□ 0.16
ACTB-203ENST00000417101 APOHP02749 345 aaPredicted RBP16.02■□□□□ 0.16
ACTB-203ENST00000417101 P0C879 139 aa16.02■□□□□ 0.16
ACTB-203ENST00000417101 LILRB2Q8N423 598 aa16.02■□□□□ 0.16
ACTB-203ENST00000417101 ARRDC1Q8N5I2 433 aa16.02■□□□□ 0.16
ACTB-203ENST00000417101 PUS1Q9Y606 427 aaKnown RBP eCLIP16.02■□□□□ 0.16
ACTB-203ENST00000417101 C3orf85A0A1B0GTC6 90 aa16.01■□□□□ 0.15
ACTB-203ENST00000417101 CD5P06127 495 aa16.01■□□□□ 0.15
ACTB-203ENST00000417101 PPP5CP53041 499 aa16.01■□□□□ 0.15
ACTB-203ENST00000417101 ZNF600Q6ZNG1 722 aa16.01■□□□□ 0.15
ACTB-203ENST00000417101 GATAD1Q8WUU5 269 aa16.01■□□□□ 0.15
ACTB-203ENST00000417101 RARRES2Q99969 163 aa16.01■□□□□ 0.15
ACTB-203ENST00000417101 VSIRQ9H7M9 311 aa16.01■□□□□ 0.15
ACTB-203ENST00000417101 ZFAND3Q9H8U3 227 aa16.01■□□□□ 0.15
ACTB-203ENST00000417101 EXTL2Q9UBQ6 330 aa16.01■□□□□ 0.15
ACTB-203ENST00000417101 MTFP1Q9UDX5 166 aa16.01■□□□□ 0.15
ACTB-203ENST00000417101 FRAS1Q86XX4 4008 aa16■□□□□ 0.15
ACTB-203ENST00000417101 INS-IGF2F8WCM5 200 aa16■□□□□ 0.15
ACTB-203ENST00000417101 DFFBO76075 338 aa16■□□□□ 0.15
ACTB-203ENST00000417101 ATG12O94817 140 aa16■□□□□ 0.15
ACTB-203ENST00000417101 TMEM50AO95807 157 aa16■□□□□ 0.15
ACTB-203ENST00000417101 ETV6P41212 452 aa16■□□□□ 0.15
ACTB-203ENST00000417101 RPL11P62913 178 aaKnown RBP16■□□□□ 0.15
ACTB-203ENST00000417101 TRIM16LQ309B1 348 aa16■□□□□ 0.15
ACTB-203ENST00000417101 SP6Q3SY56 376 aa16■□□□□ 0.15
ACTB-203ENST00000417101 PHLDA1Q8WV24 401 aaPredicted RBP16■□□□□ 0.15
ACTB-203ENST00000417101 AP3S1Q92572 193 aa16■□□□□ 0.15
ACTB-203ENST00000417101 PDCD10Q9BUL8 212 aa16■□□□□ 0.15
ACTB-203ENST00000417101 NAA50Q9GZZ1 169 aaKnown RBP16■□□□□ 0.15
ACTB-203ENST00000417101 MS4A6AQ9H2W1 248 aa16■□□□□ 0.15
ACTB-203ENST00000417101 COPZ2Q9P299 210 aa16■□□□□ 0.15
ACTB-203ENST00000417101 A0A1B0GU03 582 aa15.99■□□□□ 0.15
ACTB-203ENST00000417101 DNASE2O00115 360 aaPredicted RBP15.99■□□□□ 0.15
ACTB-203ENST00000417101 RNASE2P10153 161 aaKnown RBP15.99■□□□□ 0.15
ACTB-203ENST00000417101 TBPP20226 339 aa15.99■□□□□ 0.15
ACTB-203ENST00000417101 HOXA1P49639 335 aaPredicted RBP15.99■□□□□ 0.15
ACTB-203ENST00000417101 SUB1P53999 127 aaKnown RBP eCLIP15.99■□□□□ 0.15
ACTB-203ENST00000417101 PVRIGQ6DKI7 326 aa15.99■□□□□ 0.15
ACTB-203ENST00000417101 OR4D10Q8NGI6 311 aa15.99■□□□□ 0.15
ACTB-203ENST00000417101 ABHD1Q96SE0 405 aa15.99■□□□□ 0.15
ACTB-203ENST00000417101 ZNF182P17025 639 aaPredicted RBP15.98■□□□□ 0.15
ACTB-203ENST00000417101 DEFB131AP59861 70 aa15.98■□□□□ 0.15
ACTB-203ENST00000417101 CTF1Q16619 201 aa15.98■□□□□ 0.15
ACTB-203ENST00000417101 SCGB2B2Q4G0G5 96 aa15.98■□□□□ 0.15
ACTB-203ENST00000417101 LEMD1Q68G75 181 aa15.98■□□□□ 0.15
ACTB-203ENST00000417101 CCDC71LQ8N9Z2 235 aa15.98■□□□□ 0.15
ACTB-203ENST00000417101 OR13C8Q8NGS7 320 aa15.98■□□□□ 0.15
ACTB-203ENST00000417101 OR11H2Q8NH07 326 aa15.98■□□□□ 0.15
ACTB-203ENST00000417101 TERB2Q8NHR7 220 aa15.98■□□□□ 0.15
ACTB-203ENST00000417101 ZFAND1Q8TCF1 268 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms