RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 LINC00322Q6ZN03 302 aaPredicted RBP9.76□□□□□ -0.85
LINC00339-202ENST00000416769 Q6ZRM9 215 aa9.76□□□□□ -0.85
LINC00339-202ENST00000416769 TUBA4BQ9H853 241 aa9.76□□□□□ -0.85
LINC00339-202ENST00000416769 RANGRFQ9HD47 186 aaPredicted RBP9.76□□□□□ -0.85
LINC00339-202ENST00000416769 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.76□□□□□ -0.85
LINC00339-202ENST00000416769 COA4Q9NYJ1 87 aa9.76□□□□□ -0.85
LINC00339-202ENST00000416769 PRNDQ9UKY0 176 aa9.76□□□□□ -0.85
LINC00339-202ENST00000416769 C13orf42A0A1B0GVH6 325 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 RBMY1BA6NDE4 496 aaKnown RBP9.75□□□□□ -0.85
LINC00339-202ENST00000416769 RBMY1EA6NEQ0 496 aaKnown RBP9.75□□□□□ -0.85
LINC00339-202ENST00000416769 ADAP1O75689 374 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 JTBO76095 146 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 ACTL6BO94805 426 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 CD7P09564 240 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 RBMY1DP0C7P1 496 aaKnown RBP9.75□□□□□ -0.85
LINC00339-202ENST00000416769 SULT1A3P0DMM9 295 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 SULT1A4P0DMN0 295 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 SMCO1Q147U7 214 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 DEFB125Q8N687 156 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 SPIN2AQ99865 258 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 SPIN2BQ9BPZ2 258 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 SLA2Q9H6Q3 261 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 CACFD1Q9UGQ2 172 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 NSG2Q9Y328 171 aa9.75□□□□□ -0.85
LINC00339-202ENST00000416769 TEX50A0A1B0GTY4 177 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 C15orf61A6NNL5 157 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 SSNA1O43805 119 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 PITX3O75364 302 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 CNIH1O95406 144 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 PRH1P02810 166 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 ZP3P21754 424 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 HSPE1P61604 102 aaKnown RBP9.74□□□□□ -0.85
LINC00339-202ENST00000416769 TNXAQ16473 311 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 IZUMO4Q1ZYL8 232 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 AARDQ4LEZ3 155 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 OR52E5Q8NH55 327 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 COMMD5Q9GZQ3 224 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 TMEM14BQ9NUH8 114 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 CACNG5Q9UF02 275 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 ZNF257Q9Y2Q1 563 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 OR51B2Q9Y5P1 312 aa9.74□□□□□ -0.85
LINC00339-202ENST00000416769 HERC2O95714 4834 aa9.73□□□□□ -0.85
LINC00339-202ENST00000416769 RPL27AP46776 148 aaKnown RBP9.73□□□□□ -0.85
LINC00339-202ENST00000416769 CD81P60033 236 aa9.73□□□□□ -0.85
LINC00339-202ENST00000416769 CD300EQ496F6 205 aaPredicted RBP9.73□□□□□ -0.85
LINC00339-202ENST00000416769 THOC7Q6I9Y2 204 aaKnown RBP9.73□□□□□ -0.85
LINC00339-202ENST00000416769 GSG1LQ6UXU4 331 aa9.73□□□□□ -0.85
LINC00339-202ENST00000416769 OR1L8Q8NGR8 309 aa9.73□□□□□ -0.85
LINC00339-202ENST00000416769 OR5B3Q8NH48 314 aa9.73□□□□□ -0.85
LINC00339-202ENST00000416769 OR10C1Q96KK4 312 aa9.73□□□□□ -0.85
LINC00339-202ENST00000416769 C2orf50Q96LR7 162 aa9.73□□□□□ -0.85
LINC00339-202ENST00000416769 TMEM68Q96MH6 324 aa9.73□□□□□ -0.85
LINC00339-202ENST00000416769 MED28Q9H204 178 aa9.73□□□□□ -0.85
LINC00339-202ENST00000416769 C5orf51A6NDU8 294 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 MSGN1A6NI15 193 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 MPTX1A8MV57 137 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 E7EUB6 86 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 BMPR1BO00238 502 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 ST8SIA3O43173 380 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 TRAPPC2P0DI81 140 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 TRAPPC2BP0DI82 140 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 RRAS2P62070 204 aaPredicted RBP9.72□□□□□ -0.85
LINC00339-202ENST00000416769 IAH1Q2TAA2 248 aaPredicted RBP9.72□□□□□ -0.85
LINC00339-202ENST00000416769 ZNF343Q6P1L6 599 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 C19orf35Q6ZS72 473 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 GTSCR1Q86UQ5 136 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 OR1S1Q8NH92 325 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 SRSF12Q8WXF0 261 aaKnown RBP9.72□□□□□ -0.85
LINC00339-202ENST00000416769 SRSF8Q9BRL6 282 aaKnown RBP9.72□□□□□ -0.85
LINC00339-202ENST00000416769 PDCD10Q9BUL8 212 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 QTRT1Q9BXR0 403 aaKnown RBP9.72□□□□□ -0.85
LINC00339-202ENST00000416769 NDUFA4L2Q9NRX3 87 aa9.72□□□□□ -0.85
LINC00339-202ENST00000416769 PEF1Q9UBV8 284 aaKnown RBP9.72□□□□□ -0.85
LINC00339-202ENST00000416769 CGB1A6NKQ9 187 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 ZNF785A8K8V0 405 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 FAM25EA8MYX2 175 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 FAM90A26D6RGX4 464 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 CCSO14618 274 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 GOSR2O14653 212 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 IFNA17P01571 189 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 MYOD1P15172 320 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 OR2B8PP59922 312 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 SPCS3P61009 180 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 CYCSP99999 105 aaKnown RBP9.71□□□□□ -0.86
LINC00339-202ENST00000416769 EWSR1Q01844 656 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINC00339-202ENST00000416769 ID3Q02535 119 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 LCN12Q6JVE5 192 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 HSD17B13Q7Z5P4 300 aaPredicted RBP9.71□□□□□ -0.86
LINC00339-202ENST00000416769 ZBTB8BQ8NAP8 495 aaPredicted RBP9.71□□□□□ -0.86
LINC00339-202ENST00000416769 OR4D5Q8NGN0 318 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 NEURL2Q9BR09 285 aa9.71□□□□□ -0.86
LINC00339-202ENST00000416769 HMX3A6NHT5 357 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 INS-IGF2F8WCM5 200 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 H3BUA1 57 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 MED6O75586 246 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 PRCDQ00LT1 54 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 IL15RAQ13261 267 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 FCN2Q15485 313 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 RPEL1Q2QD12 228 aa9.7□□□□□ -0.86
LINC00339-202ENST00000416769 C10orf55Q5SWW7 151 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms