RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 SCAF4O95104 1147 aaKnown RBP8.53□□□□□ -1.04
SMPD4P1-201ENST00000416717 CNIH1O95406 144 aa8.53□□□□□ -1.04
SMPD4P1-201ENST00000416717 CEBPGP53567 150 aa8.53□□□□□ -1.04
SMPD4P1-201ENST00000416717 BSXQ3C1V8 233 aa8.53□□□□□ -1.04
SMPD4P1-201ENST00000416717 RUSC1-AS1Q66K80 236 aa8.53□□□□□ -1.04
SMPD4P1-201ENST00000416717 DPPA3Q6W0C5 159 aa8.53□□□□□ -1.04
SMPD4P1-201ENST00000416717 OR2T6Q8NHC8 308 aa8.53□□□□□ -1.04
SMPD4P1-201ENST00000416717 ACY3Q96HD9 319 aa8.53□□□□□ -1.04
SMPD4P1-201ENST00000416717 P2RX4Q99571 388 aa8.53□□□□□ -1.04
SMPD4P1-201ENST00000416717 GGACTQ9BVM4 153 aa8.53□□□□□ -1.04
SMPD4P1-201ENST00000416717 GGTLC1Q9BX51 225 aa8.53□□□□□ -1.04
SMPD4P1-201ENST00000416717 MAP1LC3BQ9GZQ8 125 aa8.53□□□□□ -1.04
SMPD4P1-201ENST00000416717 IGHV3-21A0A0B4J1V1 117 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 TRAV20A0A0B4J274 112 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 IGLC7A0M8Q6 106 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 RBFOX3A6NFN3 312 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 NCBP2LA6PVI3 153 aaKnown RBP8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 NDUFS8O00217 210 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 NBR2O15453 112 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 FBP1P09467 338 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 OPRK1P41145 380 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 COMPP49747 757 aaPredicted RBP8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 UBE2E1P51965 193 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 GAMTQ14353 236 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 PEA15Q15121 130 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 TEPPQ6URK8 271 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 COMMD1Q8N668 190 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 LFNGQ8NES3 379 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 MISP3Q96FF7 219 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 FAM103A1Q9BTL3 118 aaKnown RBP8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 PBDC1Q9BVG4 233 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 TMPRSS5Q9H3S3 457 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 KIAA1456Q9P272 454 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 PXMP4Q9Y6I8 212 aa8.52□□□□□ -1.04
SMPD4P1-201ENST00000416717 CSPG4Q6UVK1 2322 aa8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 HBE1P02100 147 aa8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 GATA2P23769 480 aaPredicted RBP8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 SSBP2P81877 361 aaPredicted RBP8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 CLEC12BQ2HXU8 276 aa8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 FAM120AOSQ5T036 256 aa8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 MINOS1Q5TGZ0 78 aa8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 HIST2H2BCQ6DN03 193 aa8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 CCDC144NLQ6NUI1 221 aa8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 BRD3OSQ6XYD6 125 aa8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 PIP4P2Q8N4L2 257 aa8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 MAPK1IP1LQ8NDC0 245 aa8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 RXFP4Q8TDU9 374 aa8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 ABHD5Q8WTS1 349 aa8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 SRSF12Q8WXF0 261 aaKnown RBP8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 MINOS1-NBL1R4GNA1 71 aa8.52□□□□□ -1.05
SMPD4P1-201ENST00000416717 IGKV1OR2-108A0A075B7D4 117 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 CENPVL3A0A0U1RRI6 287 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 MPDU1O75352 247 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 YIF1AO95070 293 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 CD69Q07108 199 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 ACOT6Q3I5F7 207 aaPredicted RBP8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 OR2T10Q8NGZ9 312 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 RAB24Q969Q5 203 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 NKX6-2Q9C056 277 aaPredicted RBP8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 FNDC4Q9H6D8 234 aaPredicted RBP8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 LSM4Q9Y4Z0 139 aaKnown RBP8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 TRAV40A0A0B4J280 105 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 BTBD17A6NE02 478 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 NPFFO15130 113 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 MBP02144 154 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 TMEM11P17152 192 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 SUB1P53999 127 aaKnown RBP eCLIP8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 MFAP2P55001 183 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 HABP2Q14520 560 aaPredicted RBP8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 AKIRIN2Q53H80 203 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 SLC16A13Q7RTY0 426 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 STPG3Q8N7X2 389 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 MBD3L1Q8WWY6 194 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 AJUBAQ96IF1 538 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 RNF5Q99942 180 aa8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 ACTR3CQ9C0K3 210 aaPredicted RBP8.51□□□□□ -1.05
SMPD4P1-201ENST00000416717 TEX22C9J3V5 150 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 OR10J1P30954 320 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 CDC34P49427 236 aaPredicted RBP8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 PAX8Q06710 450 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 RAB31Q13636 194 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 NANPQ8TBE9 248 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 SEC11CQ9BY50 192 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 BIN3Q9NQY0 253 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 MRPL36Q9P0J6 103 aaKnown RBP8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 TBL2Q9Y4P3 447 aaKnown RBP8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 CTXND1A0A1B0GTU2 59 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 A0A1W2PPV4 95 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 INS-IGF2F8WCM5 200 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 CYB5BO43169 146 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 MAS1LP35410 378 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 ICAM4Q14773 271 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 FXYD3Q14802 87 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 C5orf64Q2M2E5 130 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 TMEM144Q7Z5S9 345 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 GATAD1Q8WUU5 269 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 NPIPB3Q92617 1050 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 MALSU1Q96EH3 234 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 SLC35E1Q96K37 410 aa8.5□□□□□ -1.05
SMPD4P1-201ENST00000416717 SOX21Q9Y651 276 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms